Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D13
         (577 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16 pro...    24   0.81 
AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3 prot...    24   0.81 
DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9 prot...    24   1.1  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    24   1.1  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    24   1.1  
AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle nu...    24   1.1  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        23   1.9  
AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase ...    22   4.3  
AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase ...    22   4.3  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    21   5.7  
AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical pro...    21   5.7  
DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory pro...    21   7.5  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    21   7.5  
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    21   9.9  
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    21   9.9  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    21   9.9  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    21   9.9  
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    21   9.9  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.9  
AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    21   9.9  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   9.9  

>AY873915-1|AAW67571.2|  384|Tribolium castaneum chitinase 16
           protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 146 DVILGITEAYKKDTHPNKVNLGVGAY 223
           +V  GI     +   P+K+NLG+G+Y
Sbjct: 240 NVAAGIQYWLDEGAPPSKINLGLGSY 265


>AY873914-1|AAW67570.1|  384|Tribolium castaneum chitinase 3
           protein.
          Length = 384

 Score = 24.2 bits (50), Expect = 0.81
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 146 DVILGITEAYKKDTHPNKVNLGVGAY 223
           +V  GI     +   P+K+NLG+G+Y
Sbjct: 240 NVAAGIQYWLDEGAPPSKINLGLGSY 265


>DQ659249-1|ABG47447.1|  383|Tribolium castaneum chitinase 9
           protein.
          Length = 383

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = +2

Query: 146 DVILGITEAYKKDTHPNKVNLGVGAY 223
           +V  GI     +   P+K+NLG+G Y
Sbjct: 239 NVAAGIQYWLDEGAPPSKINLGLGTY 264


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 23  AQALKKLTTQVLKNNNIDYFVGCTALRASSTWWSN 127
           AQA   +   +++NN   Y +  + +  S  WW N
Sbjct: 226 AQASSFVVWPLVENNPTLYLIPVSVILISVGWWEN 260


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 10/35 (28%), Positives = 17/35 (48%)
 Frame = +2

Query: 23  AQALKKLTTQVLKNNNIDYFVGCTALRASSTWWSN 127
           AQA   +   +++NN   Y +  + +  S  WW N
Sbjct: 226 AQASSFVVWPLVENNPTLYLIPVSVILISVGWWEN 260


>AM295014-1|CAL25729.1|  407|Tribolium castaneum ultraspiracle
           nuclear receptor protein.
          Length = 407

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = +2

Query: 152 ILGITEAYKKDTHPNK 199
           I G+ E Y + THPN+
Sbjct: 342 IYGVLEEYTRTTHPNE 357


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 9/25 (36%), Positives = 15/25 (60%)
 Frame = -2

Query: 378 WLSSPKANLATASVYAASPLIGAYS 304
           W S+ +A L      AA+PL+ +Y+
Sbjct: 267 WFSNRRARLRKQITSAATPLVRSYA 291


>AY362544-1|AAQ63456.1|  268|Tribolium castaneum chitin synthase
           protein.
          Length = 268

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 484 LLGFRIVISDEL 449
           LLGFR +++DEL
Sbjct: 132 LLGFRYLVNDEL 143


>AY362543-1|AAQ63455.1|  677|Tribolium castaneum chitin synthase
           protein.
          Length = 677

 Score = 21.8 bits (44), Expect = 4.3
 Identities = 8/12 (66%), Positives = 11/12 (91%)
 Frame = -1

Query: 484 LLGFRIVISDEL 449
           LLGFR +++DEL
Sbjct: 446 LLGFRYLVNDEL 457



 Score = 21.4 bits (43), Expect = 5.7
 Identities = 7/25 (28%), Positives = 13/25 (52%)
 Frame = +2

Query: 53  VLKNNNIDYFVGCTALRASSTWWSN 127
           +++NN   Y +  + +  S  WW N
Sbjct: 3   LVENNPTLYLIPVSVILISVGWWEN 27


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 6/11 (54%), Positives = 9/11 (81%)
 Frame = +3

Query: 117 GGAMCLWAHQM 149
           GG +CLW+ Q+
Sbjct: 507 GGEVCLWSEQV 517


>AM712902-1|CAN84641.1|   95|Tribolium castaneum hypothetical
           protein protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 10/13 (76%), Positives = 10/13 (76%)
 Frame = -2

Query: 165 VIPRITSGGPIGT 127
           VI  ITSGGPI T
Sbjct: 45  VIGGITSGGPIPT 57


>DQ855501-1|ABH88188.1|  146|Tribolium castaneum chemosensory
           protein 15 protein.
          Length = 146

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +3

Query: 324 VKQHILMRSPNW 359
           V QH+++  PNW
Sbjct: 84  VFQHLMIHRPNW 95


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.0 bits (42), Expect = 7.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 235 FIISVCSNTKVDLVGMCVFLVS 170
           FI+SV   TK+D  G  + L S
Sbjct: 49  FIVSVYLTTKIDNDGESISLAS 70


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 360 PLVKTARSFKIRATVLCRLCPALAPCV*V*SSSLI 464
           P V    + KIR   L      + PCV + S +L+
Sbjct: 197 PYVDVTFTIKIRRRTLYYFFNLIVPCVLISSMALL 231


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 360 PLVKTARSFKIRATVLCRLCPALAPCV*V*SSSLI 464
           P V    + KIR   L      + PCV + S +L+
Sbjct: 197 PYVDVTFTIKIRRRTLYYFFNLIVPCVLISSMALL 231


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 360 PLVKTARSFKIRATVLCRLCPALAPCV*V*SSSLI 464
           P V    + KIR   L      + PCV + S +L+
Sbjct: 197 PYVDVTFTIKIRRRTLYYFFNLIVPCVLISSMALL 231


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 360 PLVKTARSFKIRATVLCRLCPALAPCV*V*SSSLI 464
           P V    + KIR   L      + PCV + S +L+
Sbjct: 197 PYVDVTFTIKIRRRTLYYFFNLIVPCVLISSMALL 231


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/35 (31%), Positives = 16/35 (45%)
 Frame = +3

Query: 360 PLVKTARSFKIRATVLCRLCPALAPCV*V*SSSLI 464
           P V    + KIR   L      + PCV + S +L+
Sbjct: 197 PYVDVTFTIKIRRRTLYYFFNLIVPCVLISSMALL 231


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 6/11 (54%), Positives = 7/11 (63%)
 Frame = +2

Query: 110  STWWSNVPMGP 142
            STWWS+    P
Sbjct: 1040 STWWSSTTTSP 1050


>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 11/32 (34%), Positives = 13/32 (40%)
 Frame = +2

Query: 230 DEGKPFVLPSVRKAEEILHKKGLNHEYAPISG 325
           D+GK F   S  K   I      NH+   I G
Sbjct: 253 DQGKKFAYNSTVKVAVIYGGTSTNHQRGRILG 284


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = +2

Query: 263 RKAEEILHKKGLNHEYAPISGE 328
           R+ E   + KGL+ E  P SGE
Sbjct: 408 RRDERERYFKGLDEEKLPESGE 429


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 148,930
Number of Sequences: 336
Number of extensions: 3534
Number of successful extensions: 22
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)