Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_D13
(577 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_57277| Best HMM Match : Phage_T7_Capsid (HMM E-Value=6.7) 102 2e-22
SB_8675| Best HMM Match : Aminotran_1_2 (HMM E-Value=0) 87 1e-17
SB_51759| Best HMM Match : No HMM Matches (HMM E-Value=.) 49 2e-06
SB_47095| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085) 29 2.7
SB_21904| Best HMM Match : Vinculin (HMM E-Value=0) 29 2.7
SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_21448| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_47585| Best HMM Match : Umbravirus_LDM (HMM E-Value=1.7) 28 6.3
SB_32989| Best HMM Match : Umbravirus_LDM (HMM E-Value=3.4) 28 6.3
SB_22460| Best HMM Match : CCT (HMM E-Value=4.4) 28 6.3
SB_20004| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029) 28 6.3
SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.3
>SB_57277| Best HMM Match : Phage_T7_Capsid (HMM E-Value=6.7)
Length = 130
Score = 102 bits (244), Expect = 2e-22
Identities = 45/67 (67%), Positives = 55/67 (82%)
Frame = +2
Query: 77 YFVGCTALRASSTWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLP 256
Y G A+R SS WWS+V GPPD ILG+TEA+K+DT+P K+NLGVGAYRDD GKP+VLP
Sbjct: 39 YAQGYAAVRLSS-WWSHVEAGPPDAILGVTEAFKRDTNPKKMNLGVGAYRDDTGKPYVLP 97
Query: 257 SVRKAEE 277
SV+KA +
Sbjct: 98 SVKKASD 104
>SB_8675| Best HMM Match : Aminotran_1_2 (HMM E-Value=0)
Length = 512
Score = 87.0 bits (206), Expect = 1e-17
Identities = 45/103 (43%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Frame = +2
Query: 221 YRDDEGKPFVLPSVRKAEEILHKK----GLNHEYAPISGEAAYTDAVAKLAFGEDSQVIQ 388
YRD++GKP+VLP V K E L + LNHEY I G ++DA KL G D I
Sbjct: 106 YRDNDGKPWVLPVVSKVETQLAQGIADGTLNHEYLGIDGLRQFSDAACKLLLGGDHPAIA 165
Query: 389 NKSNCTVQTLSGTGALRLGLEFITNHYAKAKEIWMPTPTWGNH 517
C +Q++SGTG++ LGL+F+ Y K ++ PTWGNH
Sbjct: 166 QNRVCGIQSISGTGSVFLGLKFLYQFY-NCKTAYISKPTWGNH 207
Score = 86.2 bits (204), Expect = 2e-17
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Frame = +2
Query: 104 ASSTWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAEEIL 283
AS+ + +VP+ P D + + Y KD P+K+NLGVGAYRD++GKP+VLP V K E L
Sbjct: 2 ASTNLFKDVPLVPTDHVFHVMACYNKDKDPSKINLGVGAYRDNDGKPWVLPVVSKVETQL 61
Query: 284 HK----KGLNHEYAPISGEAAYTDAVAKLAFGEDSQVI-QNK 394
+ LNHEY I G ++DA KL G D I QN+
Sbjct: 62 AQGIADGTLNHEYLGIDGLRQFSDAACKLLLGGDHPAIAQNR 103
>SB_51759| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 64
Score = 49.2 bits (112), Expect = 2e-06
Identities = 29/63 (46%), Positives = 36/63 (57%), Gaps = 5/63 (7%)
Frame = +2
Query: 221 YRDDEGKPFVLPSVRKAEEILHK----KGLNHEYAPISGEAAYTDAVAKLAFGEDSQVI- 385
YRD++GKP+VLP V K E L + LNHEY I G ++DA KL G D I
Sbjct: 2 YRDNDGKPWVLPVVSKVETQLAQGIADGTLNHEYLGIDGLRQFSDAACKLLLGGDHPAIA 61
Query: 386 QNK 394
QN+
Sbjct: 62 QNR 64
>SB_47095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 535
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +2
Query: 146 DVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAEEILHKKGLNH 304
DV YK+D + NLGV AYR P +LP + +EI++ KG+ +
Sbjct: 84 DVACDSYHKYKEDVQLLR-NLGVKAYRFSISWPRILP--KGTKEIINTKGIEY 133
>SB_43834| Best HMM Match : Pox_A32 (HMM E-Value=0.0085)
Length = 1227
Score = 29.1 bits (62), Expect = 2.7
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +2
Query: 455 ITNHYAKAKEIWMPTPTWGNHPQICN 532
+T+ AK +W+ P++GN PQ N
Sbjct: 92 VTHRSAKESRLWLSEPSYGNWPQQLN 117
>SB_21904| Best HMM Match : Vinculin (HMM E-Value=0)
Length = 999
Score = 29.1 bits (62), Expect = 2.7
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 461 NHYAKAKEIWMPTPTWGNHPQICNMLKVATQEVPLLRPQ 577
NH AK +E+ + N+P+ M+++A + + L PQ
Sbjct: 433 NHAAKLEEVATLACSMSNNPEKVKMVRIAARHIRALAPQ 471
>SB_30371| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 955
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +2
Query: 227 DDEGKPFVLPSVRKAEEILHKKGLNHEYAPISGEA 331
D + KP + + +E +H K + H+YA SGE+
Sbjct: 171 DIDQKPTANSKMDEKKEFIHAKYIKHQYAQKSGES 205
>SB_21448| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 543
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/60 (25%), Positives = 28/60 (46%)
Frame = -3
Query: 353 WRPHQYMLLHH*SEHIHDLNLFYEESLLPSSLMVRQMVSLHHLCMLQHQG*PCWDVCLSC 174
W + ++H S + +LFY + LL + +++ +M H+ L C C+SC
Sbjct: 461 WLLNSSYNIYHFSALLFTTDLFYVKFLLDAFILLWRMPKYRHVVKLVWTRCCCCQCCVSC 520
>SB_47585| Best HMM Match : Umbravirus_LDM (HMM E-Value=1.7)
Length = 421
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 275 LLPSSLMVRQMVSLHHLCMLQHQG 204
LLP V Q+V+LHH + HQG
Sbjct: 269 LLPRKHHVSQLVALHHHVKVHHQG 292
>SB_32989| Best HMM Match : Umbravirus_LDM (HMM E-Value=3.4)
Length = 279
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 275 LLPSSLMVRQMVSLHHLCMLQHQG 204
LLP V Q+V+LHH + HQG
Sbjct: 127 LLPRKHHVSQLVALHHHVKVHHQG 150
>SB_22460| Best HMM Match : CCT (HMM E-Value=4.4)
Length = 313
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 275 LLPSSLMVRQMVSLHHLCMLQHQG 204
LLP V Q+V+LHH + HQG
Sbjct: 161 LLPRKHHVSQLVALHHHVKVHHQG 184
>SB_20004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 275 LLPSSLMVRQMVSLHHLCMLQHQG 204
LLP V Q+V+LHH + HQG
Sbjct: 96 LLPRKHHVSQLVALHHHVKVHHQG 119
>SB_7499| Best HMM Match : zf-CCHC (HMM E-Value=0.00029)
Length = 846
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 275 LLPSSLMVRQMVSLHHLCMLQHQG 204
LLP V Q+V+LHH + HQG
Sbjct: 479 LLPRKHHVSQLVALHHHIKVHHQG 502
>SB_27922| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1704
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/62 (29%), Positives = 28/62 (45%), Gaps = 1/62 (1%)
Frame = +2
Query: 299 NHEYAPISGEAAY-TDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFITNHYAK 475
+H + S E Y TD E I+N S C + +G+G ++I +HYAK
Sbjct: 58 DHIFENYSFEHEYPTDLPITSYHHEIVNTIENNSACVIFGPTGSGKTTQVPQYILDHYAK 117
Query: 476 AK 481
+
Sbjct: 118 QR 119
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,713,186
Number of Sequences: 59808
Number of extensions: 441090
Number of successful extensions: 964
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 908
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 962
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1373676929
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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