Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D13
         (577 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    24   1.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    24   1.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   6.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.6  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   8.7  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 381 TWLSSPKANLATASVYAASPL 319
           TWLS   +N++ +SV   SPL
Sbjct: 28  TWLSLDNSNMSMSSVGPQSPL 48


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.8 bits (49), Expect = 1.2
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -2

Query: 381 TWLSSPKANLATASVYAASPL 319
           TWLS   +N++ +SV   SPL
Sbjct: 28  TWLSLDNSNMSMSSVGPQSPL 48


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = -1

Query: 121 PPCAASPQRCAADKIVDI 68
           PP ++ P     DKI DI
Sbjct: 347 PPSSSGPDSAKLDKIFDI 364


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -1

Query: 553  LCGNFEHVTDLRVVTPR 503
            LCGNF+H +    V P+
Sbjct: 1597 LCGNFDHDSTNDFVGPK 1613


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
            protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/29 (37%), Positives = 13/29 (44%)
 Frame = -2

Query: 321  LIGAYS*FKPFL*RISSAFLTDGKTNGFP 235
            ++  Y   KP    I  A   DGK  GFP
Sbjct: 948  IVSEYYQNKPISEVIGGAISLDGKPLGFP 976


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,740
Number of Sequences: 438
Number of extensions: 4279
Number of successful extensions: 12
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)