Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_D13
(577 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At2g30970.1 68415.m03777 aspartate aminotransferase, mitochondri... 142 1e-34
At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic... 140 8e-34
At4g31990.2 68417.m04554 aspartate aminotransferase, chloroplast... 139 1e-33
At4g31990.1 68417.m04553 aspartate aminotransferase, chloroplast... 139 1e-33
At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast... 135 2e-32
At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic... 118 3e-27
At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic... 116 1e-26
At3g54460.1 68416.m06025 SNF2 domain-containing protein / helica... 31 0.73
At4g20320.1 68417.m02967 CTP synthase, putative / UTP--ammonia l... 29 2.9
At4g18240.1 68417.m02709 starch synthase-related protein contain... 29 2.9
At5g51290.1 68418.m06358 ceramide kinase-related contains weak s... 28 3.9
At5g13230.1 68418.m01520 pentatricopeptide (PPR) repeat-containi... 28 5.1
At1g72110.1 68414.m08335 expressed protein 28 5.1
At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containi... 27 6.8
At1g75530.1 68414.m08778 forkhead-associated domain-containing p... 27 6.8
At1g53330.1 68414.m06045 pentatricopeptide (PPR) repeat-containi... 27 6.8
At5g45210.1 68418.m05549 disease resistance protein (TIR-NBS-LRR... 27 9.0
>At2g30970.1 68415.m03777 aspartate aminotransferase, mitochondrial
/ transaminase A (ASP1) identical to SP|P46643 Aspartate
aminotransferase, mitochondrial precursor (EC 2.6.1.1)
(Transaminase A) {Arabidopsis thaliana}
Length = 430
Score = 142 bits (345), Expect = 1e-34
Identities = 72/160 (45%), Positives = 96/160 (60%)
Frame = +2
Query: 98 LRASSTWWSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAEE 277
LR+ S+WW +V P D ILG+TEA+ D P KVN+GVGAYRDD GKP VL VR+AE+
Sbjct: 26 LRSMSSWWKSVEPAPKDPILGVTEAFLADPSPEKVNVGVGAYRDDNGKPVVLECVREAEK 85
Query: 278 ILHKKGLNHEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFI 457
L EY P+ G A D KLA+G++S+ I++K VQTLSGTGA RL +F
Sbjct: 86 RLAGSTF-MEYLPMGGSAKMVDLTLKLAYGDNSEFIKDKRIAAVQTLSGTGACRLFADF- 143
Query: 458 TNHYAKAKEIWMPTPTWGNHPQICNMLKVATQEVPLLRPQ 577
++ +I++P PTW NH I +V + P+
Sbjct: 144 QKRFSPGSQIYIPVPTWSNHHNIWKDAQVPQKTYHYYHPE 183
>At5g19550.1 68418.m02328 aspartate aminotransferase, cytoplasmic
isozyme 1 / transaminase A (ASP2) identical to SP|P46645
Aspartate aminotransferase, cytoplasmic isozyme 1 (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana}
Length = 405
Score = 140 bits (338), Expect = 8e-34
Identities = 70/146 (47%), Positives = 93/146 (63%), Gaps = 1/146 (0%)
Frame = +2
Query: 119 WSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAE-EILHKKG 295
+SNV P D ILG+T AY D P K+NLGVGAYR +EGKP VL VRKAE ++++
Sbjct: 5 FSNVARAPEDPILGVTVAYNNDPSPVKINLGVGAYRTEEGKPLVLDVVRKAEQQLVNDPS 64
Query: 296 LNHEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFITNHYAK 475
EY PI G + + AKL G DS I TVQ LSGTG+LR+G EF+ HY +
Sbjct: 65 RVKEYIPIVGISDFNKLSAKLILGADSPAITESRVTTVQCLSGTGSLRVGAEFLKTHYHQ 124
Query: 476 AKEIWMPTPTWGNHPQICNMLKVATQ 553
+ I++P PTWGNHP++ N+ ++ +
Sbjct: 125 S-VIYIPKPTWGNHPKVFNLAGLSVE 149
>At4g31990.2 68417.m04554 aspartate aminotransferase, chloroplast /
transaminase A (ASP5) (AAT1) nearly identical to
SP|P46248 Aspartate aminotransferase, chloroplast
precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis
thaliana}
Length = 453
Score = 139 bits (336), Expect = 1e-33
Identities = 70/153 (45%), Positives = 97/153 (63%)
Frame = +2
Query: 119 WSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAEEILHKKGL 298
+ + M PPD ILG++EA+K DT+ K+NLGVGAYR +E +P+VL V+KAE ++ ++G
Sbjct: 53 FEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGD 112
Query: 299 NHEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFITNHYAKA 478
N EY PI G AA+ A A+L FG VI+ + T+Q LSGTG+LRL I ++ A
Sbjct: 113 NKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGA 172
Query: 479 KEIWMPTPTWGNHPQICNMLKVATQEVPLLRPQ 577
K + + +PTWGNH I N KV E P+
Sbjct: 173 KVV-ISSPTWGNHKNIFNDAKVPWSEYRYYDPK 204
>At4g31990.1 68417.m04553 aspartate aminotransferase, chloroplast /
transaminase A (ASP5) (AAT1) nearly identical to
SP|P46248 Aspartate aminotransferase, chloroplast
precursor (EC 2.6.1.1) (Transaminase A) {Arabidopsis
thaliana}
Length = 453
Score = 139 bits (336), Expect = 1e-33
Identities = 70/153 (45%), Positives = 97/153 (63%)
Frame = +2
Query: 119 WSNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAEEILHKKGL 298
+ + M PPD ILG++EA+K DT+ K+NLGVGAYR +E +P+VL V+KAE ++ ++G
Sbjct: 53 FEGITMAPPDPILGVSEAFKADTNGMKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGD 112
Query: 299 NHEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFITNHYAKA 478
N EY PI G AA+ A A+L FG VI+ + T+Q LSGTG+LRL I ++ A
Sbjct: 113 NKEYLPIEGLAAFNKATAELLFGAGHPVIKEQRVATIQGLSGTGSLRLAAALIERYFPGA 172
Query: 479 KEIWMPTPTWGNHPQICNMLKVATQEVPLLRPQ 577
K + + +PTWGNH I N KV E P+
Sbjct: 173 KVV-ISSPTWGNHKNIFNDAKVPWSEYRYYDPK 204
>At5g11520.1 68418.m01344 aspartate aminotransferase, chloroplast /
transaminase A (ASP3) (YLS4) identical to SP|P46644
Aspartate aminotransferase, chloroplast precursor (EC
2.6.1.1) (Transaminase A) {Arabidopsis thaliana};
identical to cDNA YLS4 mRNA for aspartate
aminotransferase (ASP3), partial cds GI:13122285
Length = 449
Score = 135 bits (327), Expect = 2e-32
Identities = 73/171 (42%), Positives = 101/171 (59%), Gaps = 1/171 (0%)
Frame = +2
Query: 17 RMAQALKKLTTQVLKNNNIDYFVGCTALRASSTWWSNVPMGPPDVILGITEAYKKDTHPN 196
R+ L+ L + +N + T+ + +S++ P D ILG+T AY KD P
Sbjct: 15 RIGALLRHLNSGSDSDNLSSLYASPTSGGTGGSVFSHLVQAPEDPILGVTVAYNKDPSPV 74
Query: 197 KVNLGVGAYRDDEGKPFVLPSVRKAE-EILHKKGLNHEYAPISGEAAYTDAVAKLAFGED 373
K+NLGVGAYR +EGKP VL VRKAE ++++ + EY PI G + AKL G D
Sbjct: 75 KLNLGVGAYRTEEGKPLVLNVVRKAEQQLINDRTRIKEYLPIVGLVEFNKLSAKLILGAD 134
Query: 374 SQVIQNKSNCTVQTLSGTGALRLGLEFITNHYAKAKEIWMPTPTWGNHPQI 526
S I+ TV+ LSGTG+LR+G EF+ HY + K I++ PTWGNHP+I
Sbjct: 135 SPAIRENRITTVECLSGTGSLRVGGEFLAKHYHQ-KTIYITQPTWGNHPKI 184
>At1g62800.1 68414.m07089 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 403
Score = 118 bits (284), Expect = 3e-27
Identities = 60/144 (41%), Positives = 84/144 (58%)
Frame = +2
Query: 122 SNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAEEILHKKGLN 301
S+V P D +L + A + D P K+NL G YR +EGKP VL VR+AE+ L L+
Sbjct: 6 SSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQL-ANDLD 64
Query: 302 HEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFITNHYAKAK 481
EY P++G + KL G+DS ++ T Q LSGTG+LR+G EF+ H K
Sbjct: 65 KEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATH-NKES 123
Query: 482 EIWMPTPTWGNHPQICNMLKVATQ 553
I++P PTWGNHP+I + ++ Q
Sbjct: 124 VIFVPNPTWGNHPRIFTLAGLSVQ 147
>At1g62800.2 68414.m07090 aspartate aminotransferase, cytoplasmic
isozyme 2 / transaminase A (ASP4) identical to aspartate
aminotransferase, cytoplasmic isozyme 2 SP:P46646
[Arabidopsis thaliana]
Length = 405
Score = 116 bits (278), Expect = 1e-26
Identities = 59/145 (40%), Positives = 84/145 (57%), Gaps = 1/145 (0%)
Frame = +2
Query: 122 SNVPMGPPDVILGITEAYKKDTHPNKVNLGVGAYRDDEGKPFVLPSVRKAEEIL-HKKGL 298
S+V P D +L + A + D P K+NL G YR +EGKP VL VR+AE+ L +
Sbjct: 6 SSVLPAPEDPVLSVIFACRDDPSPVKLNLSAGTYRTEEGKPLVLDVVRRAEQQLANDLSR 65
Query: 299 NHEYAPISGEAAYTDAVAKLAFGEDSQVIQNKSNCTVQTLSGTGALRLGLEFITNHYAKA 478
+ EY P++G + KL G+DS ++ T Q LSGTG+LR+G EF+ H K
Sbjct: 66 DKEYLPLNGLPEFNKLSTKLILGDDSPALKENRVVTTQCLSGTGSLRVGAEFLATH-NKE 124
Query: 479 KEIWMPTPTWGNHPQICNMLKVATQ 553
I++P PTWGNHP+I + ++ Q
Sbjct: 125 SVIFVPNPTWGNHPRIFTLAGLSVQ 149
>At3g54460.1 68416.m06025 SNF2 domain-containing protein / helicase
domain-containing protein / F-box family protein similar
to SP|P36607 DNA repair protein rad8 {Schizosaccharomyces
pombe}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00176: SNF2 family
N-terminal domain, PF00646: F-box domain
Length = 1378
Score = 30.7 bits (66), Expect = 0.73
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 380 VIQNKSNCTVQTLSGTGALRLGLEFITNHYAKAKEIW 490
+ QN ++C + G+GAL L L F+T H + IW
Sbjct: 1238 MFQNDADCMALLMDGSGALGLDLSFVT-HVFLMEPIW 1273
>At4g20320.1 68417.m02967 CTP synthase, putative / UTP--ammonia
ligase, putative similar to SP|P17812 CTP synthase (EC
6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains
Pfam profile PF00117: glutamine amidotransferase class-I
Length = 563
Score = 28.7 bits (61), Expect = 2.9
Identities = 20/76 (26%), Positives = 39/76 (51%), Gaps = 6/76 (7%)
Frame = +3
Query: 168 KLTRKTHIPTRSTLVLEHTEMMKGNHLSYHQ------*GRQKRFFIKKV*IMNMLRSVVK 329
K+T K H+P R +V ++TE++ ++LS H+ R+K+ I + ++ + K
Sbjct: 289 KMTDKLHVPVRIAVVGKYTELL-DSYLSIHKALLHASVARRKKLIIDWISASDLEQGAKK 347
Query: 330 QHILMRSPNWPLVKTA 377
++ W L+K A
Sbjct: 348 ENPDAYKAAWKLLKGA 363
>At4g18240.1 68417.m02709 starch synthase-related protein contains
similarity to starch synthase GI:4582783 from [Vigna
unguiculata]
Length = 1040
Score = 28.7 bits (61), Expect = 2.9
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Frame = +2
Query: 245 FVLPSVRKAEEILHKKGLNHEYAPISGEAA-YTDAVAKLAFGEDSQVIQNKSNCTVQTLS 421
F++PS+ + + + + PI+ + D+V + +D+ Q ++ T QT
Sbjct: 922 FIIPSIFEPCGLTQMIAMRYGSIPIARKTGGLNDSVFDI--DDDTIPTQFQNGFTFQTAD 979
Query: 422 GTGALRLGLEFITNHYAKAKEIWM 493
G LE NHY K +E WM
Sbjct: 980 EQG-FNYALERAFNHYKKDEEKWM 1002
>At5g51290.1 68418.m06358 ceramide kinase-related contains weak
similarity to ceramide kinases (GI:21624342) [Mus
musculus]
Length = 608
Score = 28.3 bits (60), Expect = 3.9
Identities = 12/31 (38%), Positives = 15/31 (48%)
Frame = +3
Query: 327 KQHILMRSPNWPLVKTARSFKIRATVLCRLC 419
K + RS WP T RS KI C++C
Sbjct: 437 KASLHTRSKTWPFRNTTRSEKILCRANCKIC 467
>At5g13230.1 68418.m01520 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 822
Score = 27.9 bits (59), Expect = 5.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +3
Query: 147 M*SWVSLKLTRKTHIPTRSTLVLEHTEMMKGNHLSYH 257
M W+++K TR ++P R+ ++L+ + K L H
Sbjct: 717 MLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVH 753
>At1g72110.1 68414.m08335 expressed protein
Length = 479
Score = 27.9 bits (59), Expect = 5.1
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = -1
Query: 244 WFPFIISVCSNTKVDLVGMCVFLVSFSDTQDHI 146
W FI+ + +T V+++ VF+ SDT HI
Sbjct: 190 WLWFIVRLMFHTCVEVIKSIVFICRASDTSAHI 222
>At3g49730.1 68416.m05437 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 1184
Score = 27.5 bits (58), Expect = 6.8
Identities = 13/27 (48%), Positives = 16/27 (59%)
Frame = -1
Query: 541 FEHVTDLRVVTPRRGRHPDLLGFRIVI 461
FE +L RRG HPDLL + +VI
Sbjct: 393 FEECLELIEKMKRRGCHPDLLIYNVVI 419
>At1g75530.1 68414.m08778 forkhead-associated domain-containing
protein / FHA domain-containing protein
Length = 555
Score = 27.5 bits (58), Expect = 6.8
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +2
Query: 482 EIWMPTPTWGNHPQICN 532
EIW+P P + HP+I N
Sbjct: 231 EIWIPPPPYDPHPEIVN 247
>At1g53330.1 68414.m06045 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 471
Score = 27.5 bits (58), Expect = 6.8
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -1
Query: 559 YFLCGNFEHVTDLRVVTPRRGRHPDLLGFRIV 464
+F +E T L PRRG PD L +RIV
Sbjct: 338 FFRIKKWEEATYLFEDMPRRGCSPDTLSYRIV 369
>At5g45210.1 68418.m05549 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 697
Score = 27.1 bits (57), Expect = 9.0
Identities = 9/23 (39%), Positives = 15/23 (65%)
Frame = -2
Query: 564 SGTSCVATLSMLQICGWLPHVGV 496
+G C + +L+ CG+ PHVG+
Sbjct: 422 NGEPCDDVMRILEGCGFFPHVGI 444
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,604,310
Number of Sequences: 28952
Number of extensions: 300307
Number of successful extensions: 750
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 736
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1121903184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -