Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_D11
(549 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical ... 221 3e-58
AF038615-5|AAB94142.1| 934|Caenorhabditis elegans Hypothetical ... 29 1.7
Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical p... 29 2.2
Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical p... 29 2.2
Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical pr... 29 2.9
U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeas... 27 6.7
AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical ... 27 8.9
AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein. 27 8.9
>AC024777-5|AAF60564.1| 506|Caenorhabditis elegans Hypothetical
protein Y42H9AR.1 protein.
Length = 506
Score = 221 bits (540), Expect = 3e-58
Identities = 93/149 (62%), Positives = 127/149 (85%)
Frame = +3
Query: 102 MGSSQSTEIPGGGCEGYHVLRVQDGSPGQKANLEPFFDFIVAIENTRLDQDNDTLKELLK 281
MGSS+S IPGGG EGYHVLRVQ+ SPG A LEPFFDFIV+I N RLD+DNDT+KE+LK
Sbjct: 1 MGSSESVPIPGGGTEGYHVLRVQENSPGAVAGLEPFFDFIVSIGNIRLDKDNDTMKEVLK 60
Query: 282 ANVDKPIKMLIYSSKTQSVREVMITPSANWGGQGLLGVSIKFCSFEGANENVWHVLEVHP 461
+++KP+++ +Y+SK+Q+VR+ I PS NWGGQGLLGVSI+FCSF+GA+++VWH++ V P
Sbjct: 61 QHIEKPLEITVYNSKSQAVRQTSIVPSQNWGGQGLLGVSIRFCSFDGASQHVWHIISVQP 120
Query: 462 SSPAEIAGLRPFSDYXIGADSIMHESEDL 548
+SPA +AGL +DY +GA+S++H+++DL
Sbjct: 121 NSPASLAGLIADTDYILGAESVLHQADDL 149
Score = 68.1 bits (159), Expect = 4e-12
Identities = 34/86 (39%), Positives = 53/86 (61%)
Frame = +3
Query: 150 YHVLRVQDGSPGQKANLEPFFDFIVAIENTRLDQDNDTLKELLKANVDKPIKMLIYSSKT 329
+H++ VQ SP A L D+I+ E+ L Q +D + L++AN KP+K+ +Y+ T
Sbjct: 113 WHIISVQPNSPASLAGLIADTDYILGAESV-LHQADDLIA-LVQANEGKPLKLYVYNVDT 170
Query: 330 QSVREVMITPSANWGGQGLLGVSIKF 407
VREV +TP++ WGG+G LG I +
Sbjct: 171 DVVREVSLTPNSAWGGEGCLGCDIGY 196
>AF038615-5|AAB94142.1| 934|Caenorhabditis elegans Hypothetical
protein R02D3.1 protein.
Length = 934
Score = 29.5 bits (63), Expect = 1.7
Identities = 18/80 (22%), Positives = 38/80 (47%)
Frame = +3
Query: 123 EIPGGGCEGYHVLRVQDGSPGQKANLEPFFDFIVAIENTRLDQDNDTLKELLKANVDKPI 302
++PGG E + + VQ G+P + + + AI + + + E+ +A + +PI
Sbjct: 854 QLPGGNSERHRISLVQYGNPNGFSAMARTVGYTTAIVSHMVLNN-----EIQRAGIQRPI 908
Query: 303 KMLIYSSKTQSVREVMITPS 362
+Y + +R+ I P+
Sbjct: 909 LKEVYRPALKRLRDFGIVPT 928
>Z70753-12|CAA94761.2| 585|Caenorhabditis elegans Hypothetical
protein F40F9.5 protein.
Length = 585
Score = 29.1 bits (62), Expect = 2.2
Identities = 15/30 (50%), Positives = 20/30 (66%), Gaps = 4/30 (13%)
Frame = -3
Query: 325 LLLYISIFIG----LSTLAFNNSFNVSLSW 248
LL +SI I LS+L FNN FN++L+W
Sbjct: 477 LLTVVSIIISFSPILSSLIFNNIFNMTLTW 506
>Z70307-11|CAA94337.1| 488|Caenorhabditis elegans Hypothetical
protein C39E9.10 protein.
Length = 488
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/40 (35%), Positives = 24/40 (60%)
Frame = -3
Query: 373 PQLALGVIITSLTDCVLLLYISIFIGLSTLAFNNSFNVSL 254
P L +G+I + ++LLYI IF G++ + FN N+ +
Sbjct: 330 PFLLIGMIFGDKS--LVLLYIMIFFGITFMCFNWGLNIDM 367
>Z79598-1|CAB01867.3| 586|Caenorhabditis elegans Hypothetical
protein C44H4.1 protein.
Length = 586
Score = 28.7 bits (61), Expect = 2.9
Identities = 23/77 (29%), Positives = 34/77 (44%)
Frame = -3
Query: 367 LALGVIITSLTDCVLLLYISIFIGLSTLAFNNSFNVSLSWSSLVFSIATIKSKNGSRFAF 188
L LG+++ C++L Y+ FI LS A NV S S I + +G+ +
Sbjct: 506 LILGIVLVVFVSCIILGYLMRFIFLSYEA-KTKPNVFGSTISSSGCIRNMYGGDGTLVSE 564
Query: 187 *PGEPS*TRNT*YPSHP 137
G PS N Y + P
Sbjct: 565 DHGHPSSANNNVYLNRP 581
>U13876-14|AAA21168.1| 2500|Caenorhabditis elegans Not-like (yeast
ccr4/not complexcomponent) protein 1 protein.
Length = 2500
Score = 27.5 bits (58), Expect = 6.7
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +3
Query: 195 NLEPFFD-FIVAIENTRLDQDNDTLKEL 275
N +P ++ F+ AIEN LD D LK L
Sbjct: 1213 NFQPLYNQFVNAIENPYLDHDRQLLKNL 1240
>AL021180-1|CAA15980.1| 383|Caenorhabditis elegans Hypothetical
protein Y44F5A.1 protein.
Length = 383
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 156 VLRVQDGSPGQKANLEPFFDFIVAIENTRLDQDNDTLKELLKAN 287
+LR QD + E FFD +V +N D+D K + N
Sbjct: 315 ILRAQDAKSKKMRKTEGFFDGLVGPKNDSDSDDDDEPKSKKRRN 358
>AF303252-1|AAG50210.1| 383|Caenorhabditis elegans 3E324 protein.
Length = 383
Score = 27.1 bits (57), Expect = 8.9
Identities = 14/44 (31%), Positives = 20/44 (45%)
Frame = +3
Query: 156 VLRVQDGSPGQKANLEPFFDFIVAIENTRLDQDNDTLKELLKAN 287
+LR QD + E FFD +V +N D+D K + N
Sbjct: 315 ILRAQDAKSKKMRKTEGFFDGLVGPKNDSDSDDDDEPKSKKRRN 358
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,615,741
Number of Sequences: 27780
Number of extensions: 270372
Number of successful extensions: 721
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 699
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 719
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1113119490
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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