Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D10
         (593 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006C1382 Cluster: PREDICTED: hypothetical protein;...    35   1.7  
UniRef50_A5NW51 Cluster: Transcriptional regulator, TetR family;...    35   1.7  
UniRef50_Q5P6N5 Cluster: Putative uncharacterized protein; n=1; ...    33   5.0  
UniRef50_Q6UDI9 Cluster: DNA polymerase processivity factor; n=1...    33   6.7  
UniRef50_A3ER29 Cluster: NAD-dependent aldehyde dehydrogenase; n...    33   6.7  
UniRef50_Q5Z444 Cluster: Putative uncharacterized protein OSJNBa...    33   6.7  
UniRef50_Q3UPT7 Cluster: 0 day neonate eyeball cDNA, RIKEN full-...    32   8.8  
UniRef50_Q6H5A0 Cluster: Putative uncharacterized protein P0027G...    32   8.8  

>UniRef50_UPI00006C1382 Cluster: PREDICTED: hypothetical protein;
           n=2; Homo sapiens|Rep: PREDICTED: hypothetical protein -
           Homo sapiens
          Length = 213

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
 Frame = -2

Query: 163 PLQLHRKKAWGRSVQRRAAESAAATHP--LRRGPSGLTRRAAGKPAPSPCFFALG 5
           P QL    A      RRAA   + + P  L+RGP+G  +  AG P+P  C  ALG
Sbjct: 58  PAQLAAAAAAAGRGSRRAARPGSPSPPPRLQRGPTGARQPPAGSPSPGRC-LALG 111


>UniRef50_A5NW51 Cluster: Transcriptional regulator, TetR family;
           n=1; Methylobacterium sp. 4-46|Rep: Transcriptional
           regulator, TetR family - Methylobacterium sp. 4-46
          Length = 978

 Score = 34.7 bits (76), Expect = 1.7
 Identities = 18/48 (37%), Positives = 23/48 (47%)
 Frame = -2

Query: 166 GPLQLHRKKAWGRSVQRRAAESAAATHPLRRGPSGLTRRAAGKPAPSP 23
           GP++    +  GR   R    + A  HP RRG SGL  R AG+    P
Sbjct: 84  GPVRPRVAQPAGRPALRAGLRALARPHPARRGGSGLRVRGAGRSPRGP 131


>UniRef50_Q5P6N5 Cluster: Putative uncharacterized protein; n=1;
           Azoarcus sp. EbN1|Rep: Putative uncharacterized protein
           - Azoarcus sp. (strain EbN1) (Aromatoleum aromaticum
           (strain EbN1))
          Length = 374

 Score = 33.1 bits (72), Expect = 5.0
 Identities = 17/50 (34%), Positives = 24/50 (48%)
 Frame = -2

Query: 172 PEGPLQLHRKKAWGRSVQRRAAESAAATHPLRRGPSGLTRRAAGKPAPSP 23
           P G L+  R++   R   RR ++  A     RR P+G T   +G PA  P
Sbjct: 9   PRGRLRPLREQQRRRGAARRLSDCGAKNRAWRRAPAGRTSAQSGAPADRP 58


>UniRef50_Q6UDI9 Cluster: DNA polymerase processivity factor; n=1;
           Psittacid herpesvirus 1|Rep: DNA polymerase processivity
           factor - Psittacid herpesvirus 1
          Length = 500

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 15/36 (41%), Positives = 23/36 (63%)
 Frame = -2

Query: 148 RKKAWGRSVQRRAAESAAATHPLRRGPSGLTRRAAG 41
           RK+A G ++Q+ A  S+ ATH  ++ P+G  R  AG
Sbjct: 431 RKRAPGATLQQSAQPSSPATHRKQKRPAGAARTGAG 466


>UniRef50_A3ER29 Cluster: NAD-dependent aldehyde dehydrogenase; n=1;
           Leptospirillum sp. Group II UBA|Rep: NAD-dependent
           aldehyde dehydrogenase - Leptospirillum sp. Group II UBA
          Length = 502

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
 Frame = -2

Query: 166 GPL--QLHRKKAWGRSVQRRAAESAAATHPLRR 74
           GPL  + H +K WGR VQR   E A A  PLRR
Sbjct: 343 GPLIQESHAEKVWGR-VQRAVQEGATALTPLRR 374


>UniRef50_Q5Z444 Cluster: Putative uncharacterized protein
           OSJNBa0061G23.31; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           OSJNBa0061G23.31 - Oryza sativa subsp. japonica (Rice)
          Length = 404

 Score = 32.7 bits (71), Expect = 6.7
 Identities = 17/30 (56%), Positives = 18/30 (60%)
 Frame = -2

Query: 103 SAAATHPLRRGPSGLTRRAAGKPAPSPCFF 14
           SAAA+   RR PSGL     GKPAPS   F
Sbjct: 321 SAAASRHRRRWPSGLVPPTPGKPAPSVADF 350


>UniRef50_Q3UPT7 Cluster: 0 day neonate eyeball cDNA, RIKEN
           full-length enriched library, clone:E130309D14
           product:hypothetical protein, full insert sequence; n=2;
           Mus musculus|Rep: 0 day neonate eyeball cDNA, RIKEN
           full-length enriched library, clone:E130309D14
           product:hypothetical protein, full insert sequence - Mus
           musculus (Mouse)
          Length = 391

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 13/41 (31%), Positives = 24/41 (58%)
 Frame = -2

Query: 160 LQLHRKKAWGRSVQRRAAESAAATHPLRRGPSGLTRRAAGK 38
           +Q H+++   R ++R +  +A  +HP R GP+G   RA  +
Sbjct: 90  VQSHQQEEASRELERNSGRAAYKSHPGRHGPAGPHERACAR 130


>UniRef50_Q6H5A0 Cluster: Putative uncharacterized protein
           P0027G10.60; n=1; Oryza sativa (japonica
           cultivar-group)|Rep: Putative uncharacterized protein
           P0027G10.60 - Oryza sativa subsp. japonica (Rice)
          Length = 112

 Score = 32.3 bits (70), Expect = 8.8
 Identities = 18/37 (48%), Positives = 21/37 (56%)
 Frame = -2

Query: 133 GRSVQRRAAESAAATHPLRRGPSGLTRRAAGKPAPSP 23
           GR  + R A +AAATH  RRGP     R  G+P P P
Sbjct: 14  GRGGEGRGA-AAAATHRRRRGPQEGKGRRPGEPLPLP 49


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 457,878,871
Number of Sequences: 1657284
Number of extensions: 7319074
Number of successful extensions: 21442
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 20618
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21427
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 41488046300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)