Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_D09
(221 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436 43 3e-05
02_02_0095 + 6716327-6716335,6717302-6717451,6717523-6717583,671... 37 0.003
02_04_0267 - 21430370-21430474,21430559-21430618,21430937-214310... 35 0.008
01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443 32 0.054
01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110 32 0.072
06_03_0529 - 21788132-21788395,21788414-21788511,21789458-217899... 31 0.095
01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932 31 0.095
03_01_0249 - 1935355-1935827,1936129-1936330 31 0.17
01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931 31 0.17
01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911 30 0.22
01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205 30 0.29
12_01_0674 + 5755523-5755613,5756325-5756366,5756830-5756915,575... 29 0.51
01_04_0021 - 15151645-15151809,15152184-15152343,15152548-151530... 29 0.51
11_02_0046 + 7711536-7711568,7711685-7711850,7712251-7712339,771... 29 0.67
05_01_0350 + 2736096-2736242,2736460-2736508,2736704-2737046,274... 27 1.5
01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319 27 1.5
12_01_0675 + 5759641-5759722,5760247-5760291,5760690-5760775,576... 27 2.7
06_01_1051 - 8305531-8306151 27 2.7
01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188 27 2.7
10_06_0162 - 11348250-11349531,11349571-11349671 26 3.6
08_02_1570 + 27931057-27931367,27931486-27931550,27931763-279318... 26 3.6
05_06_0033 + 25074301-25074393,25074680-25075203,25076367-250764... 26 4.7
02_01_0137 + 988442-988641,989088-989281,989369-989488,989594-98... 26 4.7
11_06_0471 + 23982629-23982875,23982965-23983123,23983199-239833... 25 6.2
03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049 25 6.2
07_03_0576 + 19638725-19638779,19638988-19639144,19639871-196401... 25 8.3
04_04_1189 + 31586991-31587291,31587358-31587397,31587449-315875... 25 8.3
>11_06_0225 + 21451966-21452036,21452127-21452200,21452342-21452436
Length = 79
Score = 43.2 bits (97), Expect = 3e-05
Identities = 18/60 (30%), Positives = 30/60 (50%)
Frame = +2
Query: 38 LDIHVTEASPPCSTVLLTAAILDLKINKIVVDFANGVHLSPEYLKLNPQHTVPILVDNDF 217
L ++ S P +++ + + ++ VD HLSPE+ K+NP VP +VD F
Sbjct: 5 LKVYADRRSQPSRAIIIFCRVNRIDFEEVTVDLFKREHLSPEFKKINPMGQVPAIVDGRF 64
>02_02_0095 +
6716327-6716335,6717302-6717451,6717523-6717583,
6717646-6717725,6717802-6717903,6717982-6718471,
6718796-6719171,6720320-6720379,6720887-6721056,
6721287-6721340,6721384-6721523,6722362-6722511,
6722582-6722642,6722705-6722784,6722933-6723034,
6723111-6723612,6724401-6724776,6725419-6725493,
6726058-6726198,6726264-6726282
Length = 1065
Score = 36.7 bits (81), Expect = 0.003
Identities = 21/70 (30%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Frame = +2
Query: 8 LLHFARLKMTLDIHVTEASPPCSTVLLTAAILDLKINKIVVDFANGV-HLSPEYLKLNPQ 184
++ F +++ L +H + + L+ A +K+ ++ +F GV + +PEYLK+NP
Sbjct: 554 IVFFCTIRVDLVLHTFDGNKNAFKALIAAEYSGVKV-ELAKNFQMGVSNKTPEYLKMNPI 612
Query: 185 HTVPILVDND 214
VPIL D
Sbjct: 613 GKVPILETPD 622
Score = 32.7 bits (71), Expect = 0.041
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 32 MTLDIHVTEASPPCSTVLLTAAILDLKINKIVVDFANGV-HLSPEYLKLNPQHTVPILVD 208
M L +H + L+ A +K+ ++V +F GV + +PE+LK+NP +P+L
Sbjct: 1 MALVLHAGSGNKNAFKALIAAEYSGVKV-ELVKNFQMGVSNKTPEFLKMNPIGKIPVLET 59
Query: 209 ND 214
D
Sbjct: 60 PD 61
>02_04_0267 -
21430370-21430474,21430559-21430618,21430937-21431046,
21431220-21431295,21431541-21431594,21431935-21432006,
21432088-21432173,21432694-21432750,21432886-21432991
Length = 241
Score = 35.1 bits (77), Expect = 0.008
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +2
Query: 128 VDFANGVHLSPEYLKLNPQHTVPILVDND 214
V+ G H PE++K+NP VP LVD D
Sbjct: 44 VNLLKGEHSDPEFMKVNPMKFVPALVDGD 72
>01_07_0080 - 40955222-40955676,40956123-40956171,40956282-40956443
Length = 221
Score = 32.3 bits (70), Expect = 0.054
Identities = 16/50 (32%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +2
Query: 74 STVLLTAAILD---LKINKIVVDFANGVHLSPEYLKLNPQHTVPILVDND 214
+ V+ A +L+ L + + VD H P +L LNP +P+L D D
Sbjct: 17 ANVVRVATVLNEKGLDFDLVPVDLRTAAHKQPHFLALNPFGQIPVLQDGD 66
>01_06_0810 - 32141657-32142105,32142986-32143034,32144961-32145110
Length = 215
Score = 31.9 bits (69), Expect = 0.072
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 122 IVVDFANGVHLSPEYLKLNPQHTVPILVDND 214
+ +DF+ G H +P++L NP VP L D D
Sbjct: 32 VPLDFSKGEHKAPDHLARNPFGQVPALQDGD 62
>06_03_0529 -
21788132-21788395,21788414-21788511,21789458-21789953,
21790033-21790134,21790218-21790270,21790354-21790414,
21790491-21790640,21791298-21791350,21794125-21794152
Length = 434
Score = 31.5 bits (68), Expect = 0.095
Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Frame = +2
Query: 20 ARLKMTLDIHVTEASPPCSTVLLTAAILDLKINKIVVDFANGV-HLSPEYLKLNPQHTVP 196
A + M L +H + L+ A +K+ ++ +F GV + +PE+LK+NP +P
Sbjct: 21 APVGMALVLHCGSGNKNAFKALIAAEYTGVKV-ELTKNFEMGVSNKTPEFLKMNPLGKIP 79
Query: 197 IL 202
+L
Sbjct: 80 VL 81
>01_04_0030 - 15263341-15263801,15264631-15264679,15264783-15264932
Length = 219
Score = 31.5 bits (68), Expect = 0.095
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +2
Query: 80 VLLTAAILDLKINKIVVDFANGVHLSPEYLKLNPQHTVPILVDND 214
VLL + + + VDF H SPE+LK NP +P D D
Sbjct: 18 VLLCLEEVGAEYEVVNVDFTVMEHKSPEHLKRNPFGQIPAFQDGD 62
>03_01_0249 - 1935355-1935827,1936129-1936330
Length = 224
Score = 30.7 bits (66), Expect = 0.17
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = +2
Query: 62 SPPCSTVLLTAAILDLKINKIVVDFANGVHLSPEYLKLNPQHTVPILVDN 211
SP + V D+ VD + G H SP +LKL P VP D+
Sbjct: 13 SPAVARVAACLLEKDVPFQVEPVDMSKGEHKSPSFLKLQPFGQVPAFKDS 62
>01_04_0025 - 15199036-15199493,15199633-15199681,15199782-15199931
Length = 218
Score = 30.7 bits (66), Expect = 0.17
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = +2
Query: 74 STVLLTAAILDLKINKIVVDFANGVHLSPEYLKLNPQHTVPILVDND 214
S VL+ + + VDF G SPE+++ NP +P L D D
Sbjct: 16 SRVLVCLEEVGADYELVTVDFLAGEQNSPEHVERNPFGKIPALQDGD 62
>01_04_0045 + 15392817-15392963,15393108-15393156,15393463-15393911
Length = 214
Score = 30.3 bits (65), Expect = 0.22
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +2
Query: 32 MTLDIHVTEASPPCSTVLLTAAILDLKINKIVVDFANGVHLSPEYLKLNPQHTVPILVDN 211
M + ++ S + VL+ + + +DF+ H SPE+ NP VP L D
Sbjct: 1 MAMKVYGLPMSTNVARVLVCLEEAGEQYEVVPIDFSIAEHKSPEHTSRNPFGQVPALQDG 60
Query: 212 D 214
D
Sbjct: 61 D 61
>01_04_0029 - 15240827-15241290,15241925-15241973,15242056-15242205
Length = 220
Score = 29.9 bits (64), Expect = 0.29
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 80 VLLTAAILDLKINKIVVDFANGVHLSPEYLKLNPQHTVPILVDND 214
VL+ + ++ + +DF H SPE+LK NP +P D D
Sbjct: 18 VLVCLEEVGVEYELVNIDFKAMEHKSPEHLKRNPFGQMPAFQDGD 62
>12_01_0674 +
5755523-5755613,5756325-5756366,5756830-5756915,
5757008-5757079,5757450-5757525,5757765-5757826,
5758119-5758178,5758293-5758394
Length = 196
Score = 29.1 bits (62), Expect = 0.51
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +2
Query: 158 PEYLKLNPQHTVPILVDNDF 217
P+Y K+NP VP LVD DF
Sbjct: 44 PDYGKINPIKYVPALVDGDF 63
>01_04_0021 -
15151645-15151809,15152184-15152343,15152548-15153025,
15153243-15153291,15153585-15153734
Length = 333
Score = 29.1 bits (62), Expect = 0.51
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +2
Query: 62 SPPCSTVLLTAAILDLKINKIVVDFANGVHLSPEYLKLNPQHTVPILVDND 214
SP + VL+ + + + + G H PE+L NP +P+L D D
Sbjct: 12 SPWMARVLVALEEAGAEYEVVPMSRSGGDHRRPEHLARNPFGEIPVLEDGD 62
>11_02_0046 +
7711536-7711568,7711685-7711850,7712251-7712339,
7712443-7712514,7712807-7712860,7713000-7713075,
7713238-7713299,7713445-7713504,7713663-7713773
Length = 240
Score = 28.7 bits (61), Expect = 0.67
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 158 PEYLKLNPQHTVPILVDND 214
PE+ KLNP VP LVD D
Sbjct: 66 PEFEKLNPMKYVPALVDGD 84
>05_01_0350 +
2736096-2736242,2736460-2736508,2736704-2737046,
2743911-2744499
Length = 375
Score = 27.5 bits (58), Expect = 1.5
Identities = 16/61 (26%), Positives = 26/61 (42%)
Frame = +2
Query: 32 MTLDIHVTEASPPCSTVLLTAAILDLKINKIVVDFANGVHLSPEYLKLNPQHTVPILVDN 211
M ++ ASP +TVL+ + VD A G + S +L +P +P D
Sbjct: 1 MVAKVYGVAASPYVATVLVCLEEAGASYELVAVDMAAGENRSRHHLARSPFGKIPAFEDG 60
Query: 212 D 214
+
Sbjct: 61 E 61
>01_04_0035 + 15326445-15326594,15326707-15326755,15326853-15327319
Length = 221
Score = 27.5 bits (58), Expect = 1.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 128 VDFANGVHLSPEYLKLNPQHTVPILVDND 214
VDF + H P++L NP VP D D
Sbjct: 34 VDFGDREHKGPDHLARNPFGQVPAFQDGD 62
>12_01_0675 +
5759641-5759722,5760247-5760291,5760690-5760775,
5760888-5760959,5761210-5761263,5761385-5761460,
5761778-5761839,5762174-5762233,5762331-5762432
Length = 212
Score = 26.6 bits (56), Expect = 2.7
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = +2
Query: 158 PEYLKLNPQHTVPILVDND 214
P+Y K+NP +P LVD D
Sbjct: 42 PDYEKINPIKYIPALVDGD 60
>06_01_1051 - 8305531-8306151
Length = 206
Score = 26.6 bits (56), Expect = 2.7
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -3
Query: 159 GERCTPLAKSTTILFILRSNIAAVNSTVLQGGEASVTWIS 40
G CT K+TT+LF+ R + + + + SV W S
Sbjct: 41 GSNCTDAEKATTVLFLRRHLGETLKNEFMFEMDPSVLWQS 80
>01_04_0032 + 15273716-15273865,15274658-15274706,15275737-15276188
Length = 216
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/31 (35%), Positives = 15/31 (48%)
Frame = +2
Query: 122 IVVDFANGVHLSPEYLKLNPQHTVPILVDND 214
+ VD + G H P ++ NP VP D D
Sbjct: 32 VPVDMSTGEHKRPPHISRNPFGQVPAFEDGD 62
>10_06_0162 - 11348250-11349531,11349571-11349671
Length = 460
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/24 (54%), Positives = 16/24 (66%)
Frame = +2
Query: 53 TEASPPCSTVLLTAAILDLKINKI 124
T S +T LLTAAI DL+IN +
Sbjct: 228 TRPSKARATQLLTAAIFDLQINHV 251
>08_02_1570 +
27931057-27931367,27931486-27931550,27931763-27931841,
27931992-27932010,27932091-27932210,27932557-27932626,
27932709-27932752,27932918-27932959,27933033-27933092,
27933413-27933470,27934718-27935376
Length = 508
Score = 26.2 bits (55), Expect = 3.6
Identities = 17/62 (27%), Positives = 28/62 (45%)
Frame = +2
Query: 23 RLKMTLDIHVTEASPPCSTVLLTAAILDLKINKIVVDFANGVHLSPEYLKLNPQHTVPIL 202
R + ++I+ E P C V A+LDL + NG P+ L++ + P +
Sbjct: 140 RPEKPIEIYEFEGCPFCRKVREMVAVLDLDVLFYPCP-KNGPTFRPKVLEMGGKQQFPYM 198
Query: 203 VD 208
VD
Sbjct: 199 VD 200
>05_06_0033 +
25074301-25074393,25074680-25075203,25076367-25076442,
25076549-25076641,25077167-25077253,25077338-25078095,
25078447-25078575,25079145-25079265
Length = 626
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 174 SFKYSGERCTPLAKSTTILFILRS 103
S KYS ERC L + LF+LR+
Sbjct: 199 SNKYSCERCKKLTSARKQLFVLRA 222
>02_01_0137 +
988442-988641,989088-989281,989369-989488,989594-989673,
990244-990510,990840-992458,992571-993327,993560-995506
Length = 1727
Score = 25.8 bits (54), Expect = 4.7
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 7/38 (18%)
Frame = -2
Query: 181 WIKLQIFWRKVH-------AVSEIDYDFIYFEVQYCSS 89
W K+Q WR + A+ ++ Y+F+ +QYC S
Sbjct: 636 WRKIQYKWRSILEQDDDILAILKLSYEFLPVHLQYCFS 673
>11_06_0471 +
23982629-23982875,23982965-23983123,23983199-23983357,
23983433-23983496,23983813-23983900,23985497-23985517,
23985950-23986020,23986299-23986502,23986680-23986686
Length = 339
Score = 25.4 bits (53), Expect = 6.2
Identities = 15/47 (31%), Positives = 25/47 (53%)
Frame = -3
Query: 162 SGERCTPLAKSTTILFILRSNIAAVNSTVLQGGEASVTWISKVIFKR 22
S E +P + + SN++ +ST++ G A+VT +S V KR
Sbjct: 52 SDENMSPTIATFEVRNETPSNVSIPSSTIVTGTLANVTNLSAVELKR 98
>03_01_0246 - 1918935-1919689,1919771-1919819,1919894-1920049
Length = 319
Score = 25.4 bits (53), Expect = 6.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = +2
Query: 62 SPPCSTVLLTAAILDLKINKIVVDFANGVHLSPEYLKLNP 181
S + VL+ D++ + VD G P+YLKL P
Sbjct: 14 SAEVARVLMCLFEKDVEFQLVRVDAYRGTQRMPQYLKLQP 53
>07_03_0576 +
19638725-19638779,19638988-19639144,19639871-19640113,
19640267-19640801,19640897-19641054,19641194-19641626
Length = 526
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = -3
Query: 114 ILRSNIAAVNSTVLQGGEASVTWISKVIFKRAKC 13
IL +IA + +L G + V W+ +++ AKC
Sbjct: 424 ILTLDIAPHETYILYGNDLVVHWVLRLVDALAKC 457
>04_04_1189 +
31586991-31587291,31587358-31587397,31587449-31587534,
31587535-31588097,31588250-31589913,31589956-31590066,
31590152-31591181,31591234-31591406,31591535-31591814,
31592275-31592331
Length = 1434
Score = 25.0 bits (52), Expect = 8.3
Identities = 12/43 (27%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = -2
Query: 211 VIHQNWDGVL--WIKLQIFWRKVHAVSEIDYDFIYFEVQYCSS 89
V +++W V W LQ+ + + ++ YD++ F +Q C S
Sbjct: 430 VSYEHWRTVQDKWKSLQVKDDDIIPILKLSYDYLPFHLQCCFS 472
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,285,535
Number of Sequences: 37544
Number of extensions: 96841
Number of successful extensions: 253
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 253
length of database: 14,793,348
effective HSP length: 53
effective length of database: 12,803,516
effective search space used: 256070320
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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