Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D09
         (221 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_48592| Best HMM Match : Galactosyl_T (HMM E-Value=1.5e-26)          27   2.4  
SB_57162| Best HMM Match : DUF1086 (HMM E-Value=3.4)                   25   7.4  
SB_34962| Best HMM Match : No HMM Matches (HMM E-Value=.)              25   7.4  
SB_22733| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.8)             25   7.4  
SB_57197| Best HMM Match : Transposase_21 (HMM E-Value=0.27)           25   7.4  
SB_12399| Best HMM Match : DUF885 (HMM E-Value=2.3e-08)                25   7.4  
SB_10082| Best HMM Match : Toxin_7 (HMM E-Value=2.1)                   25   7.4  

>SB_48592| Best HMM Match : Galactosyl_T (HMM E-Value=1.5e-26)
          Length = 492

 Score = 27.1 bits (57), Expect = 2.4
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 140 NGVHLSPEYLKLNPQHTVPILVDN 211
           N  + +PE+L +NP   VP++V N
Sbjct: 293 NPYNKTPEWLAINPNGLVPVIVHN 316


>SB_57162| Best HMM Match : DUF1086 (HMM E-Value=3.4)
          Length = 512

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 196 WDGVLWIKLQIFW 158
           WDG  W+++Q FW
Sbjct: 283 WDGERWLEVQWFW 295


>SB_34962| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 203

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 196 WDGVLWIKLQIFW 158
           WDG  W+++Q FW
Sbjct: 180 WDGERWLEVQWFW 192


>SB_22733| Best HMM Match : Ribosomal_S27 (HMM E-Value=9.8)
          Length = 203

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 196 WDGVLWIKLQIFW 158
           WDG  W+++Q FW
Sbjct: 180 WDGERWLEVQWFW 192


>SB_57197| Best HMM Match : Transposase_21 (HMM E-Value=0.27)
          Length = 314

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 196 WDGVLWIKLQIFW 158
           WDG  W+++Q FW
Sbjct: 65  WDGERWLEVQWFW 77


>SB_12399| Best HMM Match : DUF885 (HMM E-Value=2.3e-08)
          Length = 718

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -2

Query: 196 WDGVLWIKLQIFW 158
           WDG  W+++Q FW
Sbjct: 208 WDGERWLEVQWFW 220


>SB_10082| Best HMM Match : Toxin_7 (HMM E-Value=2.1)
          Length = 192

 Score = 25.4 bits (53), Expect = 7.4
 Identities = 10/28 (35%), Positives = 17/28 (60%)
 Frame = -3

Query: 105 SNIAAVNSTVLQGGEASVTWISKVIFKR 22
           ++I  ++ +  +G E  VTW  K IFK+
Sbjct: 60  NSIFGISRSTTKGLEIQVTWDGKAIFKK 87


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,230,182
Number of Sequences: 59808
Number of extensions: 106064
Number of successful extensions: 261
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 252
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 261
length of database: 16,821,457
effective HSP length: 51
effective length of database: 13,771,249
effective search space used: 302967478
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)