Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D07
         (247 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           22   1.1  
DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.    21   2.6  
EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    20   3.4  
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    19   7.9  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    19   7.9  

>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 1.1
 Identities = 6/12 (50%), Positives = 10/12 (83%)
 Frame = +3

Query: 201 WGLPEEEEYFYK 236
           W LP++E+ FY+
Sbjct: 217 WALPKQEDCFYQ 228


>DQ211693-1|ABB16909.1|  314|Tribolium castaneum dorsocross protein.
          Length = 314

 Score = 20.6 bits (41), Expect = 2.6
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = +3

Query: 201 WGLPEEEEYFYKNTK 245
           +GLPE E  FY+  K
Sbjct: 282 FGLPEYEYSFYQEVK 296


>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 20.2 bits (40), Expect = 3.4
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +3

Query: 189 HSEKWGLPEEEE 224
           H EK+G+P  EE
Sbjct: 200 HDEKYGVPTLEE 211


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 19.0 bits (37), Expect = 7.9
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 239 IFIKVFFFLWQPPFL 195
           I + VFF  W P ++
Sbjct: 279 IIVLVFFVCWTPYYV 293


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 19.0 bits (37), Expect = 7.9
 Identities = 6/15 (40%), Positives = 9/15 (60%)
 Frame = -3

Query: 239 IFIKVFFFLWQPPFL 195
           I + VFF  W P ++
Sbjct: 279 IIVLVFFVCWTPYYV 293


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,298
Number of Sequences: 336
Number of extensions: 375
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 46
effective length of database: 107,129
effective search space used:  3749515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 36 (19.4 bits)