Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_D07
(247 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex det... 23 0.74
AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex det... 23 0.74
AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic ac... 22 1.3
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.2
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.2
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.2
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.2
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.2
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 21 2.2
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 21 2.2
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 21 2.2
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 20 3.9
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 19 9.1
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 19 9.1
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 19 9.1
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 19 9.1
AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8 ... 19 9.1
>AY569717-1|AAS86670.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 22.6 bits (46), Expect = 0.74
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 55 ENEFSKTKSIFCTSNY*YKN 114
E E SK I ++NY YKN
Sbjct: 294 ERERSKETKIISSNNYNYKN 313
>AY569712-1|AAS86665.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 22.6 bits (46), Expect = 0.74
Identities = 10/20 (50%), Positives = 12/20 (60%)
Frame = +1
Query: 55 ENEFSKTKSIFCTSNY*YKN 114
E E SK I ++NY YKN
Sbjct: 305 ERERSKETKIISSNNYNYKN 324
>AY500239-1|AAR92109.1| 555|Apis mellifera neuronal nicotinic
acetylcholine receptoralpha7-1 protein.
Length = 555
Score = 21.8 bits (44), Expect = 1.3
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 236 FIKVFFFLWQPPFLRM 189
++KV F W P LRM
Sbjct: 331 WVKVVFLYWLPCILRM 346
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 236 FIKVFFFLWQPPFLRM 189
+IK+ F W P LRM
Sbjct: 294 WIKMLFLQWLPCLLRM 309
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 236 FIKVFFFLWQPPFLRM 189
+IK+ F W P LRM
Sbjct: 294 WIKMLFLQWLPCLLRM 309
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 236 FIKVFFFLWQPPFLRM 189
+IK+ F W P LRM
Sbjct: 294 WIKMLFLQWLPCLLRM 309
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 236 FIKVFFFLWQPPFLRM 189
+IK+ F W P LRM
Sbjct: 294 WIKMLFLQWLPCLLRM 309
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 236 FIKVFFFLWQPPFLRM 189
+IK+ F W P LRM
Sbjct: 294 WIKMLFLQWLPCLLRM 309
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.0 bits (42), Expect = 2.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 236 FIKVFFFLWQPPFLRM 189
+IK+ F W P LRM
Sbjct: 294 WIKMLFLQWLPCLLRM 309
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 2.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 236 FIKVFFFLWQPPFLRM 189
+IK+ F W P LRM
Sbjct: 362 WIKMLFLQWLPCLLRM 377
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.0 bits (42), Expect = 2.2
Identities = 8/16 (50%), Positives = 10/16 (62%)
Frame = -3
Query: 236 FIKVFFFLWQPPFLRM 189
+IK+ F W P LRM
Sbjct: 362 WIKMLFLQWLPCLLRM 377
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 20.2 bits (40), Expect = 3.9
Identities = 7/15 (46%), Positives = 9/15 (60%)
Frame = -3
Query: 239 IFIKVFFFLWQPPFL 195
I I VFF W P ++
Sbjct: 264 IIIAVFFICWTPYYV 278
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 19.0 bits (37), Expect = 9.1
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = +1
Query: 40 IDPEIENEFSKTK 78
IDP +E+EF K
Sbjct: 105 IDPSLEDEFMGPK 117
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.0 bits (37), Expect = 9.1
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 169 YKRGWRCIRRNGG 207
Y+ RC+ NGG
Sbjct: 237 YEGALRCLAHNGG 249
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.0 bits (37), Expect = 9.1
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 169 YKRGWRCIRRNGG 207
Y+ RC+ NGG
Sbjct: 237 YEGALRCLAHNGG 249
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 19.0 bits (37), Expect = 9.1
Identities = 6/13 (46%), Positives = 8/13 (61%)
Frame = +1
Query: 169 YKRGWRCIRRNGG 207
Y+ RC+ NGG
Sbjct: 237 YEGALRCLAHNGG 249
>AF080430-1|AAC28863.2| 208|Apis mellifera ribosomal protein S8
protein.
Length = 208
Score = 19.0 bits (37), Expect = 9.1
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +1
Query: 40 IDPEIENEFSKTKSIFCTSN 99
++P +E +F+ + + C S+
Sbjct: 158 VEPALEEQFATGRVLACISS 177
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,976
Number of Sequences: 438
Number of extensions: 749
Number of successful extensions: 17
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 47
effective length of database: 125,757
effective search space used: 4275738
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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