Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_D06
         (502 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X57398-1|CAA40655.1| 1190|Homo sapiens pm5 protein protein.            30   3.9  
U91318-4|AAC15783.1| 1148|Homo sapiens pM5 (3' partial) protein.       30   3.9  
BC065535-1|AAH65535.1| 1222|Homo sapiens NODAL modulator 1 protein.    30   3.9  
BC041131-1|AAH41131.1| 1222|Homo sapiens NODAL modulator 2 protein.    30   3.9  
BC028389-1|AAH28389.1| 1100|Homo sapiens NOMO2 protein protein.        30   3.9  
BC006531-1|AAH06531.2|  807|Homo sapiens NOMO3 protein protein.        30   3.9  
X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein.       29   9.1  

>X57398-1|CAA40655.1| 1190|Homo sapiens pm5 protein protein.
          Length = 1190

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 170 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 84
           L G+  PE  G+E V++E  AS P++ VF
Sbjct: 771 LEGQIHPELEGVEIVISEKGASSPLITVF 799


>U91318-4|AAC15783.1| 1148|Homo sapiens pM5 (3' partial) protein.
          Length = 1148

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 170 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 84
           L G+  PE  G+E V++E  AS P++ VF
Sbjct: 803 LEGQIHPELEGVEIVISEKGASSPLITVF 831


>BC065535-1|AAH65535.1| 1222|Homo sapiens NODAL modulator 1 protein.
          Length = 1222

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 170 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 84
           L G+  PE  G+E V++E  AS P++ VF
Sbjct: 803 LEGQIHPELEGVEIVISEKGASSPLITVF 831


>BC041131-1|AAH41131.1| 1222|Homo sapiens NODAL modulator 2 protein.
          Length = 1222

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 170 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 84
           L G+  PE  G+E V++E  AS P++ VF
Sbjct: 803 LEGQIHPELEGVEIVISEKGASSPLITVF 831


>BC028389-1|AAH28389.1| 1100|Homo sapiens NOMO2 protein protein.
          Length = 1100

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 170 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 84
           L G+  PE  G+E V++E  AS P++ VF
Sbjct: 636 LEGQIHPELEGVEIVISEKGASSPLITVF 664


>BC006531-1|AAH06531.2|  807|Homo sapiens NOMO3 protein protein.
          Length = 807

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -3

Query: 170 LAGEFGPEPTGIEDVLAEVWASQPIVMVF 84
           L G+  PE  G+E V++E  AS P++ VF
Sbjct: 388 LEGQIHPELEGVEIVISEKGASSPLITVF 416


>X79198-1|CAA55790.1| 1938|Homo sapiens host cell factor protein.
          Length = 1938

 Score = 29.1 bits (62), Expect = 9.1
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = +1

Query: 25   RPCRRHRTTVWGTTKCLSIRNTITIG*EAHTSARTSSIPVGSGPN 159
            RPC  H+TT  GTT  +S+   +     +H +   S + V + P+
Sbjct: 1258 RPCETHQTTSTGTTMSVSVGALLPDATSSHRTVE-SGLEVAAAPS 1301


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 75,219,509
Number of Sequences: 237096
Number of extensions: 1518060
Number of successful extensions: 3658
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3531
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3658
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4593178062
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)