Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_D05
(566 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242; Eukary... 273 2e-72
UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA - ... 251 1e-65
UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23; Fungi... 219 4e-56
UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11; Ascom... 214 1e-54
UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1; Echinoco... 209 3e-53
UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19; Magno... 209 3e-53
UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6; Eukaryo... 200 2e-50
UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lambl... 184 1e-45
UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=1... 178 6e-44
UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa pro... 175 8e-43
UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40 ribo... 173 2e-42
UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7; Trich... 168 7e-41
UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin re... 159 3e-38
UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, who... 159 3e-38
UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillar... 138 6e-32
UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n... 136 4e-31
UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1; E... 129 5e-29
UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13; Archae... 120 2e-26
UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole geno... 117 2e-25
UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2; Thermop... 116 4e-25
UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1; ... 116 5e-25
UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:... 115 7e-25
UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 115 9e-25
UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10; Euryar... 113 3e-24
UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1; ... 100 3e-20
UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga m... 99 4e-20
UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12; Euryar... 100 5e-20
UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa... 96 6e-19
UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n... 87 3e-16
UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:... 86 5e-16
UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella nat... 86 6e-16
UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1; ... 80 4e-14
UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2; Thermoprotei... 73 4e-12
UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S riboso... 63 4e-09
UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal ... 61 2e-08
UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD l... 60 3e-08
UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4; Mycoplas... 53 4e-06
UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila melanogaster|... 52 7e-06
UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplas... 52 9e-06
UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep... 51 2e-05
UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;... 50 3e-05
UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3; Firmicut... 49 7e-05
UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4; Mollicut... 48 2e-04
UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma p... 47 3e-04
UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis... 46 5e-04
UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10; Rickett... 46 6e-04
UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32; Chlamyd... 45 0.001
UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7; Bacteria... 45 0.001
UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n... 45 0.001
UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellul... 44 0.002
UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of s... 44 0.003
UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3; Deltapro... 43 0.006
UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2; Mycoplas... 42 0.008
UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5; Bacteria... 42 0.008
UniRef50_A6EB55 Cluster: 30S ribosomal subunit protein S2; n=3; ... 42 0.010
UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep: L... 42 0.010
UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondri... 42 0.013
UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3; Planctom... 42 0.013
UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus ... 41 0.018
UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2; Deltaproteob... 41 0.023
UniRef50_A3HWY0 Cluster: 30S ribosomal protein S2; n=1; Algoriph... 41 0.023
UniRef50_Q7MX41 Cluster: 30S ribosomal protein S2; n=23; Bactero... 41 0.023
UniRef50_Q3B5U0 Cluster: Ribosomal protein S2; n=1; Pelodictyon ... 40 0.031
UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirell... 40 0.041
UniRef50_Q8KBK6 Cluster: 30S ribosomal protein S2; n=3; Bacteria... 40 0.041
UniRef50_Q1AW68 Cluster: Ribosomal protein S2; n=3; Bacteria|Rep... 40 0.054
UniRef50_A1B8E9 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep... 39 0.071
UniRef50_Q5KI10 Cluster: Ribosomal protein, putative; n=1; Filob... 39 0.071
UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1; ... 39 0.094
UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsi... 38 0.12
UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1; ... 38 0.12
UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60; Bacteri... 38 0.12
UniRef50_O78482 Cluster: Chloroplast 30S ribosomal protein S2; n... 38 0.12
UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S riboso... 38 0.16
UniRef50_O13970 Cluster: Mitochondrial ribosomal protein subunit... 38 0.16
UniRef50_Q83SL4 Cluster: 30S ribosomal protein S2; n=330; Bacter... 38 0.16
UniRef50_A7H716 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep... 38 0.22
UniRef50_Q8M1D9 Cluster: Ribosomal protein S2; n=1; Chaetosphaer... 38 0.22
UniRef50_Q39F43 Cluster: Ribosomal protein S2; n=11; Proteobacte... 37 0.29
UniRef50_A1ZN20 Cluster: Ribosomal protein S2; n=6; Bacteroidete... 37 0.29
UniRef50_Q1MRE3 Cluster: Ribosomal protein S2; n=4; Bacteria|Rep... 37 0.38
UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, wh... 36 0.50
UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1; ... 36 0.50
UniRef50_Q6Q8T9 Cluster: Predicted 30S ribosomal protein S2; n=1... 36 0.66
UniRef50_A5IY48 Cluster: 30S ribosomal protein S2; n=8; Mycoplas... 36 0.66
UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Re... 36 0.66
UniRef50_Q0P3M3 Cluster: Rps2 protein; n=1; Ostreococcus tauri|R... 36 0.66
UniRef50_P06354 Cluster: Chloroplast 30S ribosomal protein S2; n... 36 0.66
UniRef50_P56797 Cluster: Chloroplast 30S ribosomal protein S2; n... 36 0.66
UniRef50_Q6C1V9 Cluster: Yarrowia lipolytica chromosome F of str... 35 1.2
UniRef50_Q1K325 Cluster: Ribosomal protein S2; n=6; Bacteria|Rep... 35 1.5
UniRef50_A1AXW9 Cluster: Ribosomal protein S2; n=1; Candidatus R... 35 1.5
UniRef50_Q2UN92 Cluster: Mitochondrial/chloroplast ribosomal pro... 35 1.5
UniRef50_P46741 Cluster: Mitochondrial ribosomal protein S2; n=1... 35 1.5
UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1; ... 34 2.7
UniRef50_Q67Q95 Cluster: Putative uncharacterized protein; n=1; ... 33 3.5
UniRef50_Q1V2V1 Cluster: Probable 30S ribosomal protein S2; n=2;... 33 3.5
UniRef50_Q9W2T1 Cluster: CG9817-PA; n=1; Drosophila melanogaster... 33 3.5
UniRef50_Q0U871 Cluster: Putative uncharacterized protein; n=2; ... 33 4.7
UniRef50_A4R5S3 Cluster: Putative uncharacterized protein; n=1; ... 33 4.7
UniRef50_P66546 Cluster: 30S ribosomal protein S2; n=32; cellula... 33 4.7
UniRef50_Q3ZIZ5 Cluster: Chloroplast 30S ribosomal protein S2; n... 33 6.2
UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6 prot... 32 8.1
UniRef50_UPI00004488FF Cluster: UPI00004488FF related cluster; n... 32 8.1
UniRef50_Q02AL1 Cluster: Ribosomal protein S2; n=1; Solibacter u... 32 8.1
UniRef50_A7PZX1 Cluster: Chromosome chr15 scaffold_40, whole gen... 32 8.1
UniRef50_A6R797 Cluster: Putative uncharacterized protein; n=1; ... 32 8.1
UniRef50_Q9GCB9 Cluster: Mitochondrial ribosomal protein S2; n=3... 32 8.1
UniRef50_Q6N5Q2 Cluster: 30S ribosomal protein S2; n=95; Bacteri... 32 8.1
UniRef50_Q6YR51 Cluster: 30S ribosomal protein S2; n=2; Candidat... 32 8.1
>UniRef50_P08865 Cluster: 40S ribosomal protein SA; n=242;
Eukaryota|Rep: 40S ribosomal protein SA - Homo sapiens
(Human)
Length = 295
Score = 273 bits (669), Expect = 2e-72
Identities = 126/175 (72%), Positives = 142/175 (81%)
Frame = +2
Query: 41 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 220
MSG LD+L + EEDV K LAA THLG N++FQME Y+YKR+ DG ++INL+RTWEK
Sbjct: 1 MSGALDVLQMKEEDVLKFLAAGTHLGGTNLDFQMEQYIYKRKSDGIYIINLKRTWEKLLL 60
Query: 221 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 400
E+PADV VISSR GQRAVLKFAA TGATPIAGRFTPG FTNQIQAAFREPR
Sbjct: 61 AARAIVAIENPADVSVISSRNTGQRAVLKFAAATGATPIAGRFTPGTFTNQIQAAFREPR 120
Query: 401 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
LL+V DP DHQP+TEASYVN+P IALCNTDSPLR+VDIAIPCN K +HS+GLMW
Sbjct: 121 LLVVTDPRADHQPLTEASYVNLPTIALCNTDSPLRYVDIAIPCNNKGAHSVGLMW 175
>UniRef50_Q4KTE2 Cluster: SA; n=2; Fungi/Metazoa group|Rep: SA -
Suberites domuncula (Sponge)
Length = 325
Score = 251 bits (614), Expect = 1e-65
Identities = 113/175 (64%), Positives = 139/175 (79%)
Frame = +2
Query: 41 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 220
MSGGL++L++ E+DVTK+LAA THLG NV+ QM YV+K +GDG +IN+R+TWEK
Sbjct: 1 MSGGLEVLSMKEDDVTKLLAAGTHLGDSNVDIQMAQYVFKTKGDGVPIINVRKTWEKLLL 60
Query: 221 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 400
E+PADV V++++ FGQRA+LKFA +TGA PIAGRFTPG FTNQIQ AFREPR
Sbjct: 61 AARVIAAIENPADVCVLANKPFGQRAILKFAHYTGAFPIAGRFTPGTFTNQIQKAFREPR 120
Query: 401 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
LLIV D DHQPITEA+YVNIPVIA CNT+SPLR++D+AIPCN +S+GLMW
Sbjct: 121 LLIVSDARSDHQPITEAAYVNIPVIAFCNTNSPLRYIDVAIPCNNMGKNSLGLMW 175
>UniRef50_P32905 Cluster: 40S ribosomal protein S0-A; n=23;
Fungi/Metazoa group|Rep: 40S ribosomal protein S0-A -
Saccharomyces cerevisiae (Baker's yeast)
Length = 252
Score = 219 bits (535), Expect = 4e-56
Identities = 104/166 (62%), Positives = 118/166 (71%)
Frame = +2
Query: 68 LSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXE 247
L+ ED +LAA THLGA NV E YV+ R DG HVIN+ +TWEK
Sbjct: 9 LTPEDAQLLLAANTHLGARNVQVHQEPYVFNARPDGVHVINVGKTWEKLVLAARIIAAIP 68
Query: 248 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 427
+P DV ISSR FGQRAVLKFAAHTGATPIAGRFTPG+FTN I +F+EPRL+IV DP
Sbjct: 69 NPEDVVAISSRTFGQRAVLKFAAHTGATPIAGRFTPGSFTNYITRSFKEPRLVIVTDPRS 128
Query: 428 DHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
D Q I EASYVNIPVIAL + DSP FVD+AIPCN + HSIGL+W
Sbjct: 129 DAQAIKEASYVNIPVIALTDLDSPSEFVDVAIPCNNRGKHSIGLIW 174
>UniRef50_Q9Y7L8 Cluster: 40S ribosomal protein S0-A; n=11;
Ascomycota|Rep: 40S ribosomal protein S0-A -
Schizosaccharomyces pombe (Fission yeast)
Length = 292
Score = 214 bits (522), Expect = 1e-54
Identities = 99/173 (57%), Positives = 126/173 (72%)
Frame = +2
Query: 47 GGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXX 226
G ++L ++ED+ ++LAA H+G++N+ +M+ YV+KRR DG H++NL +TWEK
Sbjct: 5 GRPNILNATDEDIKQLLAANCHIGSKNLEVRMDNYVWKRRSDGVHILNLGKTWEKLVLAA 64
Query: 227 XXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLL 406
E+PADV V+S+R +G RAVLKFAAHTGAT IAGRFTPG FTN I +REPRL+
Sbjct: 65 RVIATIENPADVCVVSTRTYGHRAVLKFAAHTGATAIAGRFTPGNFTNYITRTYREPRLI 124
Query: 407 IVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
+V DP D Q I EAS+VNIPVIALC+TDS L VDIAIP N K SIGL+W
Sbjct: 125 VVTDPRADAQAIKEASFVNIPVIALCDTDSILNHVDIAIPTNNKGRKSIGLIW 177
>UniRef50_P46770 Cluster: 40S ribosomal protein SA; n=1;
Echinococcus granulosus|Rep: 40S ribosomal protein SA -
Echinococcus granulosus
Length = 268
Score = 209 bits (511), Expect = 3e-53
Identities = 97/174 (55%), Positives = 119/174 (68%)
Frame = +2
Query: 41 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 220
MSGG++ L L E+D+ M+AA HLG+ N N+QM+ YVY R +G H+I+L +TWEK
Sbjct: 1 MSGGIEALELKEDDIRLMVAAKVHLGSTNANYQMQQYVYDRNDEGNHIIHLNKTWEKLLL 60
Query: 221 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 400
E+PADV +I + QR LKF +TG T + GRFTPGAFTNQIQ+ F+EPR
Sbjct: 61 AARAICAIENPADVVIIGGQPTWQRGALKFGHYTGTTSVPGRFTPGAFTNQIQSGFKEPR 120
Query: 401 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
LLIV DP DHQP+ E S VNIPVI CNTDSPL+ VDI IPCN +SI LM
Sbjct: 121 LLIVCDPKGDHQPVREGSAVNIPVIGFCNTDSPLQCVDIGIPCN-NDKYSIALM 173
>UniRef50_Q08682 Cluster: 40S ribosomal protein Sa-1; n=19;
Magnoliophyta|Rep: 40S ribosomal protein Sa-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 298
Score = 209 bits (511), Expect = 3e-53
Identities = 98/169 (57%), Positives = 117/169 (69%), Gaps = 1/169 (0%)
Frame = +2
Query: 62 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 241
L+ E DV M AA HLG +N N+QME YV+KRR DG ++ NL +TWEK
Sbjct: 12 LSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIVA 71
Query: 242 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 421
E+P D+ V S+R +GQRAVLKFA +TGA IAGR TPG FTNQ+Q +F EPRLLI+ DP
Sbjct: 72 IENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPGTFTNQMQTSFSEPRLLILTDP 131
Query: 422 AQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIG-LMW 565
DHQPI E + NIP+IA C+TDSP+RFVDI IP N K HSIG L W
Sbjct: 132 RTDHQPIKEGALGNIPIIAFCDTDSPMRFVDIGIPANNKGKHSIGCLFW 180
>UniRef50_Q01CH5 Cluster: B1056G08.113 gene product; n=6;
Eukaryota|Rep: B1056G08.113 gene product - Ostreococcus
tauri
Length = 313
Score = 200 bits (488), Expect = 2e-50
Identities = 92/168 (54%), Positives = 118/168 (70%)
Frame = +2
Query: 62 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 241
++ E D+ MLAA HLG +NV+FQME YV+KRR DG H+INL +TW+K
Sbjct: 31 MSQKEADIAMMLAAGCHLGTKNVDFQMERYVWKRRADGIHIINLGKTWDKLMLAARVIVA 90
Query: 242 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 421
E+P DV ++R +GQRAVLKFA +TGA +AGR TPG +TNQ A F EPR+L+V DP
Sbjct: 91 VENPQDVIAQAARPYGQRAVLKFAQYTGAKALAGRHTPGTYTNQKDAVFAEPRVLVVTDP 150
Query: 422 AQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
D QPI+E ++VNIP IA C+TDSPL+ VDIAIP N K+ SIG ++
Sbjct: 151 RTDAQPISETAFVNIPTIAFCDTDSPLKNVDIAIPANNKAKQSIGCLY 198
>UniRef50_Q7QWF5 Cluster: GLP_336_16528_17265; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_336_16528_17265 - Giardia lamblia
ATCC 50803
Length = 245
Score = 184 bits (448), Expect = 1e-45
Identities = 84/166 (50%), Positives = 114/166 (68%)
Frame = +2
Query: 68 LSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXE 247
L E DV KML ATTHLG N++ +M+ Y++ R+ DGT V NL++ W K +
Sbjct: 15 LKEADVKKMLVATTHLGVRNIDRRMQFYIFDRQKDGTFVFNLQKVWAKIVFAARILVTID 74
Query: 248 DPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQ 427
DPA++ V+++R QRA+LKF +T AT GRF PG FTN++ + EPRLL+V DP
Sbjct: 75 DPAEIAVVANRPDAQRAILKFCKYTHATAFPGRFIPGNFTNRMNPNYCEPRLLLVNDPVV 134
Query: 428 DHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
D Q I EASYVNIP I+LCN+D+ L+F+D+AIPCN K+ SIGL++
Sbjct: 135 DRQAILEASYVNIPTISLCNSDANLKFIDVAIPCNNKTPMSIGLIY 180
>UniRef50_Q4N1J1 Cluster: 40S ribosomal protein SA, putative; n=11;
Apicomplexa|Rep: 40S ribosomal protein SA, putative -
Theileria parva
Length = 274
Score = 178 bits (434), Expect = 6e-44
Identities = 85/175 (48%), Positives = 110/175 (62%)
Frame = +2
Query: 41 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXX 220
M+ L E+ + ML A H+G +NV +M YVY R +G H+INL T EK
Sbjct: 1 MAAPTSKLTPDEDSIRMMLTAKVHIGTKNVENKMRKYVYSRTQEGVHLINLAHTLEKLKV 60
Query: 221 XXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPR 400
+P +V V+S+R +G RAVLKF+ + G+ PIAGR+ PG TNQI F EPR
Sbjct: 61 AARAIVTVSNPEEVVVVSARPYGSRAVLKFSHYVGSHPIAGRWIPGTLTNQITQKFIEPR 120
Query: 401 LLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
LL+ DP D Q + E+SYV++PVIALC+TDSPL +VDIAIPCN K SI LM+
Sbjct: 121 LLVATDPRTDAQSLRESSYVSLPVIALCDTDSPLNYVDIAIPCNNKGKESIALMY 175
>UniRef50_UPI0000E20E16 Cluster: PREDICTED: similar to 33 kDa
protein; n=4; Eutheria|Rep: PREDICTED: similar to 33 kDa
protein - Pan troglodytes
Length = 355
Score = 175 bits (425), Expect = 8e-43
Identities = 82/107 (76%), Positives = 91/107 (85%)
Frame = +2
Query: 245 EDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 424
E+ ADV VISSR GQRAVLKFAA TGATPIAG FTPG FT+QIQAAFREPRL +V DP
Sbjct: 149 ENLADVSVISSRNTGQRAVLKFAAATGATPIAGCFTPGTFTSQIQAAFREPRLPVVTDPR 208
Query: 425 QDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
DHQP+ EASYVN+P IALCNTDSPL +VDIAIPCN K +HS+G+MW
Sbjct: 209 VDHQPLMEASYVNLPTIALCNTDSPLCYVDIAIPCNNKGAHSVGVMW 255
Score = 33.1 bits (72), Expect = 4.7
Identities = 15/25 (60%), Positives = 18/25 (72%)
Frame = +2
Query: 38 TMSGGLDLLALSEEDVTKMLAATTH 112
TM G D+L ++EEDV K LAA TH
Sbjct: 110 TMFGAPDVLQMNEEDVLKFLAARTH 134
>UniRef50_Q9XZ65 Cluster: Laminin receptor-like protein/ p40
ribosome associated-like protein; n=7; Trypanosoma|Rep:
Laminin receptor-like protein/ p40 ribosome
associated-like protein - Trypanosoma cruzi
Length = 298
Score = 173 bits (421), Expect = 2e-42
Identities = 81/162 (50%), Positives = 107/162 (66%)
Frame = +2
Query: 80 DVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPAD 259
DV K++A H G +N + M+ Y++ R +GT++I+L TWEK E+P D
Sbjct: 34 DVQKLVAMHCHFGTKNRSNAMKKYIHSRTKEGTNIIDLHMTWEKLILAARVIAAVENPQD 93
Query: 260 VFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQP 439
V V S+R FGQRA+ KF+ G + +AGRF PG FTNQIQ F +PR+L+V DP D Q
Sbjct: 94 VTVCSTRLFGQRAIFKFSQLVGMSFLAGRFIPGTFTNQIQKKFMQPRVLLVTDPRTDQQA 153
Query: 440 ITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
EAS VNIPVIA C+TD+PL FVDIAIPCN + +SI +M+
Sbjct: 154 FREASLVNIPVIAFCDTDAPLEFVDIAIPCNDRRRYSISMMY 195
>UniRef50_A2FLG0 Cluster: Ribosomal protein, putative; n=7;
Trichomonas vaginalis G3|Rep: Ribosomal protein,
putative - Trichomonas vaginalis G3
Length = 256
Score = 168 bits (409), Expect = 7e-41
Identities = 88/169 (52%), Positives = 109/169 (64%), Gaps = 2/169 (1%)
Frame = +2
Query: 65 ALSEEDVTKM-LAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 241
A E V KM LAA +LG+ N++F M+ YV+ R DGTHVINL T+EK
Sbjct: 6 AADREAVIKMMLAAKVYLGSTNLSFGMKPYVFTCRKDGTHVINLAMTYEKIKLAARMIYA 65
Query: 242 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 421
E+P DV IS+++FG RAV KFA GA + RFTPG FTN F EPRL+IV DP
Sbjct: 66 VEEPKDVLAISTKSFGTRAVHKFAEFLGANYVEQRFTPGLFTNYSIKNFCEPRLMIVCDP 125
Query: 422 AQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL-MW 565
D Q + EA+Y NIP IALC+TD+ L +VD IPCNTK+ +S+GL MW
Sbjct: 126 NTDSQAVHEAAYANIPCIALCDTDAHLDYVDCVIPCNTKNKNSMGLVMW 174
>UniRef50_O15585 Cluster: Ribosomal protein SA (P40) / laminin
receptor; n=3; Entamoeba histolytica|Rep: Ribosomal
protein SA (P40) / laminin receptor - Entamoeba
histolytica
Length = 173
Score = 159 bits (387), Expect = 3e-38
Identities = 76/159 (47%), Positives = 100/159 (62%), Gaps = 2/159 (1%)
Frame = +2
Query: 56 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXX 235
D+L S ED+ M+A H+GA N+NF ME YVY+R + + NL +TWEK
Sbjct: 15 DILKPSAEDIKMMVACRVHIGATNLNFAMEEYVYERGNNNECIFNLMKTWEKLSLAARVI 74
Query: 236 XXX--EDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLI 409
E P+DV ++ R RA LKF +TG T +AGRFTPG+FTNQIQ F EPRL+I
Sbjct: 75 AGISNETPSDVVAVAGREMAHRASLKFMKYTGCTAVAGRFTPGSFTNQIQKKFMEPRLII 134
Query: 410 VLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIP 526
V DP+ DHQ + E+ Y+N+P I N+D+ L+ V IAIP
Sbjct: 135 VSDPSVDHQALRESGYINVPTIGFWNSDNRLKNVGIAIP 173
>UniRef50_A0ECJ9 Cluster: Chromosome undetermined scaffold_9, whole
genome shotgun sequence; n=4; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_9, whole genome shotgun
sequence - Paramecium tetraurelia
Length = 268
Score = 159 bits (387), Expect = 3e-38
Identities = 77/174 (44%), Positives = 114/174 (65%), Gaps = 4/174 (2%)
Frame = +2
Query: 56 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXX 235
D ++ E+D+ +++A+ H+G + ++F M+ YV R +G++++NL TW+
Sbjct: 31 DCMSRKEQDIKRLIASQCHVGTKQLHFDMKRYVSHRSDNGSYILNLEETWQHIKLAARVI 90
Query: 236 XXXEDPADVFVISSRAFGQRAVLKFAAHTGATPI-AGRFTPGAFTNQIQAA---FREPRL 403
E P DV V+SSR GQRAV+KFA +T A+ + R+TPG TNQ +A F+EP+L
Sbjct: 91 AAIEQPQDVMVVSSRPIGQRAVIKFAHYTQASSTRSARWTPGTLTNQSNSASGKFQEPQL 150
Query: 404 LIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
LIV DP D Q I EASYVNIPVIAL N+D+PL++VDI IP + + SI +++
Sbjct: 151 LIVTDPHLDRQAIVEASYVNIPVIALTNSDTPLQYVDIPIPVGNRETKSISMIY 204
>UniRef50_Q9AW71 Cluster: 40S ribosomal protein SSA; n=1; Guillardia
theta|Rep: 40S ribosomal protein SSA - Guillardia theta
(Cryptomonas phi)
Length = 199
Score = 138 bits (335), Expect = 6e-32
Identities = 66/164 (40%), Positives = 94/164 (57%)
Frame = +2
Query: 71 SEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXED 250
+E D+ K+L H+G M+ YV+K+R DG ++IN+ +T +K E
Sbjct: 4 NENDIKKLLICNVHIGLSACTQLMKVYVWKKRSDGIYIINILKTIQKIELAARAIISIEH 63
Query: 251 PADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQD 430
P + +SS Q A++KF+ I ++ PG TN+ F EPRLLI+ DP D
Sbjct: 64 PKHIIAVSSNNIHQTAIIKFSQFIQCNCIVDKWIPGKLTNKTSKLFEEPRLLIISDPLLD 123
Query: 431 HQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
Q + EASYVNIPVI++CNTDS L ++DIAIP N K +S L+
Sbjct: 124 KQALLEASYVNIPVISVCNTDSFLSYIDIAIPGNNKDRYSFALI 167
>UniRef50_UPI0000EB0B97 Cluster: UPI0000EB0B97 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB0B97 UniRef100
entry - Canis familiaris
Length = 258
Score = 136 bits (328), Expect = 4e-31
Identities = 71/155 (45%), Positives = 100/155 (64%)
Frame = +2
Query: 92 MLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVI 271
+L A THLG N +F+M +YKR +G ++NL R++EK + P++V VI
Sbjct: 1 LLVAGTHLGDTNPDFKMIHSIYKRETNG--ILNLERSYEKLLPVACTIVAVKHPSEVGVI 58
Query: 272 SSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEA 451
SSR GQ A+LK AA +GA+P G FT G FT+Q+QA+ RE LL++ DP DH + EA
Sbjct: 59 SSRNSGQWAMLKLAAASGASPTVGHFTSGTFTSQVQASCRELCLLLITDPRADHPFLMEA 118
Query: 452 SYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIG 556
YVN+ IAL N+ SPL + IAIP ++K +H++G
Sbjct: 119 PYVNLLTIALRNSQSPLHCMGIAIPHDSKGAHTVG 153
>UniRef50_Q8SS60 Cluster: 40S RIBOSOMAL PROTEIN SA or P40; n=1;
Encephalitozoon cuniculi|Rep: 40S RIBOSOMAL PROTEIN SA
or P40 - Encephalitozoon cuniculi
Length = 252
Score = 129 bits (311), Expect = 5e-29
Identities = 65/167 (38%), Positives = 95/167 (56%), Gaps = 1/167 (0%)
Frame = +2
Query: 56 DLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRG-DGTHVINLRRTWEKXXXXXXX 232
D + + +E V ++ + +HLG + N Y+Y R D ++I++ TWEK
Sbjct: 10 DSIKIPDEFVKLLIVSQSHLGGTSTNKSFARYLYGTRPRDRINIIDINATWEKLIIAARA 69
Query: 233 XXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIV 412
+ P+ + V+S++ FG++ V+KF GATPI GRF PG+FTN +PR+LIV
Sbjct: 70 FCGIKHPSSIAVVSTKTFGRKPVVKFCEAVGATPITGRFIPGSFTNSEVKRVYDPRVLIV 129
Query: 413 LDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 553
D D Q I E+ Y N+P IA NTD+ L VDIAIP N +S +I
Sbjct: 130 SDTYADKQAILESQYCNLPTIAFVNTDNSLVGVDIAIPMNNRSPSAI 176
>UniRef50_P95993 Cluster: 30S ribosomal protein S2P; n=13;
Archaea|Rep: 30S ribosomal protein S2P - Sulfolobus
solfataricus
Length = 231
Score = 120 bits (290), Expect = 2e-26
Identities = 57/161 (35%), Positives = 93/161 (57%)
Frame = +2
Query: 83 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 262
V L+A H+G + ME++VY+ R +G +V+++R+ E+ DP D+
Sbjct: 39 VDTYLSAGVHIGTHSCTKYMESFVYRVRAEGLYVLDVRKIDERLRIAAKFLSRY-DPQDI 97
Query: 263 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPI 442
V++SR + R V KFA G+ + GR PG FTN + + EP++L+V DP D Q I
Sbjct: 98 IVVASRPYAYRPVQKFAEVVGSRALVGRIIPGTFTNPYLSTYIEPKVLLVSDPRTDTQAI 157
Query: 443 TEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
EA+ V IP++A +TD+ + ++D+ IP N K S+ L++
Sbjct: 158 KEAAKVGIPIVAFADTDAKIDYIDLIIPANNKGRKSLALLY 198
>UniRef50_A7NTT5 Cluster: Chromosome chr18 scaffold_1, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr18 scaffold_1, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 201
Score = 117 bits (282), Expect = 2e-25
Identities = 56/95 (58%), Positives = 66/95 (69%), Gaps = 1/95 (1%)
Frame = +2
Query: 284 FGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVN 463
F Q A+LKFA +TGA IAGR TPG TNQ+Q +F EP LLI+ DP DHQPI E + N
Sbjct: 33 FQQGAILKFAQYTGAHAIAGRHTPGTLTNQLQTSFSEPYLLILTDPITDHQPIKEVALGN 92
Query: 464 IPVIALCNTDSPLRFVDIAIPCNTKSSHSIG-LMW 565
IP IA C+ DSP+R+VDI I N K H+IG L W
Sbjct: 93 IPTIAFCDIDSPMRYVDIDILTNNKGKHNIGCLFW 127
>UniRef50_P57712 Cluster: 30S ribosomal protein S2P; n=2;
Thermoplasma|Rep: 30S ribosomal protein S2P -
Thermoplasma acidophilum
Length = 199
Score = 116 bits (279), Expect = 4e-25
Identities = 58/168 (34%), Positives = 95/168 (56%)
Frame = +2
Query: 62 LALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXX 241
+ + EE+ K + H+G + + M+ Y++K R DG +++++++T K
Sbjct: 5 MLIPEEEYQK---SGVHIGTQVKSSDMKPYIFKIRNDGLYILDVKKTNSKLIVAGKMLAR 61
Query: 242 XEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 421
E P D+ V++ R + R V KFA TGAT I GRF PG TN ++E +++IV DP
Sbjct: 62 FE-PQDILVVAQRQYAFRPVAKFAEVTGATAITGRFNPGTLTNPSLKFYKEVKVIIVTDP 120
Query: 422 AQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
D Q + EA + IP+IALC+ ++ FVD+ IP N K S+ +++
Sbjct: 121 LADVQAMKEAVKIGIPIIALCDANNKTDFVDLIIPTNNKGRRSLAVIY 168
>UniRef50_A3AIV8 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (japonica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. japonica
(Rice)
Length = 280
Score = 116 bits (278), Expect = 5e-25
Identities = 54/101 (53%), Positives = 68/101 (67%)
Frame = +2
Query: 173 GTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFT 352
G +INL +TWEK E+P D+ V S+R +GQRAVLKFA +TGA IAGR T
Sbjct: 46 GIFIINLGKTWEKLQLAARVIVAIENPQDIIVQSARPYGQRAVLKFAQYTGAHAIAGRHT 105
Query: 353 PGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVI 475
PG FTNQ+Q +F EPRLLI+ DP DHQPI E++ P++
Sbjct: 106 PGTFTNQLQTSFSEPRLLILTDPRTDHQPIKESALETSPLL 146
>UniRef50_A1RWV4 Cluster: Ribosomal protein S2; n=2; Archaea|Rep:
Ribosomal protein S2 - Thermofilum pendens (strain Hrk
5)
Length = 214
Score = 115 bits (277), Expect = 7e-25
Identities = 58/157 (36%), Positives = 88/157 (56%)
Frame = +2
Query: 95 LAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVIS 274
LAA +G + + ME ++Y R DG +++++++T E+ DP+ V+S
Sbjct: 21 LAAGIRIGTKMKSKFMEPFIYSARPDGLYLLDVKKTDERIRIAAKMIARY-DPSKFVVVS 79
Query: 275 SRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEAS 454
R +G R V KF G P+ GR PG FTN + F E L++V DP D Q + EA
Sbjct: 80 GRQYGHRPVRKFCGLVGCKPMLGRVLPGTFTNPALSHFTEADLMMVTDPRVDEQAVVEAG 139
Query: 455 YVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
+ IPVIALC+TDSP+ VD+ IP N + ++ L++
Sbjct: 140 TMGIPVIALCDTDSPISNVDLIIPTNNRGRKALALIF 176
>UniRef50_P54109 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanococcus jannaschii
Length = 222
Score = 115 bits (276), Expect = 9e-25
Identities = 50/157 (31%), Positives = 86/157 (54%)
Frame = +2
Query: 95 LAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVIS 274
LA+ H+G + ME ++Y+ R DG +V+++R+T E+ E P D+ +S
Sbjct: 14 LASGIHIGTQQKTKDMEKFIYRVRSDGLYVLDVRKTDERLRIAAKFLARYE-PEDILAVS 72
Query: 275 SRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEAS 454
R + + +F +TG +AGRF PG TN F EP ++ + DP D Q + EA+
Sbjct: 73 RRIYTMGPLEEFGKYTGIRTVAGRFVPGTLTNPAYKGFMEPEVVFISDPRVDRQALKEAT 132
Query: 455 YVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
+ +P++ LC+T+ F+D+ IP N K ++ L++
Sbjct: 133 EIGVPIVGLCDTEHLTSFIDLVIPTNNKGKKAVALIY 169
>UniRef50_Q8TT39 Cluster: 30S ribosomal protein S2P; n=10;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Methanosarcina acetivorans
Length = 225
Score = 113 bits (272), Expect = 3e-24
Identities = 58/161 (36%), Positives = 90/161 (55%)
Frame = +2
Query: 83 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 262
+ + LAA H+G + M +VY+ R DG +V++++ T E+ DPA +
Sbjct: 40 IDEYLAAGVHIGTQQKTQDMMRFVYRVRTDGLYVLDIQSTDERIRVASKLLSHY-DPARI 98
Query: 263 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPI 442
V+SSR +GQ F+ G + GRF PG+ TN F EP ++IV DPA D Q +
Sbjct: 99 LVVSSRQYGQHPARMFSRALGTRAMLGRFIPGSLTNPQIHGFFEPDVIIVTDPAGDAQVL 158
Query: 443 TEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
EAS + +PV+ALC+T++ VD+ IP N K ++ L++
Sbjct: 159 KEASSIGVPVVALCDTNNLTSNVDLVIPTNNKGRKALSLVY 199
>UniRef50_Q9U5P8 Cluster: Putative uncharacterized protein; n=1;
Entodinium caudatum|Rep: Putative uncharacterized
protein - Entodinium caudatum
Length = 163
Score = 100 bits (239), Expect = 3e-20
Identities = 41/77 (53%), Positives = 59/77 (76%)
Frame = +2
Query: 335 IAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVD 514
+ GR++PG TNQ + EPRLLIV DP D+ I E+SYVN+PVIA+CN+D+ L++VD
Sbjct: 3 VTGRWSPGMLTNQTTKKYVEPRLLIVSDPRTDYNAILESSYVNLPVIAICNSDNMLKYVD 62
Query: 515 IAIPCNTKSSHSIGLMW 565
AIPCN ++++SI ++W
Sbjct: 63 CAIPCNNRNNYSIAMIW 79
>UniRef50_A3H8R8 Cluster: Ribosomal protein S2; n=1; Caldivirga
maquilingensis IC-167|Rep: Ribosomal protein S2 -
Caldivirga maquilingensis IC-167
Length = 215
Score = 99 bits (238), Expect = 4e-20
Identities = 57/163 (34%), Positives = 81/163 (49%), Gaps = 2/163 (1%)
Frame = +2
Query: 83 VTKMLAATTHLGAENVN--FQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPA 256
V + +AA LGA N Q +++ R DG + NL+R E+ P+
Sbjct: 18 VERYMAAAVRLGARVSNNYLQERGFIFSVRPDGLRIFNLKRIDERIRIAARMITRYP-PS 76
Query: 257 DVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQ 436
V V S++ + + + F G P+ GR PG TN + LL+V DP D Q
Sbjct: 77 RVMVHSTKPYAFKPIQMFCKFVGCLPVTGRLIPGTLTNPYLTHHIDIDLLMVADPKTDFQ 136
Query: 437 PITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
I EAS IPVIAL +TDS F+D+ IPCN K +S+ L++
Sbjct: 137 AINEASLTGIPVIALVDTDSDPTFIDLMIPCNNKGRNSLALVF 179
>UniRef50_P29202 Cluster: 30S ribosomal protein S2P; n=12;
Euryarchaeota|Rep: 30S ribosomal protein S2P -
Haloarcula marismortui (Halobacterium marismortui)
Length = 267
Score = 99.5 bits (237), Expect = 5e-20
Identities = 52/161 (32%), Positives = 83/161 (51%)
Frame = +2
Query: 83 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 262
V L A H+G + ME ++++ R DG +V+++ T E+ E P +
Sbjct: 82 VEDYLGAGVHIGTQQKTQDMERFIHRVRTDGLYVLDVSMTDERIRTAADFLSNYE-PEQI 140
Query: 263 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPI 442
SSR +G+ KFA GA GRF PG TN + EP +++V DP D Q +
Sbjct: 141 LAASSRQYGRFPAEKFAEAIGARVRTGRFIPGTLTNPDYDGYIEPDIVVVTDPIGDAQAV 200
Query: 443 TEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
EA V IPVIA+C++++ VD+ +P N K ++ +++
Sbjct: 201 KEAITVGIPVIAMCDSNNTTSNVDLVVPTNNKGRKALSVVY 241
>UniRef50_Q0DUK0 Cluster: Os03g0182600 protein; n=1; Oryza sativa
(japonica cultivar-group)|Rep: Os03g0182600 protein -
Oryza sativa subsp. japonica (Rice)
Length = 223
Score = 95.9 bits (228), Expect = 6e-19
Identities = 43/69 (62%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Frame = +2
Query: 362 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 541
FTNQ+Q +F EPRLLI+ DP DHQPI E++ NIP IA C+TDSP+R+VDI IP N K
Sbjct: 30 FTNQLQTSFSEPRLLILTDPRTDHQPIKESALGNIPTIAFCDTDSPMRYVDIGIPANNKG 89
Query: 542 SHSIG-LMW 565
+SIG L W
Sbjct: 90 RNSIGCLFW 98
>UniRef50_UPI0000EB1146 Cluster: UPI0000EB1146 related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB1146 UniRef100
entry - Canis familiaris
Length = 222
Score = 87.0 bits (206), Expect = 3e-16
Identities = 58/151 (38%), Positives = 74/151 (49%)
Frame = +2
Query: 110 HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSRAFG 289
HL N + Q++ YVYK++ DG +VIN + V SSR G
Sbjct: 1 HLDGTNFDLQIDEYVYKKKRDGMYVIN-----RSFCSQLEPLLPLKTQLMSVVTSSRTTG 55
Query: 290 QRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIP 469
Q+AVL FAA G+ P +GRFTPG T+Q+ QP + YVN+P
Sbjct: 56 QQAVLSFAAAVGSAPTSGRFTPGTLTDQV-------------------QPSLASQYVNLP 96
Query: 470 VIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
IAL + DS DIA PCN K HS+GLM
Sbjct: 97 PIALYDADSSWCSADIA-PCNIKGVHSVGLM 126
>UniRef50_Q74M65 Cluster: NEQ508; n=1; Nanoarchaeum equitans|Rep:
NEQ508 - Nanoarchaeum equitans
Length = 201
Score = 86.2 bits (204), Expect = 5e-16
Identities = 43/155 (27%), Positives = 75/155 (48%)
Frame = +2
Query: 101 ATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADVFVISSR 280
A H+G ++ M+ YV K R DG + ++R+ E+ E P ++ V+ R
Sbjct: 13 AGIHIGTRHLTKDMKPYVSKIREDGLAIFDIRKIDERLRLASKMLSYYE-PNEILVVGRR 71
Query: 281 AFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYV 460
+ KF+ T GR+ PG TN + EP ++++ DP D + +A
Sbjct: 72 ETAITPIKKFSEITKVKAFPGRYPPGTLTNPQLKYYMEPEVILITDPIMDKNALHDAYES 131
Query: 461 NIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
I ++ALC+T+ ++D IP N + S S+ L++
Sbjct: 132 GITILALCDTNHTKNYIDFCIPANNRGSKSLALIY 166
>UniRef50_Q3LVY7 Cluster: Ribosomal RNA S0; n=1; Bigelowiella
natans|Rep: Ribosomal RNA S0 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 211
Score = 85.8 bits (203), Expect = 6e-16
Identities = 41/161 (25%), Positives = 83/161 (51%)
Frame = +2
Query: 83 VTKMLAATTHLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPADV 262
++ ++ + ++GA V+F+M+ ++ K++ + + INL T++ +
Sbjct: 7 ISLLIYSQNYIGAAYVDFRMKNHIIKQKNNLNNKINLFTTYKNLIYLPSLLFSISSMRKL 66
Query: 263 FVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPI 442
+I ++ ++A+ + I + PG F+N+ +F P IV +P D + I
Sbjct: 67 AIIDTKCISRKAIKQICIALNCRGIFKNYIPGNFSNRQIKSFMLPEAAIVAEPKNDPRII 126
Query: 443 TEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLMW 565
E S +NIP+I +CNTD+ + F+D +P NT S S +++
Sbjct: 127 RELSNINIPIIGICNTDTNISFIDWVLPSNTNSKFSNAMIF 167
>UniRef50_Q4P1B8 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 251
Score = 79.8 bits (188), Expect = 4e-14
Identities = 51/139 (36%), Positives = 73/139 (52%), Gaps = 3/139 (2%)
Frame = +2
Query: 158 KRRGDGTHVINLRRTWEKXXXXXXXXXXX---EDPADVFVISSRAFGQRAVLKFAAHTGA 328
+R+ DG+ I + WEK ++PA++ V+SSR + AVL FA TGA
Sbjct: 12 RRQADGSFSIG--KKWEKIIFAARILATVVTLKNPAEIPVVSSRQYDYCAVLTFAGQTGA 69
Query: 329 TPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRF 508
IA RFTPG+ TN + F+E R++IV+DP HQ + +A F
Sbjct: 70 INIADRFTPGSSTNYVTRWFKETRVIIVIDPHVSHQAMHKA-----------------LF 112
Query: 509 VDIAIPCNTKSSHSIGLMW 565
VDIAIP N + HS+ ++W
Sbjct: 113 VDIAIPGNVRGRHSVVILW 131
>UniRef50_A0RY14 Cluster: Ribosomal protein S2; n=2;
Thermoprotei|Rep: Ribosomal protein S2 - Cenarchaeum
symbiosum
Length = 208
Score = 73.3 bits (172), Expect = 4e-12
Identities = 45/168 (26%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Frame = +2
Query: 71 SEEDVTKMLAATT--HLGAENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXX 244
S+++ + L T+ +G + M+ ++ GT+ ++L T +
Sbjct: 7 SDDEYMRNLITTSGISIGTQVKTKFMKQFISDTDPTGTYTLDLEAT-QGRIKAAAQFIEH 65
Query: 245 EDPADVFVISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPA 424
+++ V S + + + KFA G I RF PG TN + EP+LL+V DP
Sbjct: 66 TGASELIVCSGKDSARVPIRKFAELVGCKDIHKRFMPGTLTNPDLPKYMEPKLLLVCDPQ 125
Query: 425 QDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI-GLMW 565
D Q +TEA+ IPVI + N+D+ +D+ IP N + ++ + W
Sbjct: 126 VDAQAVTEATNAGIPVIGIANSDNVTSRLDVIIPANNRGRGALAAIFW 173
>UniRef50_UPI0000DD86B9 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1; Homo
sapiens|Rep: PREDICTED: similar to 40S ribosomal protein
SA (p40) (34/67 kDa laminin receptor) - Homo sapiens
Length = 99
Score = 63.3 bits (147), Expect = 4e-09
Identities = 30/45 (66%), Positives = 32/45 (71%)
Frame = +2
Query: 299 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDH 433
VLK TGA PIAG FTPG FTNQIQAAF E + L+V DP DH
Sbjct: 45 VLKRTTATGAIPIAGHFTPGNFTNQIQAAFSELQFLVVTDPRADH 89
Score = 45.2 bits (102), Expect = 0.001
Identities = 19/34 (55%), Positives = 27/34 (79%)
Frame = +2
Query: 41 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQM 142
MSG LD+L + E+D+ +LAA THLG+ N++FQM
Sbjct: 1 MSGILDILPMKEDDILNLLAAGTHLGSPNLDFQM 34
>UniRef50_UPI00015531E2 Cluster: PREDICTED: similar to Ribosomal
protein SA; n=1; Mus musculus|Rep: PREDICTED: similar to
Ribosomal protein SA - Mus musculus
Length = 181
Score = 60.9 bits (141), Expect = 2e-08
Identities = 39/102 (38%), Positives = 50/102 (49%), Gaps = 1/102 (0%)
Frame = +2
Query: 155 YKRRGDGTHVINLRRTWEKXXXXXXXXXXX-EDPADVFVISSRAFGQRAVLKFAAHTGAT 331
Y + DGT++ L RTWEK E+ +V +ISS TGA
Sbjct: 57 YLEKSDGTYIRYLNRTWEKLLLLEAQTTVANENSTNVRLISSLGTN---------FTGAI 107
Query: 332 PIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASY 457
P AG F P F N IQA F+ LL+V P + QP+TEAS+
Sbjct: 108 PTAGSFIPRPFINLIQATFQVTCLLVVTGPKMNQQPLTEASF 149
>UniRef50_UPI0000E48DD5 Cluster: PREDICTED: similar to 34/67 kD
laminin binding protein; n=1; Strongylocentrotus
purpuratus|Rep: PREDICTED: similar to 34/67 kD laminin
binding protein - Strongylocentrotus purpuratus
Length = 220
Score = 60.5 bits (140), Expect = 3e-08
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Frame = +2
Query: 41 MSGGLDLLALSEEDVTKMLAATTHLGAENVNFQMETYVYKRRGDGT-HVINL 193
MSGGL+ LAL E+DV K LA+ H+G+ N++++M Y+YKR+ DG H I L
Sbjct: 1 MSGGLECLALKEDDVQKFLASGAHIGSSNMDYKMAPYIYKRKPDGNIHSIGL 52
>UniRef50_P75560 Cluster: 30S ribosomal protein S2; n=4;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pneumoniae
Length = 294
Score = 53.2 bits (122), Expect = 4e-06
Identities = 26/67 (38%), Positives = 37/67 (55%)
Frame = +2
Query: 362 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 541
F +++ R P LLIV DP + + EA+ + IPV+ALCNT++ VD IP N
Sbjct: 162 FFGGVKSLKRLPNLLIVDDPVYEKNAVAEANILRIPVVALCNTNTNPELVDFIIPANNHQ 221
Query: 542 SHSIGLM 562
S L+
Sbjct: 222 PQSTCLL 228
>UniRef50_Q8MSF9 Cluster: GM15484p; n=1; Drosophila
melanogaster|Rep: GM15484p - Drosophila melanogaster
(Fruit fly)
Length = 92
Score = 52.4 bits (120), Expect = 7e-06
Identities = 28/67 (41%), Positives = 33/67 (49%)
Frame = -3
Query: 210 FSHVRRRLITCVPSPRRL*TYVSIWKLTFSAPKWXXXXXXXXXXXXXXXXXSNPPDIVAF 31
FS V RL PS RRL TY SIWKLTFS P+W S PPD++ +
Sbjct: 21 FSQVLPRLRMLTPSARRLYTYCSIWKLTFSEPRWVVATNILVMSSSLRDRISKPPDMLTW 80
Query: 30 VRVTTKR 10
+ T R
Sbjct: 81 KELRTSR 87
>UniRef50_Q9PRB9 Cluster: 30S ribosomal protein S2; n=1; Ureaplasma
parvum|Rep: 30S ribosomal protein S2 - Ureaplasma parvum
(Ureaplasma urealyticum biotype 1)
Length = 349
Score = 52.0 bits (119), Expect = 9e-06
Identities = 28/67 (41%), Positives = 39/67 (58%)
Frame = +2
Query: 362 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 541
F I+ + P +LI++DP D I EA +NIPVIAL NT++ + +D IP N S
Sbjct: 199 FYGGIKNMKQRPDVLILVDPVNDVNAIKEARKLNIPVIALANTNADPQLIDYIIPVNNYS 258
Query: 542 SHSIGLM 562
SI L+
Sbjct: 259 VKSITLI 265
>UniRef50_Q7NAW2 Cluster: RpsB; n=1; Mycoplasma gallisepticum|Rep:
RpsB - Mycoplasma gallisepticum
Length = 323
Score = 51.2 bits (117), Expect = 2e-05
Identities = 22/56 (39%), Positives = 35/56 (62%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
P +L++ DP ++ +TEA + IPVIALCNT+S + + IP N + S+ L+
Sbjct: 201 PHVLVIDDPIKEKNAVTEARKLRIPVIALCNTNSDPNVITLPIPANNYNIRSVTLL 256
>UniRef50_Q5A8K1 Cluster: Likely mitochondrial ribosomal protein;
n=3; Saccharomycetales|Rep: Likely mitochondrial
ribosomal protein - Candida albicans (Yeast)
Length = 460
Score = 50.4 bits (115), Expect = 3e-05
Identities = 48/192 (25%), Positives = 80/192 (41%), Gaps = 32/192 (16%)
Frame = +2
Query: 83 VTKMLAATTHLGAENVNFQ--METYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXXEDPA 256
+ K++AA HLG +F+ M+ ++Y D H+I+L +T EK +
Sbjct: 238 IAKLMAAGCHLGHSTSSFRPSMQPFIYGIY-DKVHIIDLNKTLEKLTLACKVIEGVVEKG 296
Query: 257 DVFVI----SSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTN---------QIQAAFR-- 391
V + + + Q A++K + + + R+ PG TN QI+
Sbjct: 297 GVVLYVGTHKNNSSIQEALVKASERSHGYYVNKRWIPGTITNYTEVTKQYGQIKTKMEVD 356
Query: 392 ---------------EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIP 526
+P L+++L+P ++ I E IP I LC+TD + IP
Sbjct: 357 MKDQKITTKNSNKIIKPDLVVLLNPVENRNCIKECISAGIPTIGLCDTDMEPSLLTYPIP 416
Query: 527 CNTKSSHSIGLM 562
CN S S+ LM
Sbjct: 417 CNDDSVRSVNLM 428
>UniRef50_P19679 Cluster: 30S ribosomal protein S2; n=3;
Firmicutes|Rep: 30S ribosomal protein S2 - Spiroplasma
citri
Length = 359
Score = 49.2 bits (112), Expect = 7e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Frame = +2
Query: 362 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 541
F I+ P+ L V+DP ++H + EA + IPVIA+C+T+ +D IP N +
Sbjct: 148 FLGGIKGMKELPQALFVVDPKEEHIAVREARKLRIPVIAICDTNVDPVPIDYIIPANDDT 207
Query: 542 SHSIGLM 562
S SI ++
Sbjct: 208 SRSIAII 214
>UniRef50_Q6F0Q4 Cluster: 30S ribosomal protein S2; n=4;
Mollicutes|Rep: 30S ribosomal protein S2 - Mesoplasma
florum (Acholeplasma florum)
Length = 266
Score = 47.6 bits (108), Expect = 2e-04
Identities = 23/56 (41%), Positives = 31/56 (55%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
P LIV+DP D + EA +NIPVI LC+T+ V + IP N S+ +M
Sbjct: 160 PAALIVVDPKSDEIAVKEAIKLNIPVIGLCDTNVDPDIVTLPIPANDDLQESVNIM 215
>UniRef50_Q8EUG1 Cluster: Ribosomal protein S2; n=1; Mycoplasma
penetrans|Rep: Ribosomal protein S2 - Mycoplasma
penetrans
Length = 367
Score = 47.2 bits (107), Expect = 3e-04
Identities = 23/56 (41%), Positives = 34/56 (60%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
P+++I+ DP + I EA + IPVIA+CNT++ VD IP N S S+ L+
Sbjct: 263 PKVIILTDPEINKIAIKEARNLGIPVIAICNTNANPDLVDYVIPANNHSIKSVYLL 318
>UniRef50_Q9TCC3 Cluster: Ribosomal protein S2; n=1; Nephroselmis
olivacea|Rep: Ribosomal protein S2 - Nephroselmis
olivacea
Length = 235
Score = 46.4 bits (105), Expect = 5e-04
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +2
Query: 377 QAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 541
Q +P LLIVL+P+++ + I EA +NIPVIA+ ++D+ L + IP N S
Sbjct: 156 QTPISKPDLLIVLNPSKNKEAINEAWVLNIPVIAIVDSDTNLSKITYPIPGNNSS 210
>UniRef50_Q9ZE61 Cluster: 30S ribosomal protein S2; n=10;
Rickettsieae|Rep: 30S ribosomal protein S2 - Rickettsia
prowazekii
Length = 296
Score = 46.0 bits (104), Expect = 6e-04
Identities = 25/56 (44%), Positives = 35/56 (62%)
Frame = +2
Query: 392 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 559
+P LL+V+D ++H I EA +NIPV+A+ +T+S VD IP N S SI L
Sbjct: 161 KPDLLVVIDTNKEHIAINEAVKLNIPVVAVVDTNSNPDNVDYPIPGNDDSIRSIRL 216
>UniRef50_O84687 Cluster: 30S ribosomal protein S2; n=32;
Chlamydiales|Rep: 30S ribosomal protein S2 - Chlamydia
trachomatis
Length = 282
Score = 45.2 bits (102), Expect = 0.001
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
P LLIV+DP + + EA + IPV+AL +T+ ++ IPCN S SI L+
Sbjct: 160 PGLLIVIDPGYERIAVAEAGKLGIPVMALVDTNCDPTPINHVIPCNDDSMKSIRLI 215
>UniRef50_Q9RU79 Cluster: 30S ribosomal protein S2; n=7;
Bacteria|Rep: 30S ribosomal protein S2 - Deinococcus
radiodurans
Length = 264
Score = 44.8 bits (101), Expect = 0.001
Identities = 24/67 (35%), Positives = 37/67 (55%)
Frame = +2
Query: 362 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 541
F I+ R P + V+DP ++ + EA+ + IPVIAL +TDS +D +P N +
Sbjct: 147 FVGGIRKMNRLPDAIFVVDPTKEVIAVQEANKLGIPVIALADTDSDPDVIDYIVPGNDDA 206
Query: 542 SHSIGLM 562
SI L+
Sbjct: 207 IRSIQLI 213
>UniRef50_Q9TM33 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Cyanidium caldarium|Rep: Chloroplast 30S ribosomal
protein S2 - Cyanidium caldarium
Length = 243
Score = 44.8 bits (101), Expect = 0.001
Identities = 20/67 (29%), Positives = 40/67 (59%)
Frame = +2
Query: 362 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 541
+ N I+ + P ++I++DP+++ I+E +NIP I + +T+ + V++ IP N S
Sbjct: 146 YLNGIKGMKKPPDIIILVDPSREKTTISECQKLNIPTIGILDTNCNPKSVNVPIPANDDS 205
Query: 542 SHSIGLM 562
+I L+
Sbjct: 206 IKAIDLI 212
>UniRef50_Q7NJK2 Cluster: 30S ribosomal protein S2; n=154; cellular
organisms|Rep: 30S ribosomal protein S2 - Gloeobacter
violaceus
Length = 274
Score = 44.4 bits (100), Expect = 0.002
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +2
Query: 389 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
R+P +L+V+D ++ + EA +NIP+++L +T+ D+ IP N + SI L+
Sbjct: 156 RKPDILLVVDQRREQNAVMEARRLNIPIVSLLDTNCDPDLTDVGIPANDDAIRSIRLI 213
>UniRef50_Q6BNP9 Cluster: Debaryomyces hansenii chromosome E of
strain CBS767 of Debaryomyces hansenii; n=2;
Saccharomycetaceae|Rep: Debaryomyces hansenii chromosome
E of strain CBS767 of Debaryomyces hansenii -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 468
Score = 43.6 bits (98), Expect = 0.003
Identities = 20/57 (35%), Positives = 30/57 (52%)
Frame = +2
Query: 392 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
+P L+++L+P ++ I E IP I LC+TD + IPCN S + LM
Sbjct: 362 KPDLIVLLNPVENRNCINECIKQRIPTIGLCDTDMEPSLLTYPIPCNDDSMRASSLM 418
>UniRef50_Q6MGY6 Cluster: 30S ribosomal protein S2; n=3;
Deltaproteobacteria|Rep: 30S ribosomal protein S2 -
Bdellovibrio bacteriovorus
Length = 313
Score = 42.7 bits (96), Expect = 0.006
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 559
P + V+D ++H + EA + IPV+A+ +T+S VD AIP N + SI L
Sbjct: 158 PSAMFVVDLPKEHIAVAEAKRLGIPVVAIADTNSDPESVDFAIPGNDDAIRSIKL 212
>UniRef50_Q98Q36 Cluster: 30S ribosomal protein S2; n=2;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
pulmonis
Length = 330
Score = 42.3 bits (95), Expect = 0.008
Identities = 20/57 (35%), Positives = 32/57 (56%)
Frame = +2
Query: 392 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
+P +IV+DP D + EA + +I + ++D+ FVD+ IP N S SI L+
Sbjct: 176 QPNFMIVVDPNVDRIAVKEARDKGVKIIGILDSDANPDFVDLGIPANDDSIKSISLI 232
>UniRef50_Q88VJ4 Cluster: 30S ribosomal protein S2; n=5;
Bacteria|Rep: 30S ribosomal protein S2 - Lactobacillus
plantarum
Length = 267
Score = 42.3 bits (95), Expect = 0.008
Identities = 18/67 (26%), Positives = 39/67 (58%)
Frame = +2
Query: 362 FTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 541
F I+ R P ++ ++DP ++ + EA +NIP++A+ +T++ +D+ IP N +
Sbjct: 147 FLGGIEDMPRIPDVIFIVDPRKEQIAVKEAQKLNIPIVAMVDTNTDPDDIDVIIPSNDDA 206
Query: 542 SHSIGLM 562
++ L+
Sbjct: 207 IRAVRLI 213
>UniRef50_A6EB55 Cluster: 30S ribosomal subunit protein S2; n=3;
Bacteroidetes/Chlorobi group|Rep: 30S ribosomal subunit
protein S2 - Pedobacter sp. BAL39
Length = 276
Score = 41.9 bits (94), Expect = 0.010
Identities = 19/58 (32%), Positives = 34/58 (58%)
Frame = +2
Query: 389 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
R P + ++D ++H ++EA +NIP A+ +T+S +D IP N ++ SI L+
Sbjct: 156 RLPAAIFLIDVKKEHIAVSEALKLNIPTFAMVDTNSDPSNIDFPIPANDDATKSISLI 213
>UniRef50_Q6PDB3 Cluster: LOC204010 protein; n=2; Eutheria|Rep:
LOC204010 protein - Homo sapiens (Human)
Length = 197
Score = 41.9 bits (94), Expect = 0.010
Identities = 27/68 (39%), Positives = 33/68 (48%), Gaps = 6/68 (8%)
Frame = +2
Query: 299 VLKFAAHTGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP------AQDHQPITEASYV 460
+LKFAA TGATPIAG FTPG F + + L L P +Q H +T +
Sbjct: 1 MLKFAAATGATPIAGHFTPGTFLTRSRQPTGSHGFLWFLTPGLTTSLSQRHLVLTHLPLL 60
Query: 461 NIPVIALC 484
I LC
Sbjct: 61 YATQILLC 68
>UniRef50_P32902 Cluster: 37S ribosomal protein MRP4, mitochondrial
precursor; n=6; Saccharomycetales|Rep: 37S ribosomal
protein MRP4, mitochondrial precursor - Saccharomyces
cerevisiae (Baker's yeast)
Length = 394
Score = 41.5 bits (93), Expect = 0.013
Identities = 20/57 (35%), Positives = 31/57 (54%)
Frame = +2
Query: 392 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
+P LL+VL+P ++ + EA +P IA+ +TDS V IP N S S+ +
Sbjct: 316 KPDLLVVLNPTENRNALLEAIKSRVPTIAIIDTDSEPSLVTYPIPGNDDSLRSVNFL 372
>UniRef50_Q7UKH4 Cluster: 30S ribosomal protein S2; n=3;
Planctomycetaceae|Rep: 30S ribosomal protein S2 -
Rhodopirellula baltica
Length = 260
Score = 41.5 bits (93), Expect = 0.013
Identities = 18/65 (27%), Positives = 35/65 (53%)
Frame = +2
Query: 368 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSH 547
N ++ R P ++ ++DP ++ + EA + I +AL +TDS +D+ IP N
Sbjct: 149 NGLRTMNRLPEVMFIVDPGKERNAVREAKRLGITTVALIDTDSDPSQIDLPIPGNDDGIR 208
Query: 548 SIGLM 562
S+ ++
Sbjct: 209 SVEMI 213
>UniRef50_A6YEB6 Cluster: Ribosomal protein S2; n=1; Chlorokybus
atmophyticus|Rep: Ribosomal protein S2 - Chlorokybus
atmophyticus (Soil alga)
Length = 442
Score = 41.1 bits (92), Expect = 0.018
Identities = 18/41 (43%), Positives = 29/41 (70%)
Frame = +2
Query: 389 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFV 511
+ P L+I L+P Q+ PI EA +NIP+IAL ++++P R +
Sbjct: 365 KRPNLIIFLNPNQNEIPIREAFNLNIPIIALVDSNTPPRLL 405
>UniRef50_A6GAK0 Cluster: Ribosomal protein S2; n=2;
Deltaproteobacteria|Rep: Ribosomal protein S2 -
Plesiocystis pacifica SIR-1
Length = 301
Score = 40.7 bits (91), Expect = 0.023
Identities = 18/56 (32%), Positives = 34/56 (60%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
P + V+DP ++H ++EA+ + +PV+AL +T++ + IP N + SI L+
Sbjct: 174 PGAIFVIDPNREHIAVSEANRLGVPVVALADTNADPSKIQYIIPGNDDAIRSIKLI 229
>UniRef50_A3HWY0 Cluster: 30S ribosomal protein S2; n=1;
Algoriphagus sp. PR1|Rep: 30S ribosomal protein S2 -
Algoriphagus sp. PR1
Length = 253
Score = 40.7 bits (91), Expect = 0.023
Identities = 21/58 (36%), Positives = 32/58 (55%)
Frame = +2
Query: 389 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
R P L ++D ++H I EA + IPV AL +T+S V+ IP N + S+ L+
Sbjct: 156 RLPAALFIVDIKREHIAIAEAKKLGIPVYALVDTNSNPNEVEFPIPANDDAFKSVSLL 213
>UniRef50_Q7MX41 Cluster: 30S ribosomal protein S2; n=23;
Bacteroidetes|Rep: 30S ribosomal protein S2 -
Porphyromonas gingivalis (Bacteroides gingivalis)
Length = 281
Score = 40.7 bits (91), Expect = 0.023
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 389 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
R P L V+D ++H + EA+ + IPV A+ +T+S +D IP N + +I L+
Sbjct: 156 RLPSALFVVDVMKEHIAVREANRLGIPVFAMVDTNSDPSLIDYVIPSNDDALKAIELI 213
>UniRef50_Q3B5U0 Cluster: Ribosomal protein S2; n=1; Pelodictyon
luteolum DSM 273|Rep: Ribosomal protein S2 - Pelodictyon
luteolum (strain DSM 273) (Chlorobium luteolum (strain
DSM273))
Length = 253
Score = 40.3 bits (90), Expect = 0.031
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +2
Query: 389 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
R P L ++D ++H I EA + IP+ A+ +T+ VD IP N + SI LM
Sbjct: 156 RLPAALFIVDIKKEHIAIKEARSLGIPIFAMVDTNCDPEQVDYVIPANDDAIRSIQLM 213
>UniRef50_A3ZXT5 Cluster: Ribosomal protein S2; n=1; Blastopirellula
marina DSM 3645|Rep: Ribosomal protein S2 -
Blastopirellula marina DSM 3645
Length = 243
Score = 39.9 bits (89), Expect = 0.041
Identities = 20/64 (31%), Positives = 33/64 (51%)
Frame = +2
Query: 368 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSH 547
N ++ R P L+++DP ++ I EA + I +AL +TD +D+ +P N
Sbjct: 153 NGLRTMNRLPETLVIVDPKKEKNAIREAHSLGITTVALTDTDCDPDEIDLPVPGNDDGIR 212
Query: 548 SIGL 559
SI L
Sbjct: 213 SIEL 216
>UniRef50_Q8KBK6 Cluster: 30S ribosomal protein S2; n=3;
Bacteria|Rep: 30S ribosomal protein S2 - Chlorobium
tepidum
Length = 249
Score = 39.9 bits (89), Expect = 0.041
Identities = 21/58 (36%), Positives = 31/58 (53%)
Frame = +2
Query: 389 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
R P L V+D ++H + EA + IP+ A+ +T+ VD IP N + SI LM
Sbjct: 157 RLPAALFVVDIKKEHIAVKEARSLGIPIFAMVDTNCDPDEVDYVIPANDDAIRSIDLM 214
>UniRef50_Q1AW68 Cluster: Ribosomal protein S2; n=3; Bacteria|Rep:
Ribosomal protein S2 - Rubrobacter xylanophilus (strain
DSM 9941 / NBRC 16129)
Length = 306
Score = 39.5 bits (88), Expect = 0.054
Identities = 20/58 (34%), Positives = 33/58 (56%)
Frame = +2
Query: 389 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
R P + V+DP ++ + EA+ + IPV+AL +T+ +D IP N + SI L+
Sbjct: 159 RLPGAVYVVDPKREELLVREANRLRIPVVALTDTNCDPDVIDYVIPGNDDAIRSISLI 216
>UniRef50_A1B8E9 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep:
Ribosomal protein S2 - Paracoccus denitrificans (strain
Pd 1222)
Length = 261
Score = 39.1 bits (87), Expect = 0.071
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 559
P LL V+D ++ I EA + IPV+A+ +T+ + VD IP N ++ +I L
Sbjct: 161 PDLLFVIDVNKEDLAIAEAKKLGIPVVAVVDTNCSPKGVDYVIPGNDDAARAIAL 215
>UniRef50_Q5KI10 Cluster: Ribosomal protein, putative; n=1;
Filobasidiella neoformans|Rep: Ribosomal protein,
putative - Cryptococcus neoformans (Filobasidiella
neoformans)
Length = 307
Score = 39.1 bits (87), Expect = 0.071
Identities = 42/176 (23%), Positives = 78/176 (44%), Gaps = 13/176 (7%)
Frame = +2
Query: 74 EEDVTKMLAATTHLG-AENVNFQMET-YVYKRRGDGTHVINLRRTWE-KXXXXXXXXXXX 244
E ++ +LA+ LG A N+ T Y+Y +R G +I+L +T
Sbjct: 98 EATLSTLLASGAALGHAANITSHAYTPYIYGKRA-GLSIIDLDQTLPILRRTAALVKDIV 156
Query: 245 EDPADVFVISSRAFGQRAVLKFAAHTGATPIA-GRFTPGAFTNQ---------IQAAFRE 394
+ V ++ +R Q+ + K A G++ PG TN + +++
Sbjct: 157 KADGVVLIVGTRPGHQKMIQKAKERLEDNGFAVGQWIPGLLTNAETFFGMKPLLDKSYK- 215
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
P L+I L+ +++ I E + +IP + + +TD+ R V IP N +S + L+
Sbjct: 216 PDLVIFLNASENTPAIRECTSRHIPTVGIVDTDTDPRLVTYPIPANMESMRTAELI 271
>UniRef50_Q4P627 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 329
Score = 38.7 bits (86), Expect = 0.094
Identities = 19/48 (39%), Positives = 31/48 (64%)
Frame = +2
Query: 350 TPGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTD 493
T A TN++ + +P L+IVL+P ++ I EA+ NIP IA+ ++D
Sbjct: 238 TGTANTNRLASQTLQPDLVIVLNPIENSFAIREATQANIPTIAITDSD 285
>UniRef50_Q2GCI4 Cluster: Ribosomal protein S2; n=1; Neorickettsia
sennetsu str. Miyayama|Rep: Ribosomal protein S2 -
Neorickettsia sennetsu (strain Miyayama)
Length = 298
Score = 38.3 bits (85), Expect = 0.12
Identities = 18/53 (33%), Positives = 30/53 (56%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 553
P ++ V+DP ++H + EA + IPV+A+ +T+ + AIP N S I
Sbjct: 162 PNIIFVIDPKKEHIAVEEAWKLGIPVVAVVDTNCDPSKITYAIPGNDDSLRCI 214
>UniRef50_A5BFJ2 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 159
Score = 38.3 bits (85), Expect = 0.12
Identities = 19/47 (40%), Positives = 29/47 (61%)
Frame = +2
Query: 383 AFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 523
+F P + I L +QPI EA+ N P+IA C+TDSP++ V + +
Sbjct: 65 SFPNPSIKITLH----YQPIKEAALGNTPIIAFCDTDSPMQCVALLL 107
>UniRef50_Q5YS61 Cluster: 30S ribosomal protein S2; n=60;
Bacteria|Rep: 30S ribosomal protein S2 - Nocardia
farcinica
Length = 285
Score = 38.3 bits (85), Expect = 0.12
Identities = 20/56 (35%), Positives = 31/56 (55%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
P + V+D ++H + EA +NIPVIA+ +T+ VD IP N + S L+
Sbjct: 158 PSAIWVVDTNKEHIAVGEARKLNIPVIAILDTNCDPDLVDYPIPGNDDAIRSAALL 213
>UniRef50_O78482 Cluster: Chloroplast 30S ribosomal protein S2; n=3;
Eukaryota|Rep: Chloroplast 30S ribosomal protein S2 -
Guillardia theta (Cryptomonas phi)
Length = 235
Score = 38.3 bits (85), Expect = 0.12
Identities = 20/65 (30%), Positives = 36/65 (55%)
Frame = +2
Query: 368 NQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSH 547
N I+ R P L++++D ++ + E + IP+I++ +T+ DIAIP N +
Sbjct: 148 NGIKNMKRLPDLVVIVDQKRETTAVQECRTLGIPIISILDTNCNPDLTDIAIPGNDDAIR 207
Query: 548 SIGLM 562
SI L+
Sbjct: 208 SIKLI 212
>UniRef50_UPI00005A3143 Cluster: PREDICTED: similar to 40S ribosomal
protein SA (p40) (34/67 kDa laminin receptor); n=1;
Canis lupus familiaris|Rep: PREDICTED: similar to 40S
ribosomal protein SA (p40) (34/67 kDa laminin receptor)
- Canis familiaris
Length = 160
Score = 37.9 bits (84), Expect = 0.16
Identities = 21/39 (53%), Positives = 24/39 (61%)
Frame = +2
Query: 320 TGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDPAQDHQ 436
T A+PI+G F NQ QAA EPRLL+V P DHQ
Sbjct: 17 TAASPISG-----TFANQTQAARWEPRLLMVTHPRADHQ 50
>UniRef50_O13970 Cluster: Mitochondrial ribosomal protein subunit
S2; n=1; Schizosaccharomyces pombe|Rep: Mitochondrial
ribosomal protein subunit S2 - Schizosaccharomyces pombe
(Fission yeast)
Length = 263
Score = 37.9 bits (84), Expect = 0.16
Identities = 16/49 (32%), Positives = 27/49 (55%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 541
P L+++L+P ++ EA ++P I + +TD+ R V IP N S
Sbjct: 180 PDLMVILNPLENKSACLEAQKTHVPTIGIIDTDADPRMVTYPIPANDDS 228
>UniRef50_Q83SL4 Cluster: 30S ribosomal protein S2; n=330;
Bacteria|Rep: 30S ribosomal protein S2 - Shigella
flexneri
Length = 241
Score = 37.9 bits (84), Expect = 0.16
Identities = 20/55 (36%), Positives = 30/55 (54%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 559
P L V+D +H I EA+ + IPV A+ +T+S VD IP N + ++ L
Sbjct: 158 PDALFVIDADHEHIAIKEANNLGIPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTL 212
>UniRef50_A7H716 Cluster: Ribosomal protein S2; n=5; Bacteria|Rep:
Ribosomal protein S2 - Anaeromyxobacter sp. Fw109-5
Length = 315
Score = 37.5 bits (83), Expect = 0.22
Identities = 19/62 (30%), Positives = 34/62 (54%)
Frame = +2
Query: 374 IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 553
I+ R P + V+D ++H + EA+ + IPV+A+ +T+ ++ IP N + SI
Sbjct: 159 IKEMSRLPAAIFVIDTKKEHIAVHEANRLGIPVVAVVDTNCDPEGIEYVIPGNDDAIRSI 218
Query: 554 GL 559
L
Sbjct: 219 RL 220
>UniRef50_Q8M1D9 Cluster: Ribosomal protein S2; n=1;
Chaetosphaeridium globosum|Rep: Ribosomal protein S2 -
Chaetosphaeridium globosum
Length = 191
Score = 37.5 bits (83), Expect = 0.22
Identities = 38/165 (23%), Positives = 68/165 (41%), Gaps = 12/165 (7%)
Frame = +2
Query: 83 VTKMLAATTHLGAENVNFQMET--YVYKRRGDGTHVINLRRTWE--KXXXXXXXXXXXED 250
++K+L HLG + + ++Y R + + +L +T + +
Sbjct: 9 ISKLLKINAHLGRPKLRTSHVSRYFLYGLRSNTRAIFDLEKTLTCIRRACHFLESILDKQ 68
Query: 251 PADVFVISSRAFGQRAVLKFAA-HTGATPIAGRFTPGAFTN------QIQAAFREPRLLI 409
+FV A++K A T + I ++ G TN ++ P LI
Sbjct: 69 GCILFVSEGPNSPYNAIIKETALKTNQSFITTKWIGGLLTNWKHISYYNHLSYDRPSCLI 128
Query: 410 VLDPAQDHQPITEASYVNIPVIALCNTDSPLRF-VDIAIPCNTKS 541
V +P + I EA+ + IPV++L N++ P +D IP N S
Sbjct: 129 VFNPCLNFTAIQEANTLGIPVVSLMNSNVPNHLKIDYPIPVNHNS 173
>UniRef50_Q39F43 Cluster: Ribosomal protein S2; n=11;
Proteobacteria|Rep: Ribosomal protein S2 - Burkholderia
sp. (strain 383) (Burkholderia cepacia (strain ATCC
17760/ NCIB 9086 / R18194))
Length = 246
Score = 37.1 bits (82), Expect = 0.29
Identities = 19/55 (34%), Positives = 30/55 (54%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 559
P + V+D +TEA+ + +PVIA+ +T+ VD IP N SS ++ L
Sbjct: 157 PDAIFVVDVGYHKIAVTEANKLGVPVIAVVDTNHSPEGVDYVIPGNDDSSKAVAL 211
>UniRef50_A1ZN20 Cluster: Ribosomal protein S2; n=6;
Bacteroidetes/Chlorobi group|Rep: Ribosomal protein S2 -
Microscilla marina ATCC 23134
Length = 272
Score = 37.1 bits (82), Expect = 0.29
Identities = 20/55 (36%), Positives = 29/55 (52%)
Frame = +2
Query: 389 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 553
R P L V+D ++H I EA + IPV A+ +T+S V +P N + SI
Sbjct: 156 RLPAALFVVDVKREHIAIAEAHKLGIPVFAMVDTNSNPGAVQFPVPANDDAFKSI 210
>UniRef50_Q1MRE3 Cluster: Ribosomal protein S2; n=4; Bacteria|Rep:
Ribosomal protein S2 - Lawsonia intracellularis (strain
PHE/MN1-00)
Length = 291
Score = 36.7 bits (81), Expect = 0.38
Identities = 16/57 (28%), Positives = 33/57 (57%)
Frame = +2
Query: 389 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 559
R P+L+ ++DP +++ + E + IP++A+ +T+ +D IP N + +I L
Sbjct: 156 RLPQLIFIIDPHRENIAVKEGRKLGIPIMAVTDTNCDPDLIDYIIPGNDDAIRAIKL 212
>UniRef50_A7Q681 Cluster: Chromosome undetermined scaffold_55, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_55, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 223
Score = 36.3 bits (80), Expect = 0.50
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 431 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 523
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 141 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 171
>UniRef50_A5BWW8 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 208
Score = 36.3 bits (80), Expect = 0.50
Identities = 14/31 (45%), Positives = 22/31 (70%)
Frame = +2
Query: 431 HQPITEASYVNIPVIALCNTDSPLRFVDIAI 523
+QPI E + N P+IA C+TDSP++ V + +
Sbjct: 100 YQPIKEVALGNTPIIAFCDTDSPMQCVALLL 130
>UniRef50_Q6Q8T9 Cluster: Predicted 30S ribosomal protein S2; n=1;
uncultured marine gamma proteobacterium EBAC20E09|Rep:
Predicted 30S ribosomal protein S2 - uncultured marine
gamma proteobacterium EBAC20E09
Length = 277
Score = 35.9 bits (79), Expect = 0.66
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
P + V+D + + EA + IP+IAL +T+S +D+ IP N + SI L+
Sbjct: 132 PDAIFVIDVKYEKIAVLEAKKMGIPIIALVDTNSDPDGIDMIIPGNDDAIRSIRLI 187
>UniRef50_A5IY48 Cluster: 30S ribosomal protein S2; n=8;
Mycoplasma|Rep: 30S ribosomal protein S2 - Mycoplasma
agalactiae
Length = 317
Score = 35.9 bits (79), Expect = 0.66
Identities = 20/56 (35%), Positives = 29/56 (51%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
P +IV DP D + EA + VI + +++S VD IP N S+ SI L+
Sbjct: 192 PSFMIVADPNVDAIAVKEARSKGVKVIGILDSNSNPDAVDFGIPANDDSAKSITLI 247
>UniRef50_Q6E782 Cluster: Ribosomal protein S2; n=4; Oomycetes|Rep:
Ribosomal protein S2 - Saprolegnia ferax
Length = 198
Score = 35.9 bits (79), Expect = 0.66
Identities = 22/70 (31%), Positives = 41/70 (58%), Gaps = 4/70 (5%)
Frame = +2
Query: 356 GAFTNQIQAAF---REPRLLIVL-DPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAI 523
G TN+ + F + L+I+L +++ +TE ++ NIP+I L NT+S + +++ I
Sbjct: 116 GLLTNKTVSNFLKHNKINLIILLKSKTKENYLLTEFNHKNIPIITLNNTNSNIDYINYPI 175
Query: 524 PCNTKSSHSI 553
NTK+ S+
Sbjct: 176 FSNTKNLKSL 185
>UniRef50_Q0P3M3 Cluster: Rps2 protein; n=1; Ostreococcus tauri|Rep:
Rps2 protein - Ostreococcus tauri
Length = 226
Score = 35.9 bits (79), Expect = 0.66
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
P L++++ + + E +NIP I L +++ FV IP N S+ S+ +
Sbjct: 164 PDLVVIVGQPNERNAVLECQKLNIPTITLLDSNCDPTFVSYGIPANDDSARSVAFI 219
>UniRef50_P06354 Cluster: Chloroplast 30S ribosomal protein S2; n=2;
Embryophyta|Rep: Chloroplast 30S ribosomal protein S2 -
Marchantia polymorpha (Liverwort)
Length = 235
Score = 35.9 bits (79), Expect = 0.66
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 553
P ++I++D ++ I E + IP I L +TD DI IP N + SI
Sbjct: 162 PDIVIIIDQQKEFTAIQECITLGIPTICLVDTDCDPDMTDIPIPANDDARASI 214
>UniRef50_P56797 Cluster: Chloroplast 30S ribosomal protein S2;
n=252; Streptophyta|Rep: Chloroplast 30S ribosomal
protein S2 - Arabidopsis thaliana (Mouse-ear cress)
Length = 236
Score = 35.9 bits (79), Expect = 0.66
Identities = 17/53 (32%), Positives = 30/53 (56%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 553
P ++I+LD +++ + E + IP I+L +T+ DI+IP N + SI
Sbjct: 162 PDIVIILDQQEEYTALRECITLGIPTISLIDTNCNPDLADISIPANDDAIASI 214
>UniRef50_Q6C1V9 Cluster: Yarrowia lipolytica chromosome F of strain
CLIB122 of Yarrowia lipolytica; n=1; Yarrowia
lipolytica|Rep: Yarrowia lipolytica chromosome F of
strain CLIB122 of Yarrowia lipolytica - Yarrowia
lipolytica (Candida lipolytica)
Length = 427
Score = 35.1 bits (77), Expect = 1.2
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 3/103 (2%)
Frame = +2
Query: 71 SEEDVTKMLAATTHLG--AENVNFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXX 244
+E VT +LAA HLG E + + ++Y R DG +I+L +T +
Sbjct: 171 TEATVTSLLAAGAHLGHAVELGHVNNQPFIYGVR-DGISIIDLEQTVTQLRRAARITEAV 229
Query: 245 EDPADVFVISSRAFGQRAVLK-FAAHTGATPIAGRFTPGAFTN 370
+ + GQ+ L+ + GA+ + ++ PGA TN
Sbjct: 230 AKQNGLILFVGTRDGQKLALEAMSRRCGASYVHSKWIPGAITN 272
>UniRef50_Q1K325 Cluster: Ribosomal protein S2; n=6; Bacteria|Rep:
Ribosomal protein S2 - Desulfuromonas acetoxidans DSM
684
Length = 256
Score = 34.7 bits (76), Expect = 1.5
Identities = 18/62 (29%), Positives = 33/62 (53%)
Frame = +2
Query: 374 IQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSI 553
I+ + P + V+DP ++ + EA + IPV+A+ +T+ +D IP N + +I
Sbjct: 151 IKGMTKLPGAMFVIDPKKEAIAVCEAKKLGIPVVAVVDTNCDPDEIDYIIPGNDDAIRAI 210
Query: 554 GL 559
L
Sbjct: 211 RL 212
>UniRef50_A1AXW9 Cluster: Ribosomal protein S2; n=1; Candidatus
Ruthia magnifica str. Cm (Calyptogena magnifica)|Rep:
Ribosomal protein S2 - Ruthia magnifica subsp.
Calyptogena magnifica
Length = 312
Score = 34.7 bits (76), Expect = 1.5
Identities = 15/54 (27%), Positives = 29/54 (53%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIG 556
P ++ V+D + + EA +++P+I + +T+ +D IP N S +IG
Sbjct: 157 PDVIFVIDIGVEKNAVAEAKKLHLPIIGIVDTNHSPEGIDYVIPGNDDSIRAIG 210
>UniRef50_Q2UN92 Cluster: Mitochondrial/chloroplast ribosomal
protein S2; n=7; Eurotiomycetidae|Rep:
Mitochondrial/chloroplast ribosomal protein S2 -
Aspergillus oryzae
Length = 424
Score = 34.7 bits (76), Expect = 1.5
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 392 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
+P L++ L+P ++ + E N+P I + +TD+ V IP N S +IG++
Sbjct: 244 KPDLVVCLNPLENVVLLHECGLNNVPTIGVIDTDADPTRVTYPIPSNDDSMRAIGVI 300
>UniRef50_P46741 Cluster: Mitochondrial ribosomal protein S2; n=1;
Prototheca wickerhamii|Rep: Mitochondrial ribosomal
protein S2 - Prototheca wickerhamii
Length = 274
Score = 34.7 bits (76), Expect = 1.5
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 389 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKS 541
++P ++ + +P + I EA+ + IPVI + S + IPCN S
Sbjct: 201 KKPDVIFIFNPGDNKNLILEANRLQIPVIGCTDMSSNTNGISYPIPCNNTS 251
>UniRef50_UPI000023ED36 Cluster: hypothetical protein FG06308.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06308.1 - Gibberella zeae PH-1
Length = 645
Score = 33.9 bits (74), Expect = 2.7
Identities = 43/175 (24%), Positives = 71/175 (40%), Gaps = 13/175 (7%)
Frame = +2
Query: 77 EDVTK--MLAATTHLGAENV--NFQMETYVYKRRGDGTHVINLRRTWEKXXXXXXXXXXX 244
ED+T +LA+ TH+G + N Y+Y R G H+I+L T
Sbjct: 126 EDITLELLLASQTHIGHKTSLWNPANSRYIYGVR-QGVHMISLETTAAHLRRAARVVEEV 184
Query: 245 EDPADVFVISSRAFGQRAVLKFAAH-TGATPIAGRFTPGAFTNQIQAAFREPRLLIVLDP 421
A + + GQ ++ AA GA + ++TPG TN R+ L +
Sbjct: 185 AYNAGLILFVGNRKGQMEIVTQAAEMAGACHLFTKWTPGGITN------RDVILKMAGTK 238
Query: 422 AQDHQPITEASYVN--------IPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
DH+ + + N +P + +C +PL + C KS +IG++
Sbjct: 239 VVDHKDVELPGFENYRGSARPLMPDLVVCL--NPLENYTLLYECGLKSIPTIGVI 291
>UniRef50_Q67Q95 Cluster: Putative uncharacterized protein; n=1;
Symbiobacterium thermophilum|Rep: Putative
uncharacterized protein - Symbiobacterium thermophilum
Length = 594
Score = 33.5 bits (73), Expect = 3.5
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +2
Query: 266 VISSRAFGQRAVLKFAAHTGATPIAGRFTPGAFTNQIQAAFRE----PRLLIVLDPAQDH 433
V SR+ Q V++ A GA P+AG A ++++ A R+ PRL+I+ + DH
Sbjct: 182 VEQSRSALQFVVVQEAESQGAAPLAGVAVVQATPDEVEEARRQDLTVPRLIILEEVQADH 241
Query: 434 QPITEASYVNIP 469
+T + ++P
Sbjct: 242 PEVTADAIRDVP 253
>UniRef50_Q1V2V1 Cluster: Probable 30S ribosomal protein S2; n=2;
Candidatus Pelagibacter ubique|Rep: Probable 30S
ribosomal protein S2 - Candidatus Pelagibacter ubique
HTCC1002
Length = 273
Score = 33.5 bits (73), Expect = 3.5
Identities = 17/55 (30%), Positives = 30/55 (54%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 559
P L+ ++D + I EAS + IP+ A+ +++S +D IP N + +I L
Sbjct: 159 PDLVFIIDTNYESLAIAEASKLGIPICAILDSNSNPDGIDYPIPGNDDARRAIDL 213
>UniRef50_Q9W2T1 Cluster: CG9817-PA; n=1; Drosophila melanogaster|Rep:
CG9817-PA - Drosophila melanogaster (Fruit fly)
Length = 2090
Score = 33.5 bits (73), Expect = 3.5
Identities = 19/46 (41%), Positives = 24/46 (52%)
Frame = -1
Query: 359 HQE*NVQQLVLRQCGQQI*AQHAGQMHVMR*QTHQLDPPRRQQHEQ 222
HQ+ + QQL +Q QQ QH Q H + Q QL +QQH Q
Sbjct: 968 HQQQHAQQLQHQQLQQQHAQQHQQQQHHLHQQHQQLHHDPQQQHPQ 1013
>UniRef50_Q0U871 Cluster: Putative uncharacterized protein; n=2;
Pezizomycotina|Rep: Putative uncharacterized protein -
Phaeosphaeria nodorum (Septoria nodorum)
Length = 414
Score = 33.1 bits (72), Expect = 4.7
Identities = 17/67 (25%), Positives = 32/67 (47%)
Frame = +2
Query: 353 PGAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCN 532
PG + P L++ ++P +++ + E + NIP I + +T++ +V IP N
Sbjct: 259 PGFEEQLFNRSVLRPDLVVCMNPLENYVLLHECALNNIPTIGVIDTNADPTWVTYPIPAN 318
Query: 533 TKSSHSI 553
S I
Sbjct: 319 DDSHRCI 325
>UniRef50_A4R5S3 Cluster: Putative uncharacterized protein; n=1;
Magnaporthe grisea|Rep: Putative uncharacterized protein
- Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 398
Score = 33.1 bits (72), Expect = 4.7
Identities = 16/56 (28%), Positives = 31/56 (55%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
P L++VL+P +++ + E IP I + +T++ + V IP N S S+ ++
Sbjct: 271 PDLVVVLNPLENNILLHECKVSQIPTIGVIDTNADVTKVTYPIPANDDSLRSMAVI 326
>UniRef50_P66546 Cluster: 30S ribosomal protein S2; n=32; cellular
organisms|Rep: 30S ribosomal protein S2 - Xylella
fastidiosa
Length = 266
Score = 33.1 bits (72), Expect = 4.7
Identities = 18/57 (31%), Positives = 29/57 (50%)
Frame = +2
Query: 389 REPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 559
R P + V+D + I EA + IPV+A+ +T+ VD IP N + ++ L
Sbjct: 156 RIPDAIFVIDIGHEDIAIKEAKKLGIPVVAVVDTNYDPSLVDYPIPGNDDAIRAVQL 212
>UniRef50_Q3ZIZ5 Cluster: Chloroplast 30S ribosomal protein S2; n=1;
Pseudendoclonium akinetum|Rep: Chloroplast 30S ribosomal
protein S2 - Pseudendoclonium akinetum (Green alga)
Length = 258
Score = 32.7 bits (71), Expect = 6.2
Identities = 17/69 (24%), Positives = 33/69 (47%)
Frame = +2
Query: 356 GAFTNQIQAAFREPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNT 535
G + + I+ P ++I++ +++ + E + I I + +TD D+ IP N
Sbjct: 154 GKYLDGIKNMASIPDIVIIIGQSEEINAVRECKKLGIRTITILDTDCDPSLADLFIPAND 213
Query: 536 KSSHSIGLM 562
S SI L+
Sbjct: 214 DSISSIKLL 222
>UniRef50_UPI0000E4908F Cluster: PREDICTED: similar to Ncoa6
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to Ncoa6 protein - Strongylocentrotus
purpuratus
Length = 2349
Score = 32.3 bits (70), Expect = 8.1
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = -1
Query: 329 LRQCGQQI*AQHAGQMHVMR*QT-HQLDPPRRQQHEQR 219
L+Q Q + QHA Q H ++ Q HQL + QQH+Q+
Sbjct: 498 LQQLQQHLQQQHAQQQHQLQQQVHHQLQQQQHQQHQQQ 535
>UniRef50_UPI00004488FF Cluster: UPI00004488FF related cluster; n=1;
Gallus gallus|Rep: UPI00004488FF UniRef100 entry -
Gallus gallus
Length = 107
Score = 32.3 bits (70), Expect = 8.1
Identities = 16/40 (40%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = -3
Query: 417 SKTINSLGSRNAAWIWLVN-APGVKRPAIGVAPVWAANLS 301
S TI + S ++W+ LV PG + P +G AP W ++LS
Sbjct: 2 SLTIWDVCSAASSWLSLVGFRPGSEAPCVGTAPGWGSSLS 41
>UniRef50_Q02AL1 Cluster: Ribosomal protein S2; n=1; Solibacter
usitatus Ellin6076|Rep: Ribosomal protein S2 -
Solibacter usitatus (strain Ellin6076)
Length = 303
Score = 32.3 bits (70), Expect = 8.1
Identities = 18/55 (32%), Positives = 30/55 (54%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 559
P +L V+D ++ + EA + IPV+A+ +T+ VD IP N + +I L
Sbjct: 159 PDVLFVIDSNKEGIAVKEARRLGIPVVAIVDTNCDPDEVDWVIPGNDDALRAIRL 213
>UniRef50_A7PZX1 Cluster: Chromosome chr15 scaffold_40, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_40, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 130
Score = 32.3 bits (70), Expect = 8.1
Identities = 15/25 (60%), Positives = 17/25 (68%)
Frame = +2
Query: 281 AFGQRAVLKFAAHTGATPIAGRFTP 355
A GQ AVLK +TGA +AGR TP
Sbjct: 101 AAGQGAVLKLVRYTGAHAVAGRHTP 125
>UniRef50_A6R797 Cluster: Putative uncharacterized protein; n=1;
Ajellomyces capsulatus NAm1|Rep: Putative
uncharacterized protein - Ajellomyces capsulatus NAm1
Length = 424
Score = 32.3 bits (70), Expect = 8.1
Identities = 16/57 (28%), Positives = 29/57 (50%)
Frame = +2
Query: 392 EPRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
+P L++ L+P ++ + E IP I + +TD+ V IP N S S+ ++
Sbjct: 317 KPDLVVCLNPLENRPLLHECGLHVIPTIGIIDTDANPTHVTYPIPANDDSLRSVAVI 373
>UniRef50_Q9GCB9 Cluster: Mitochondrial ribosomal protein S2; n=38;
Magnoliophyta|Rep: Mitochondrial ribosomal protein S2 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 219
Score = 32.3 bits (70), Expect = 8.1
Identities = 17/51 (33%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVD-IAIPCNTKSS 544
P ++V D + I EAS + IPV+A+ + + PL F + I P + S
Sbjct: 131 PDCVVVFDSERKSSVILEASKLQIPVVAIVDPNVPLEFFEKITYPVPARDS 181
>UniRef50_Q6N5Q2 Cluster: 30S ribosomal protein S2; n=95;
Bacteria|Rep: 30S ribosomal protein S2 -
Rhodopseudomonas palustris
Length = 331
Score = 32.3 bits (70), Expect = 8.1
Identities = 16/55 (29%), Positives = 29/55 (52%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGL 559
P L+ V+D ++ I EA + IPV A+ +T+ + + +P N + +I L
Sbjct: 160 PDLIFVIDTNKEDIAIQEAQRLGIPVAAIVDTNCDPKGITYLVPGNDDAGRAIAL 214
>UniRef50_Q6YR51 Cluster: 30S ribosomal protein S2; n=2; Candidatus
Phytoplasma asteris|Rep: 30S ribosomal protein S2 -
Onion yellows phytoplasma
Length = 271
Score = 32.3 bits (70), Expect = 8.1
Identities = 15/56 (26%), Positives = 28/56 (50%)
Frame = +2
Query: 395 PRLLIVLDPAQDHQPITEASYVNIPVIALCNTDSPLRFVDIAIPCNTKSSHSIGLM 562
P+ + V+DP ++ + EA + I V + +T+ VD IP N + + L+
Sbjct: 158 PQAIFVVDPEKESIAVAEARKLGIKVFGIVDTNCDPDLVDYIIPANDDAIRGVKLI 213
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,812,779
Number of Sequences: 1657284
Number of extensions: 10405489
Number of successful extensions: 24778
Number of sequences better than 10.0: 110
Number of HSP's better than 10.0 without gapping: 23985
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24708
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 38321472724
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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