Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C24
         (616 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical pr...    34   0.070
Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical pr...    34   0.070
Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical pr...    34   0.070
Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical pr...    34   0.070
AF016686-12|AAB66234.1|  723|Caenorhabditis elegans Hypothetical...    29   2.0  
Z50740-1|CAA90607.1| 1089|Caenorhabditis elegans Hypothetical pr...    28   4.6  
U21310-1|AAA62519.1|  997|Caenorhabditis elegans Hypothetical pr...    28   6.1  
AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical...    28   6.1  

>Z83731-8|CAH10801.1| 1490|Caenorhabditis elegans Hypothetical
           protein F16A11.3a protein.
          Length = 1490

 Score = 34.3 bits (75), Expect = 0.070
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = -1

Query: 529 LWMKRCGSLPRTYPLARLKPATHTSPGSPSRT---HRIFSSRR*T*LFDIGTPI 377
           ++++R G+LP ++P    K ATH+S  SP ++     + SSR+   LFD   PI
Sbjct: 616 IFLRRLGALPPSFP---KKKATHSSSSSPRKSPTRSPLLSSRKKGLLFDFAAPI 666


>Z83731-7|CAH10800.1| 1046|Caenorhabditis elegans Hypothetical
           protein F16A11.3c protein.
          Length = 1046

 Score = 34.3 bits (75), Expect = 0.070
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = -1

Query: 529 LWMKRCGSLPRTYPLARLKPATHTSPGSPSRT---HRIFSSRR*T*LFDIGTPI 377
           ++++R G+LP ++P    K ATH+S  SP ++     + SSR+   LFD   PI
Sbjct: 616 IFLRRLGALPPSFP---KKKATHSSSSSPRKSPTRSPLLSSRKKGLLFDFAAPI 666


>Z81505-4|CAH10794.1| 1490|Caenorhabditis elegans Hypothetical
           protein F16A11.3a protein.
          Length = 1490

 Score = 34.3 bits (75), Expect = 0.070
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = -1

Query: 529 LWMKRCGSLPRTYPLARLKPATHTSPGSPSRT---HRIFSSRR*T*LFDIGTPI 377
           ++++R G+LP ++P    K ATH+S  SP ++     + SSR+   LFD   PI
Sbjct: 616 IFLRRLGALPPSFP---KKKATHSSSSSPRKSPTRSPLLSSRKKGLLFDFAAPI 666


>Z81505-3|CAH10793.1| 1046|Caenorhabditis elegans Hypothetical
           protein F16A11.3c protein.
          Length = 1046

 Score = 34.3 bits (75), Expect = 0.070
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 3/54 (5%)
 Frame = -1

Query: 529 LWMKRCGSLPRTYPLARLKPATHTSPGSPSRT---HRIFSSRR*T*LFDIGTPI 377
           ++++R G+LP ++P    K ATH+S  SP ++     + SSR+   LFD   PI
Sbjct: 616 IFLRRLGALPPSFP---KKKATHSSSSSPRKSPTRSPLLSSRKKGLLFDFAAPI 666


>AF016686-12|AAB66234.1|  723|Caenorhabditis elegans Hypothetical
           protein R07C3.4 protein.
          Length = 723

 Score = 29.5 bits (63), Expect = 2.0
 Identities = 25/81 (30%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
 Frame = +3

Query: 273 GYKLANFYGTTEVMADITYYVLETLGQMHLFLTVPIGVPISNNYVYLLD-ENMRCVREGE 449
           G ++   YG TE     T   ++ +G M       +G PIS   + L+D   +    +  
Sbjct: 468 GIEILELYGLTETSGPTT---IQLVGDM----LGSVGPPISCTSIKLVDIAELGYFVDEN 520

Query: 450 PGEVCVAGFNLARGYVRGKDP 512
            GEV V G N+  GY   KDP
Sbjct: 521 GGEVLVKGHNVTSGYY--KDP 539


>Z50740-1|CAA90607.1| 1089|Caenorhabditis elegans Hypothetical
           protein F31B12.2 protein.
          Length = 1089

 Score = 28.3 bits (60), Expect = 4.6
 Identities = 14/34 (41%), Positives = 22/34 (64%)
 Frame = -1

Query: 178 LNAGSKDRYKRIERSRVGTNTKRRTSCSTKTLTS 77
           L++G+KD   R  R R+GT+T   ++ S KT +S
Sbjct: 551 LSSGAKDIKNRERRKRLGTDTSSGSNRSKKTNSS 584


>U21310-1|AAA62519.1|  997|Caenorhabditis elegans Hypothetical
           protein F40H6.2 protein.
          Length = 997

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -1

Query: 511 GSLPRTYPLARLKPATHTSPGSPS 440
           G LP T P    KP+  TSP +PS
Sbjct: 608 GHLPNTIPEEPTKPSQSTSPSTPS 631


>AL161712-11|CAC70135.1| 2870|Caenorhabditis elegans Hypothetical
            protein Y66D12A.14 protein.
          Length = 2870

 Score = 27.9 bits (59), Expect = 6.1
 Identities = 28/109 (25%), Positives = 46/109 (42%)
 Frame = +3

Query: 183  LKCLKLWVCSGETLSRDLALKFFQYFGDHDGYKLANFYGTTEVMADITYYVLETLGQMHL 362
            +K L  WV  GE L + L            G K+   YG TE  A   + + + + +   
Sbjct: 2363 IKNLAYWVVGGEPLPQSLLDSALAL-----GIKVIQNYGPTETTA---FAIAKHMKKGDA 2414

Query: 363  FLTVPIGVPISNNYVYLLDENMRCVREGEPGEVCVAGFNLARGYVRGKD 509
                 IG+P  N+ +       R V   + GE+ ++G  + RGY+  K+
Sbjct: 2415 --GCQIGLPAVNSKI-------RIVEGEDQGELLISGLGIMRGYLNRKE 2454


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,594,827
Number of Sequences: 27780
Number of extensions: 309723
Number of successful extensions: 892
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1332243108
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)