Samia BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C23
         (290 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_44915| Best HMM Match : VWA (HMM E-Value=0)                         28   1.5  
SB_13163| Best HMM Match : VWA (HMM E-Value=2.3e-32)                   28   1.5  
SB_39378| Best HMM Match : VWA (HMM E-Value=0)                         28   1.5  
SB_43725| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   2.0  
SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034)           27   2.0  
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)              27   2.6  
SB_47038| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.5  
SB_37678| Best HMM Match : No HMM Matches (HMM E-Value=.)              27   3.5  
SB_923| Best HMM Match : Glyco_hydro_88 (HMM E-Value=9.6)              27   3.5  
SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   4.6  
SB_48207| Best HMM Match : Peptidase_C5 (HMM E-Value=0.33)             26   4.6  
SB_30667| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   4.6  
SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)                   26   4.6  
SB_20719| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   4.6  
SB_15138| Best HMM Match : CLN3 (HMM E-Value=4.4e-05)                  26   4.6  
SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1)              26   4.6  
SB_3180| Best HMM Match : No HMM Matches (HMM E-Value=.)               26   4.6  
SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19)               26   6.1  
SB_10768| Best HMM Match : Collagen (HMM E-Value=1.5)                  26   6.1  
SB_36660| Best HMM Match : No HMM Matches (HMM E-Value=.)              26   6.1  
SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25)                   26   6.1  
SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)         25   8.0  
SB_8542| Best HMM Match : PT (HMM E-Value=4)                           25   8.0  
SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016)                 25   8.0  

>SB_44915| Best HMM Match : VWA (HMM E-Value=0)
          Length = 541

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 137 VIANPDPFFSQP-SNGPSGHYEPISTGPAY 223
           VIA PDP  S+P +NG  G   PIS+G  Y
Sbjct: 258 VIAEPDPCLSKPCANG--GTCSPISSGSDY 285


>SB_13163| Best HMM Match : VWA (HMM E-Value=2.3e-32)
          Length = 318

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 137 VIANPDPFFSQP-SNGPSGHYEPISTGPAY 223
           VIA PDP  S+P +NG  G   PIS+G  Y
Sbjct: 54  VIAEPDPCLSKPCANG--GTCSPISSGSDY 81


>SB_39378| Best HMM Match : VWA (HMM E-Value=0)
          Length = 2865

 Score = 27.9 bits (59), Expect = 1.5
 Identities = 16/30 (53%), Positives = 19/30 (63%), Gaps = 1/30 (3%)
 Frame = +2

Query: 137 VIANPDPFFSQP-SNGPSGHYEPISTGPAY 223
           VIA PDP  S+P +NG  G   PIS+G  Y
Sbjct: 409 VIAEPDPCLSKPCANG--GTCSPISSGSDY 436


>SB_43725| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 173

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -3

Query: 129 SLLPSDGTPTIVHHVTLFATAMANTPKKKTRSFHCRIVS 13
           S LP   TP    HVTL A     +   ++R F CR++S
Sbjct: 70  STLPHVNTPV---HVTLLAVTERFSENARSRKFVCRVLS 105


>SB_30225| Best HMM Match : Peptidase_S8 (HMM E-Value=0.0034)
          Length = 605

 Score = 27.5 bits (58), Expect = 2.0
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +2

Query: 197 EPISTGPAYVDFNHPNYPAQGIRSA 271
           EPI T   Y    HP++P++  RSA
Sbjct: 69  EPIGTLEGYYHLEHPSHPSRSRRSA 93


>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
          Length = 406

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 13/44 (29%), Positives = 22/44 (50%)
 Frame = +2

Query: 149 PDPFFSQPSNGPSGHYEPISTGPAYVDFNHPNYPAQGIRSASRP 280
           P P +  PS     +  P  + P+Y    HP+YP+  I+++  P
Sbjct: 297 PHPTYKHPSYSYPTYKHPSYSYPSY---KHPSYPSSHIQASLLP 337



 Score = 26.6 bits (56), Expect = 3.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = +2

Query: 200 PISTGPAYVDFNHPNYPAQGIRSASRP 280
           P    P+Y  + HP+YP+  I+++  P
Sbjct: 202 PTYKHPSYPSYKHPSYPSSHIQASLLP 228


>SB_47038| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 876

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +2

Query: 200 PISTGP-AYVDFNHPNYPAQGIRSASRPWW 286
           P+  G  AY+  N  +   +G R A+ PWW
Sbjct: 829 PLEVGTEAYIAVNEEDLQDKGRRRATDPWW 858


>SB_37678| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 194

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = -3

Query: 156 GSGFAITTWSLLPSDGTPTIVHHV 85
           GSG  I  W++LP   T TI++ +
Sbjct: 87  GSGGVIIVWTILPQLSTKTIIYPI 110


>SB_923| Best HMM Match : Glyco_hydro_88 (HMM E-Value=9.6)
          Length = 269

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 148 VRYNNVVTIAVRWNTHYCPPRDSVCDSH 65
           V  N + T+++    HY P  D++ D H
Sbjct: 3   VSINTLTTLSINTRQHYQPTPDNITDQH 30


>SB_51717| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 799

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 107 VPSDGNSDHVVIANPDPFFSQPSNGPSGHYEPISTGPAYVDF 232
           +P DGN D   I N D     PS+ P  H+  +   P + ++
Sbjct: 33  IPEDGNGDAAYIVNVD-----PSDKPGSHWLAVYFTPDHCEW 69


>SB_48207| Best HMM Match : Peptidase_C5 (HMM E-Value=0.33)
          Length = 184

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 107 VPSDGNSDHVVIANPDPFFSQPSNGPSGHYEPISTGPAYVDF 232
           +P DGN D   I N D     PS+ P  H+  +   P + ++
Sbjct: 33  IPEDGNGDAAYIVNVD-----PSDKPGSHWLAVYFTPDHCEW 69


>SB_30667| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 108

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 107 VPSDGNSDHVVIANPDPFFSQPSNGPSGHYEPISTGPAYVDF 232
           +P DGN D   I N D     PS+ P  H+  +   P + ++
Sbjct: 33  IPEDGNGDAAYIVNVD-----PSDKPGSHWLAVYFTPDHCEW 69


>SB_42815| Best HMM Match : rve (HMM E-Value=0.00022)
          Length = 1514

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 107  VPSDGNSDHVVIANPDPFFSQPSNGPSGHYEPISTGPAYVDF 232
            +P DGN D   I N D     PS+ P  H+  +   P + ++
Sbjct: 1217 IPEDGNGDAAYIVNVD-----PSDKPGSHWLAVYFTPDHCEW 1253


>SB_20719| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 245

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 17/53 (32%), Positives = 22/53 (41%)
 Frame = +2

Query: 107 VPSDGNSDHVVIANPDPFFSQPSNGPSGHYEPISTGPAYVDFNHPNYPAQGIR 265
           +P DGN     IAN D     PSN P  H+  +    A V+     +P    R
Sbjct: 87  IPEDGNGCAAYIANVD-----PSNKPGSHWLAVYFTYANVNGESFRFPPHAYR 134


>SB_15138| Best HMM Match : CLN3 (HMM E-Value=4.4e-05)
          Length = 662

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 10/22 (45%), Positives = 15/22 (68%)
 Frame = +2

Query: 44  FFFGVLAMAVANRVTWWTIVGV 109
           F FG+L +A+A R  WW + G+
Sbjct: 86  FIFGILVVALA-RNMWWKLTGL 106


>SB_10450| Best HMM Match : Peptidase_C5 (HMM E-Value=1.1)
          Length = 245

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 107 VPSDGNSDHVVIANPDPFFSQPSNGPSGHYEPISTGPAYVDF 232
           +P DGN D   I N D     PS+ P  H+  +   P + ++
Sbjct: 33  IPEDGNGDAAYIVNVD-----PSDKPGSHWLAVYFTPDHCEW 69


>SB_3180| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 351

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)
 Frame = +2

Query: 149 PDPFFSQPSNGPSG--HYEPISTGPAYVDFNHPNYPAQGIRSASR 277
           P+P   QP N PSG    + +++ P   +   P  P    + ASR
Sbjct: 277 PNPAIPQPPNPPSGGQPQQVVTSQPLNQEVPQPTKPLPASKEASR 321


>SB_37000| Best HMM Match : Astacin (HMM E-Value=5.5e-19)
          Length = 1341

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -2

Query: 103 HYCPPRDSVCDSHGQYAEEENTKLS 29
           HY PPR     +H  ++ + N  L+
Sbjct: 513 HYMPPRQPYVTTHNHHSHDHNNNLT 537


>SB_10768| Best HMM Match : Collagen (HMM E-Value=1.5)
          Length = 274

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 14/38 (36%), Positives = 18/38 (47%)
 Frame = +1

Query: 67  GCRKQSHVVDNSGCSIGRQ**PRCYSEPGSFLLSTIKR 180
           GC K  + VD SGC+ G     R   E G F  + + R
Sbjct: 178 GCDKDPYKVDASGCNQGYHLGTRELEEMGRFFCAGLLR 215


>SB_36660| Best HMM Match : No HMM Matches (HMM E-Value=.)
          Length = 1021

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -3

Query: 141 ITTWSLLPSDGTPTIVH 91
           ++ W +LP+ GTP + H
Sbjct: 105 LSQWEMLPTQGTPLVFH 121


>SB_31260| Best HMM Match : rve (HMM E-Value=5.2e-25)
          Length = 1962

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 13/42 (30%), Positives = 20/42 (47%)
 Frame = +2

Query: 107  VPSDGNSDHVVIANPDPFFSQPSNGPSGHYEPISTGPAYVDF 232
            +P DGN D   I N D     PS+ P  H+  +   P + ++
Sbjct: 1811 IPEDGNGDAAYIVNLD-----PSDKPGSHWLAVYFTPDHCEW 1847


>SB_15838| Best HMM Match : Peptidase_A17 (HMM E-Value=7.9e-32)
          Length = 1027

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = -3

Query: 93   HHVTLFATAMANTP--KKKTRSFHCRI 19
            H  T++ TAMA+TP      RS+ C I
Sbjct: 992  HRCTIYETAMASTPITPSHYRSYECYI 1018


>SB_8542| Best HMM Match : PT (HMM E-Value=4)
          Length = 650

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 4/43 (9%)
 Frame = +2

Query: 140 IANPDPFFSQPSNGPSGHYEPISTG-PAYVDFNHPN---YPAQ 256
           + NP P +  PS  P   Y P     P Y  F +P    YP++
Sbjct: 88  LGNPQPKY-YPSGNPQPRYYPCGNSQPRYYHFGNPQPRYYPSE 129


>SB_50351| Best HMM Match : I-set (HMM E-Value=0.00016)
          Length = 419

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 13/34 (38%), Positives = 19/34 (55%)
 Frame = -2

Query: 166 REERIRVRYNNVVTIAVRWNTHYCPPRDSVCDSH 65
           REER R  ++ +    VR  +   PPRDS  ++H
Sbjct: 202 REERCRAYHSPLPHGTVRQQSSPPPPRDSQTNNH 235


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,600,538
Number of Sequences: 59808
Number of extensions: 222694
Number of successful extensions: 669
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 617
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 669
length of database: 16,821,457
effective HSP length: 70
effective length of database: 12,634,897
effective search space used: 328507322
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)