Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C23
         (290 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    22   1.8  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    20   5.4  
AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor pr...    20   7.1  
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            20   7.1  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    19   9.4  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    19   9.4  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    19   9.4  

>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 11/44 (25%), Positives = 17/44 (38%)
 Frame = +2

Query: 119 GNSDHVVIANPDPFFSQPSNGPSGHYEPISTGPAYVDFNHPNYP 250
           GN+  + I  P P   +         EP +  P Y+    P +P
Sbjct: 71  GNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHP 114


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.2 bits (40), Expect = 5.4
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = +2

Query: 221 YVDFNHPNYPAQGIRSA 271
           YVD N+  YP    R++
Sbjct: 171 YVDINYVEYPQNSKRNS 187


>AM076717-1|CAJ28210.1|  501|Apis mellifera serotonin receptor
           protein.
          Length = 501

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = -2

Query: 220 RRSSAYGFIMSARTV*WL 167
           + S+  G IMSA  V WL
Sbjct: 369 KASTTLGIIMSAFIVCWL 386


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 19.8 bits (39), Expect = 7.1
 Identities = 5/5 (100%), Positives = 5/5 (100%)
 Frame = +2

Query: 275 RPWWE 289
           RPWWE
Sbjct: 74  RPWWE 78


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = -2

Query: 112 WNTHYC 95
           WNT YC
Sbjct: 143 WNTRYC 148


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 5/6 (83%), Positives = 5/6 (83%)
 Frame = -2

Query: 112 WNTHYC 95
           WNT YC
Sbjct: 196 WNTRYC 201


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 19.4 bits (38), Expect = 9.4
 Identities = 9/32 (28%), Positives = 14/32 (43%)
 Frame = -3

Query: 159 KGSGFAITTWSLLPSDGTPTIVHHVTLFATAM 64
           KG    +  W ++   GTP +     L AT +
Sbjct: 307 KGQMIYMDNWKMMMYLGTPVMPDLNALIATGL 338


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 92,710
Number of Sequences: 438
Number of extensions: 2020
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  5869407
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)