Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_C22
(564 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 58 4e-09
SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 5e-06
SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0) 48 7e-06
SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4) 29 2.6
SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.6
SB_39949| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.1
SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0) 28 6.1
SB_16588| Best HMM Match : Tropomyosin (HMM E-Value=3.3) 28 6.1
SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0) 27 8.0
SB_17981| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.0
SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041) 27 8.0
>SB_48525| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 569
Score = 58.4 bits (135), Expect = 4e-09
Identities = 37/114 (32%), Positives = 57/114 (50%)
Frame = +3
Query: 78 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 257
++V I ++D++N+ A+D P+ +TA + P + A YWI GA
Sbjct: 308 YEVDKIGQILDLINLMAYDL-RGMWEPETGHHTA-LEGPPGEE--LTVSFAAQYWIDKGA 363
Query: 258 PTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEIC 419
P K+ LG+ T GR +KL +D G+ A+ G YT+ G L+Y EIC
Sbjct: 364 PASKIALGLGTYGRAFKL-ADQTRHGL-KAPANGNPTRGQYTREPGFLAYYEIC 415
>SB_38742| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 438
Score = 54.8 bits (126), Expect = 5e-08
Identities = 30/72 (41%), Positives = 43/72 (59%)
Frame = +3
Query: 204 DPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYT 383
DPL A++ WI G P++K+ LGI GR++ L + ++ P A KGG+ GPYT
Sbjct: 234 DPL-TVTHAVDLWIAGGMPSNKIALGIPLYGRSFTLKTANKTLDAP---ATKGGQ-GPYT 288
Query: 384 KVQGLLSYPEIC 419
K G ++Y EIC
Sbjct: 289 KEAGYIAYFEIC 300
>SB_28916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 807
Score = 48.0 bits (109), Expect = 5e-06
Identities = 31/127 (24%), Positives = 60/127 (47%), Gaps = 1/127 (0%)
Frame = +3
Query: 3 KQALNVKPNMQLVISVLPNVNS-SIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTA 179
K A KP M L +V + ++V + ++D +N+ +D + P P +TA
Sbjct: 551 KAADTDKPRMLLTAAVSAGHGTVDAAYEVHKLAGILDWINLMTYDLHGPWE-PYTGHHTA 609
Query: 180 PIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADK 359
+ P ++ A+ YW++ G P K+ LG++ G ++L ++ + P + +K
Sbjct: 610 LVGPPGDK---LTVSYAVKYWMEKGMPCGKIALGMANYGHAFELSDPTKTALGAPANVNK 666
Query: 360 GGEAGPY 380
G + PY
Sbjct: 667 -GRSYPY 672
>SB_25657| Best HMM Match : Glyco_hydro_18 (HMM E-Value=0)
Length = 829
Score = 47.6 bits (108), Expect = 7e-06
Identities = 45/147 (30%), Positives = 66/147 (44%), Gaps = 13/147 (8%)
Frame = +3
Query: 78 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYW----- 242
+D+ I +D +N+ +D + PK +TA P D L AI YW
Sbjct: 584 YDIEGISKPLDWINVMTYDLHGTWE-PKTGHHTA--MGPDG-DKL-TLPFAIWYWMNNRD 638
Query: 243 ------IQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLS 404
I+NG P +K+VLG+ T GR + L+S + G +AG YT +G L+
Sbjct: 639 TWEKPGIRNGMPANKIVLGLGTYGRAFGLES----------AGNNGLDAGKYTGAKGFLA 688
Query: 405 YPEIC--AKLINPNQNGKRPHLRKVND 479
Y EIC + N K P+ K +D
Sbjct: 689 YFEICKMGLTVVENNKAKAPYGYKGHD 715
>SB_22158| Best HMM Match : Lipoprotein_15 (HMM E-Value=8.4)
Length = 184
Score = 29.1 bits (62), Expect = 2.6
Identities = 20/63 (31%), Positives = 29/63 (46%)
Frame = +3
Query: 372 GPYTKVQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYAFRLPDDYGEGGFWVS 551
GPYT+ G LSY EIC + P + +V P Y + + D+ + WV
Sbjct: 16 GPYTRESGFLSYYEICDMM--PKMKTMKTDQSEVRAP------YGY-VKQDWAD--VWVG 64
Query: 552 YED 560
Y+D
Sbjct: 65 YDD 67
>SB_8858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 886
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/45 (26%), Positives = 21/45 (46%)
Frame = +1
Query: 337 FHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 471
F RY P+R KL++ ++ TQ P + +++F R
Sbjct: 523 FTRYNPVRYAKLIVFTRYNPVRYTQLMVFTRYNPVRYAQLMVFTR 567
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/57 (21%), Positives = 26/57 (45%)
Frame = +1
Query: 301 RGSSIQTVKFPEFHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 471
R + ++ + F RY P+R +L++ ++ TQ P + +++F R
Sbjct: 180 RYNPVRYTQLMVFTRYNPVRYTQLIVFTRYNPVRYTQLIVFTRYNPVRYTQLIVFTR 236
Score = 27.5 bits (58), Expect = 8.0
Identities = 12/57 (21%), Positives = 27/57 (47%)
Frame = +1
Query: 301 RGSSIQTVKFPEFHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 471
R + ++ + F RY P+R ++L++ ++ TQ P + +++F R
Sbjct: 152 RYNPVRYAQLMVFTRYNPVRYLQLLVFTRYNPVRYTQLMVFTRYNPVRYTQLIVFTR 208
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/45 (24%), Positives = 21/45 (46%)
Frame = +1
Query: 337 FHRYTPIRVVKLVLIPKFKVY*ATQKFAPNLLTPTKTESVLIFVR 471
F RY P+R +L++ ++ TQ P + +++F R
Sbjct: 206 FTRYNPVRYTQLIVFTRYNPVRYTQLIVFTRYNPVRYAQLMVFTR 250
>SB_39949| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 66
Score = 27.9 bits (59), Expect = 6.1
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = -2
Query: 494 KTFARIVDLTKMRTLSVLVGVNKFGANFWVA 402
K FAR++ T +R + VL+ + FG + W A
Sbjct: 17 KQFARLLIKTPVRIVVVLLSLGLFGVSIWEA 47
>SB_13477| Best HMM Match : Ldl_recept_a (HMM E-Value=0)
Length = 628
Score = 27.9 bits (59), Expect = 6.1
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = +2
Query: 242 DSKWCAYPQTCPWYQHHWTYVEA 310
D + C+YP T PW WT + +
Sbjct: 80 DERNCSYPTTGPWTTRPWTPISS 102
>SB_16588| Best HMM Match : Tropomyosin (HMM E-Value=3.3)
Length = 430
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 185 LRTAEPRSSTKRRRCYKLLD-SKWCAYPQTCPWYQHHWTYVEAR 313
LR + PRS ++ + K+ ++P P +HHWT E R
Sbjct: 26 LRNSTPRSKARKPLQFTSPSHGKFKSFPVKSPVRRHHWTLEEER 69
>SB_46720| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1705
Score = 27.5 bits (58), Expect = 8.0
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 1/71 (1%)
Frame = +3
Query: 330 SGVPPIHADKGGEAGPYTK-VQGLLSYPEICAKLINPNQNGKRPHLRKVNDPSKRFGTYA 506
SG+ + G P + G+ YP + + +P Q G P V D ++ +
Sbjct: 326 SGIEGLKGQSGPLGDPGDNGIDGISGYPGVPGRKGDPGQKGDPPRFVPVPDHGEKGQSGE 385
Query: 507 FRLPDDYGEGG 539
P + GE G
Sbjct: 386 PGFPGEIGEAG 396
>SB_43930| Best HMM Match : ANF_receptor (HMM E-Value=0)
Length = 915
Score = 27.5 bits (58), Expect = 8.0
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +3
Query: 288 TTGRTWKLDSDSEISGVPPIHADKGGEAGPYT-KVQGLLSYPEI 416
T G+TW E G+P + A GG A P + + +LS +I
Sbjct: 119 TAGKTWNASCFCEGRGMPLVGAVIGGAASPISLNIANVLSVNDI 162
>SB_17981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1303
Score = 27.5 bits (58), Expect = 8.0
Identities = 28/117 (23%), Positives = 51/117 (43%), Gaps = 9/117 (7%)
Frame = +3
Query: 78 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 257
+D+ +I+++VD + I A+D + KE P A N P + +++
Sbjct: 171 YDLKAIVDIVDFMVIMAYD---QQSQIKE----GPCIAKAN-SPYSQTLEGVQQYLKLNI 222
Query: 258 PTHKLVLGISTTGRTW---KLDSDSEISGVPPIH------ADKGGEAGPYTKVQGLL 401
+KLVLG+ G + ++D ++I + + +D G PY V LL
Sbjct: 223 SNNKLVLGLPWYGYDYPCEEIDEKNDICFIKKVPFRGVNCSDAAGTQIPYATVNDLL 279
>SB_19371| Best HMM Match : C_tripleX (HMM E-Value=0.041)
Length = 942
Score = 27.5 bits (58), Expect = 8.0
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +2
Query: 215 KRRRCYKLLDSKWCAYPQTCP 277
K RCY L DSK C P P
Sbjct: 327 KAPRCYNLCDSKTCIIPTKAP 347
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,454,263
Number of Sequences: 59808
Number of extensions: 415989
Number of successful extensions: 1341
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1325051197
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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