Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_C22
(564 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 25 0.40
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 24 0.92
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.1
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 2.8
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 21 6.5
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 21 6.5
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 21 8.6
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 21 8.6
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 8.6
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 21 8.6
AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cycl... 21 8.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 21 8.6
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 25.4 bits (53), Expect = 0.40
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 135 YYTPERNPKEADYTAPIYAPQN 200
Y+ E++PK+ T P APQN
Sbjct: 302 YFRAEKDPKKMPCTQPPSAPQN 323
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 24.2 bits (50), Expect = 0.92
Identities = 13/38 (34%), Positives = 23/38 (60%), Gaps = 2/38 (5%)
Frame = +3
Query: 231 INYWIQNGAPTHKLVLGIST--TGRTWKLDSDSEISGV 338
+++WI A + ++ LGI+T T T LDS +++ V
Sbjct: 264 VSFWIHREATSDRVGLGITTVLTLSTISLDSRTDLPKV 301
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.0 bits (47), Expect = 2.1
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -2
Query: 548 NPEATFTIIIRKAEGIGPKTFARIVDLTKMRTLSV 444
+P T TII + GP T R+ DL + TL V
Sbjct: 962 DPSDTVTIITAEEAPSGPPTSIRVDDLDQ-HTLKV 995
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 22.6 bits (46), Expect = 2.8
Identities = 7/20 (35%), Positives = 15/20 (75%)
Frame = +3
Query: 231 INYWIQNGAPTHKLVLGIST 290
+++WI + A + ++ LGI+T
Sbjct: 261 VSFWINHEATSARVALGITT 280
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 495 GTYAFRLPDDYGEGGF 542
G Y F+L D Y GF
Sbjct: 438 GMYVFQLLDSYAVSGF 453
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 21.4 bits (43), Expect = 6.5
Identities = 8/16 (50%), Positives = 9/16 (56%)
Frame = +3
Query: 495 GTYAFRLPDDYGEGGF 542
G Y F+L D Y GF
Sbjct: 491 GMYVFQLLDSYAVSGF 506
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 8.6
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +3
Query: 231 INYWIQNGAPTHKLVLGIST 290
+++W+ A ++ LG++T
Sbjct: 240 VSFWLNRNATPARVALGVTT 259
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 21.0 bits (42), Expect = 8.6
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +3
Query: 231 INYWIQNGAPTHKLVLGIST 290
+++W+ A ++ LG++T
Sbjct: 240 VSFWLNRNATPARVALGVTT 259
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +1
Query: 28 ICS*LSAFCQT*IAPFTLTS 87
IC+ L+A CQ + F +TS
Sbjct: 644 ICTKLTADCQPGVTAFIVTS 663
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 21.0 bits (42), Expect = 8.6
Identities = 5/20 (25%), Positives = 13/20 (65%)
Frame = +3
Query: 231 INYWIQNGAPTHKLVLGIST 290
+++W+ A ++ LG++T
Sbjct: 179 VSFWLNRNATPARVALGVTT 198
>AB204559-1|BAD89804.1| 832|Apis mellifera soluble guanylyl cyclase
beta-3 protein.
Length = 832
Score = 21.0 bits (42), Expect = 8.6
Identities = 9/29 (31%), Positives = 14/29 (48%)
Frame = -1
Query: 225 RRRFVEDRGSAVRKSVQCSPPLWGYVQVY 139
R+ + EDR +R+ P + QVY
Sbjct: 14 RQVYGEDRWEEIRRQASVEQPSFSVHQVY 42
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 21.0 bits (42), Expect = 8.6
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = +3
Query: 309 LDSDSEISGVPPIHADKGGEAGPYTKVQGL 398
+ D + G+ P+H G GP +G+
Sbjct: 53 IPGDIVLGGLFPVHEKGGASCGPNVYNRGV 82
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 164,620
Number of Sequences: 438
Number of extensions: 3527
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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