Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_C22
(564 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein si... 56 1e-08
At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein si... 56 2e-08
At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein si... 50 1e-06
At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein si... 49 2e-06
At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein si... 47 1e-05
At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein si... 46 1e-05
At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein si... 45 4e-05
At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein si... 44 9e-05
At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein si... 43 1e-04
At3g16460.2 68416.m02097 jacalin lectin family protein contains ... 31 0.70
At3g16460.1 68416.m02098 jacalin lectin family protein contains ... 31 0.70
At1g30220.1 68414.m03697 sugar transporter family protein simila... 29 1.6
At5g42390.1 68418.m05161 metalloendopeptidase identical to chlor... 29 2.8
At4g34350.1 68417.m04881 LytB family protein contains Pfam profi... 28 3.7
At5g57000.1 68418.m07114 expressed protein similar to unknown pr... 28 5.0
At2g46530.2 68415.m05803 transcriptional factor B3 family protei... 27 6.5
At2g46530.1 68415.m05802 transcriptional factor B3 family protei... 27 6.5
At1g50790.1 68414.m05712 hypothetical protein 27 6.5
At5g65630.1 68418.m08256 DNA-binding bromodomain-containing prot... 27 8.7
At2g36730.1 68415.m04506 pentatricopeptide (PPR) repeat-containi... 27 8.7
At2g33570.1 68415.m04114 expressed protein 27 8.7
>At4g19730.1 68417.m02897 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 332
Score = 56.4 bits (130), Expect = 1e-08
Identities = 32/103 (31%), Positives = 52/103 (50%), Gaps = 1/103 (0%)
Frame = +3
Query: 21 KPNMQLVISVL-PNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQ 197
KP + L +V +V + + V + +D VNI A+D+Y P + K TA ++
Sbjct: 162 KPTLLLTAAVYYSSVYKTFTYPVQVMRESLDWVNIIAYDFYGPVSSSKFTVPTAGLHVSS 221
Query: 198 NRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 326
N + + D+ + WI++G P K VLG S G W L +D +
Sbjct: 222 NNEG-PSGDSGLKQWIKDGLPEKKAVLGFSYVGWAWTLQNDKD 263
>At4g19810.1 68417.m02905 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 379
Score = 56.0 bits (129), Expect = 2e-08
Identities = 34/109 (31%), Positives = 54/109 (49%), Gaps = 1/109 (0%)
Frame = +3
Query: 21 KPNMQLVISVLPNVNS-SIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQ 197
KP + L +V + N S+ + V ++ + +D VN+ A+D+Y P + + A ++ P
Sbjct: 171 KPRLLLAAAVFYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWS-RVTGPPAALFDPS 229
Query: 198 NRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPP 344
N P + DA WIQ G P K VLG G W+L + + S P
Sbjct: 230 NAGP--SGDAGTRSWIQAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAP 276
>At4g19750.1 68417.m02899 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 362
Score = 50.0 bits (114), Expect = 1e-06
Identities = 28/86 (32%), Positives = 47/86 (54%)
Frame = +3
Query: 78 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 257
+ V +I + +D VNI A+D+Y P +P A ++ P N ++ D+ ++ W++
Sbjct: 179 YPVQAIADNLDFVNIMAYDFYGPGWSPVTGP-PAALFDPSNPAG-RSGDSGLSKWLEAKL 236
Query: 258 PTHKLVLGISTTGRTWKLDSDSEISG 335
P K VLG S G W L+ D+E +G
Sbjct: 237 PAKKAVLGFSYCGWAWTLE-DAENNG 261
>At4g19820.1 68417.m02906 glycosyl hydrolase family 18 protein
similar to chitinase/lysozyme GI:467689 from [Nicotiana
tabacum]
Length = 366
Score = 49.2 bits (112), Expect = 2e-06
Identities = 37/133 (27%), Positives = 60/133 (45%), Gaps = 1/133 (0%)
Frame = +3
Query: 21 KPNMQLVISVLPNVNS-SIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQ 197
KP + L +V + + S+ V ++ + +D VN+ A+D+Y + + AP+Y P
Sbjct: 169 KPRLLLTAAVFYSYSYYSVLHPVNAVADSLDWVNLVAYDFYE-SGSSRVTCSPAPLYDPI 227
Query: 198 NRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGP 377
P + DA + W Q G P K VLG G W L +D++ H +GP
Sbjct: 228 TTGP--SGDAGVRAWTQAGLPAKKAVLGFPLYGYAWCL-TDAK------NHNYYANSSGP 278
Query: 378 YTKVQGLLSYPEI 416
G + Y +I
Sbjct: 279 AISPDGSIGYDQI 291
>At4g19740.1 68417.m02898 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 289
Score = 46.8 bits (106), Expect = 1e-05
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +3
Query: 6 QALNVKPNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYY--TPERNPKEADYTA 179
Q ++P + + +S+ + V +I +D VN+ A+++Y T E P A
Sbjct: 137 QRTGIRPLLLTAAVYYTSDYNSVSYPVQAINRSLDWVNLIAYEFYGLTTEIGPP-----A 191
Query: 180 PIYAPQNRDPLQNADAAINYWIQNGAPTHKLVLGISTTGRTWKLDSDSE 326
+Y P + P D + +W++ G P K V G G +W LD D +
Sbjct: 192 GLYDPSIKGPC--GDTGLKHWLKAGLPEKKAVFGFPYVGWSWTLDDDKD 238
>At4g19770.1 68417.m02901 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 261
Score = 46.4 bits (105), Expect = 1e-05
Identities = 36/120 (30%), Positives = 49/120 (40%)
Frame = +3
Query: 57 NVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAIN 236
N N +Y V I L+D VNI+A+D+Y P + T P A + + D+ +
Sbjct: 77 NYNGVVY-PVKFISELLDWVNIKAYDFY----GPGCTEVTGPPAALYLQSDGPSGDSGVK 131
Query: 237 YWIQNGAPTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEI 416
WI G P K VLG G W L P H GP G +SY ++
Sbjct: 132 DWIDAGLPAEKAVLGFPYYGWAWTLAD-------PKNHGYYVDTTGPAISDDGEISYSQL 184
>At4g19800.1 68417.m02904 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 398
Score = 44.8 bits (101), Expect = 4e-05
Identities = 30/113 (26%), Positives = 52/113 (46%)
Frame = +3
Query: 78 FDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQNGA 257
+ V +I N +D +N+ A+D+Y P + A +Y P + ++ D+ + W + G
Sbjct: 170 YPVLAISNSLDWINLMAYDFYGPGWSTVTGP-PASLYLPTDG---RSGDSGVRDWTEAGL 225
Query: 258 PTHKLVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEI 416
P K VLG G W L +D +++G GP G +SY ++
Sbjct: 226 PAKKAVLGFPYYGWAWTL-ADPDVNGY------DANTTGPAISDDGEISYRQL 271
>At4g19760.1 68417.m02900 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:505267 from [Nicotiana
tabacum]
Length = 365
Score = 43.6 bits (98), Expect = 9e-05
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = +3
Query: 72 IYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNRDPLQNADAAINYWIQN 251
+ + V +I + +D VNI A+D+Y P +P A + P N ++ ++ + W+
Sbjct: 185 VEYPVKAIADNLDFVNIMAYDFYGPGWSPVTGPPAALFHDPSN-PAGRSGNSGLRKWLDE 243
Query: 252 G-APTHKLVLGISTTGRTWKLDSDSEISG 335
P K VLG G W L+ D+E +G
Sbjct: 244 AKLPPKKAVLGFPYCGWAWTLE-DAENNG 271
>At4g19720.1 68417.m02896 glycosyl hydrolase family 18 protein
similar to chitinase, class V GI:899342 from [Nicotiana
tabacum]
Length = 363
Score = 43.2 bits (97), Expect = 1e-04
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 1/90 (1%)
Frame = +3
Query: 60 VNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQN-RDPLQNADAAIN 236
V S+ + + I +D VN+ A+D+Y+ A ++ P N + P D +
Sbjct: 174 VYDSVSYPIREIKKKLDWVNLIAYDFYSSSTT---IGPPAALFDPSNPKGPC--GDYGLK 228
Query: 237 YWIQNGAPTHKLVLGISTTGRTWKLDSDSE 326
WI+ G P K VLG G TW L S ++
Sbjct: 229 EWIKAGLPAKKAVLGFPYVGWTWSLGSGND 258
>At3g16460.2 68416.m02097 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 647
Score = 30.7 bits (66), Expect = 0.70
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 252 GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEICAKL 428
G+ KL G ST G +W D S+ GV I+A GGE Y K + L
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVKFDYVKGGVTKQGVL 306
Query: 429 INPNQNGKRPHLRKVNDPSK 488
Q+ + P +N P +
Sbjct: 307 HGKQQSRQNPREFVINHPDE 326
>At3g16460.1 68416.m02098 jacalin lectin family protein contains
Pfam profile: PF01419 jacalin-like lectin domain;
similar to myrosinase binding protein [Brassica napus]
GI:1711296, GI:1655824, myrosinase-binding protein
homolog [Arabidopsis thaliana] GI:2997767; contains Pfam
profile PF01419 jacalin-like lectin family
Length = 705
Score = 30.7 bits (66), Expect = 0.70
Identities = 24/80 (30%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Frame = +3
Query: 252 GAPTHKL-VLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEICAKL 428
G+ KL G ST G +W D S+ GV I+A GGE Y K + L
Sbjct: 249 GSGAQKLEAQGNSTGGTSW--DDGSDYDGVTKIYASYGGEGIQYVKFDYVKGGVTKQGVL 306
Query: 429 INPNQNGKRPHLRKVNDPSK 488
Q+ + P +N P +
Sbjct: 307 HGKQQSRQNPREFVINHPDE 326
>At1g30220.1 68414.m03697 sugar transporter family protein similar
to SP|Q96QE2 Proton myo-inositol co-transporter (Hmit)
[Homo sapiens]; contains Pfam profile PF00083: major
facilitator superfamily protein
Length = 580
Score = 29.5 bits (63), Expect = 1.6
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +1
Query: 205 ILYKTPTLL*ITGFKMVRLPTNLSLVSAPLDVRGSSI 315
++Y +PT++ + GF R LSLV+A L+ GS I
Sbjct: 294 VMYYSPTIVQLAGFASNRTALLLSLVTAGLNAFGSII 330
>At5g42390.1 68418.m05161 metalloendopeptidase identical to
chloroplast processing enzyme metalloendopeptidase
[Arabidopsis thaliana] gi|2827039|gb|AAC39482
Length = 1265
Score = 28.7 bits (61), Expect = 2.8
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = -2
Query: 134 VKCLDVDNVDQVYDAWDVKVNGAIYVWQNADN*LHIGFYIECLF 3
+K DVD + + ++ W N +Y+ + DN I IE +F
Sbjct: 358 IKKWDVDKIRKFHERWYFPANATLYIVGDIDNIPRIVHNIEAVF 401
>At4g34350.1 68417.m04881 LytB family protein contains Pfam profile:
PF02401 LytB protein
Length = 466
Score = 28.3 bits (60), Expect = 3.7
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +3
Query: 270 LVLGISTTGRTWKLDSDSEISGVPPIHADKGGEAGPYTKVQGLLSYPEICAK 425
LV+G + T L SE G+P D GP K+ L Y E+ K
Sbjct: 372 LVVGGWNSSNTSHLQEISEARGIPSYWIDSEKRIGPGNKIAYKLHYGELVEK 423
>At5g57000.1 68418.m07114 expressed protein similar to unknown
protein (gb|AAF21159.1)
Length = 187
Score = 27.9 bits (59), Expect = 5.0
Identities = 9/15 (60%), Positives = 13/15 (86%)
Frame = -1
Query: 558 LRKKPRSHLHHNHQE 514
L++KP HLHH+H+E
Sbjct: 87 LKEKPPRHLHHHHKE 101
>At2g46530.2 68415.m05803 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 514
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 409 QKFAPNLLTPTKTESVLIFVRSTILANVLG-PMPSAFL 519
+ F+P+ LTPT T+ RS ++ + G P+ S+FL
Sbjct: 263 EPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFL 300
>At2g46530.1 68415.m05802 transcriptional factor B3 family protein /
auxin-responsive factor AUX/IAA-related contains Pfam
profiles: PF02309 AUX/IAA family, PF02362 B3 DNA binding
domain
Length = 601
Score = 27.5 bits (58), Expect = 6.5
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +1
Query: 409 QKFAPNLLTPTKTESVLIFVRSTILANVLG-PMPSAFL 519
+ F+P+ LTPT T+ RS ++ + G P+ S+FL
Sbjct: 350 EPFSPSALTPTPTQQQSKSKRSRPISEITGSPVASSFL 387
>At1g50790.1 68414.m05712 hypothetical protein
Length = 812
Score = 27.5 bits (58), Expect = 6.5
Identities = 15/73 (20%), Positives = 32/73 (43%)
Frame = +3
Query: 24 PNMQLVISVLPNVNSSIYFDVPSIINLVDIVNIQAFDYYTPERNPKEADYTAPIYAPQNR 203
P ++++PN + + I + +V I + ++Y P R + ++ P NR
Sbjct: 339 PEKATWVTLVPNRDDE-FISFARCIMVSQLVGIDSLEHYYPNRVASQFGRLQDVHCPVNR 397
Query: 204 DPLQNADAAINYW 242
+ L A +Y+
Sbjct: 398 NNLSREAAWNDYY 410
>At5g65630.1 68418.m08256 DNA-binding bromodomain-containing protein
similar to 5.9 kb fsh membrane protein [Drosophila
melanogaster] GI:157455; contains Pfam profile PF00439:
Bromodomain
Length = 590
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = +3
Query: 432 NPNQNGKRPHLRKVNDPSKRFGTYA 506
NPN N +R + K D S FG+YA
Sbjct: 44 NPNPNFERSNSSKQCDDSSEFGSYA 68
>At2g36730.1 68415.m04506 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 501
Score = 27.1 bits (57), Expect = 8.7
Identities = 12/35 (34%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Frame = -2
Query: 509 EGIGPKTFARIVDLTKMRTLSVLVGVNKFG-ANFW 408
EGIG K R+++L R+ ++++ N+F A W
Sbjct: 401 EGIGEKVKKRLIELEPKRSGNLVIVANRFAEARMW 435
>At2g33570.1 68415.m04114 expressed protein
Length = 496
Score = 27.1 bits (57), Expect = 8.7
Identities = 10/33 (30%), Positives = 18/33 (54%)
Frame = -1
Query: 216 FVEDRGSAVRKSVQCSPPLWGYVQVYNSQMPGC 118
++ + G+++R Q P WGY +VY + C
Sbjct: 147 WISNNGTSIRAKAQKILPDWGYGRVYTVVVVNC 179
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,001,745
Number of Sequences: 28952
Number of extensions: 289371
Number of successful extensions: 874
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 865
length of database: 12,070,560
effective HSP length: 77
effective length of database: 9,841,256
effective search space used: 1082538160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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