Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_C19
(668 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax pr... 25 0.42
EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetyla... 25 0.74
DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulati... 23 1.7
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr... 23 2.3
EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxyla... 23 3.0
AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein. 23 3.0
AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor ... 23 3.0
U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic pr... 22 4.0
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 22 5.2
AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory recept... 22 5.2
AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory recept... 22 5.2
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 21 6.9
AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle nu... 21 6.9
AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein p... 21 6.9
AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein p... 21 6.9
AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein. 21 9.1
>AY074761-1|AAL71874.1| 314|Tribolium castaneum ultrabithorax
protein.
Length = 314
Score = 25.4 bits (53), Expect = 0.42
Identities = 14/61 (22%), Positives = 25/61 (40%)
Frame = +3
Query: 411 IQPCICTREIKQVCGSDGVTYGNPCLLNCATQSNPSLSIEHPGPCDNRVKVVENQPESNK 590
++P CT + + GS G+ G+P A S+ PC + +QP +
Sbjct: 139 VRPAACTPDSRVGYGSVGLVGGDPASSPGAAAGRTGNSLSWNNPCS--INSTSSQPVGTQ 196
Query: 591 V 593
+
Sbjct: 197 I 197
>EU019712-1|ABU25224.1| 535|Tribolium castaneum chitin deacetylase
2A protein.
Length = 535
Score = 24.6 bits (51), Expect = 0.74
Identities = 10/38 (26%), Positives = 18/38 (47%)
Frame = +3
Query: 543 CDNRVKVVENQPESNKVIVVDNNNAPSCACTRNLEPVC 656
C+ + + E++ + D N AP C T+ + P C
Sbjct: 135 CNGKPDCKDESDENSCTVETDPNRAPDCDPTQCVLPDC 172
>DQ490059-1|ABF22614.1| 947|Tribolium castaneum short gastrulation
protein.
Length = 947
Score = 23.4 bits (48), Expect = 1.7
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -3
Query: 531 VRCSSSGSTVWRNSTGTG 478
VRC +GST R +TG G
Sbjct: 918 VRCVCAGSTGTRRATGCG 935
>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
protein protein.
Length = 1156
Score = 23.0 bits (47), Expect = 2.3
Identities = 13/49 (26%), Positives = 22/49 (44%)
Frame = +3
Query: 495 CATQSNPSLSIEHPGPCDNRVKVVENQPESNKVIVVDNNNAPSCACTRN 641
C + + SL ++H C + NQ K ++ NN P + TR+
Sbjct: 640 CGNKIDTSLFVDHIRQCVGGGTIGSNQRNFLKNALMSNNILPPESPTRD 688
>EU019710-1|ABU25222.1| 475|Tribolium castaneum dopa decarboxylase
protein.
Length = 475
Score = 22.6 bits (46), Expect = 3.0
Identities = 11/34 (32%), Positives = 13/34 (38%)
Frame = -2
Query: 478 LP*VTPSLPQTCLISRVQIHGCISATLTSWHSPR 377
+P P P I I +T WHSPR
Sbjct: 42 IPATAPQKPDKWEDVMADIERVIMPGVTHWHSPR 75
>AY321476-1|AAQ23386.1| 253|Tribolium castaneum Ash protein.
Length = 253
Score = 22.6 bits (46), Expect = 3.0
Identities = 9/19 (47%), Positives = 12/19 (63%)
Frame = +3
Query: 312 TYPNKCSLECSRPLAPSLE 368
T P K ++ RPLAP+ E
Sbjct: 37 TQPTKTVIQSKRPLAPAPE 55
>AJ005083-1|CAB65469.1| 585|Tribolium castaneum signal receptor
protein protein.
Length = 585
Score = 22.6 bits (46), Expect = 3.0
Identities = 8/30 (26%), Positives = 14/30 (46%)
Frame = +3
Query: 543 CDNRVKVVENQPESNKVIVVDNNNAPSCAC 632
C NR+ + ++ P N D+ +C C
Sbjct: 58 CQNRINLCDSSPCLNGATCQDHTTHYTCHC 87
Score = 21.0 bits (42), Expect = 9.1
Identities = 9/30 (30%), Positives = 10/30 (33%)
Frame = +3
Query: 543 CDNRVKVVENQPESNKVIVVDNNNAPSCAC 632
C V P N+ V N N C C
Sbjct: 96 CGEYVDWCSTNPCENQATCVQNKNQYQCLC 125
>U63132-1|AAB38392.1| 372|Tribolium castaneum decapentaplegic
protein protein.
Length = 372
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -3
Query: 666 RLRHRLAPSFWYTHKTVHCCY 604
RLR AP WY H+ + Y
Sbjct: 216 RLRRDTAPPQWYQHQPLLFTY 236
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.2
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 170 LPQPVPLVLREGQDAQR 220
LP+P PLV ++G + +R
Sbjct: 236 LPKPTPLVPQQGFNMER 252
>AM292360-1|CAL23172.2| 427|Tribolium castaneum gustatory receptor
candidate 39 protein.
Length = 427
Score = 21.8 bits (44), Expect = 5.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 110 QRCCGVYLRSGDQKYT*YIHFMLLFMAQNP 21
+R V L + DQK +H L+ + +NP
Sbjct: 346 ERLLNVNLSAVDQKTRQEVHMFLMAIEKNP 375
>AM292331-1|CAL23143.2| 437|Tribolium castaneum gustatory receptor
candidate 10 protein.
Length = 437
Score = 21.8 bits (44), Expect = 5.2
Identities = 10/30 (33%), Positives = 16/30 (53%)
Frame = -1
Query: 110 QRCCGVYLRSGDQKYT*YIHFMLLFMAQNP 21
+R V L + DQK +H L+ + +NP
Sbjct: 346 ERLLNVNLSAVDQKTRQEVHMFLMAIEKNP 375
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 21.4 bits (43), Expect = 6.9
Identities = 9/31 (29%), Positives = 13/31 (41%)
Frame = +3
Query: 435 EIKQVCGSDGVTYGNPCLLNCATQSNPSLSI 527
+I+ + V GN L C NP+ I
Sbjct: 415 QIRHAFNEETVQPGNSVFLKCIASGNPTPEI 445
>AM295014-1|CAL25729.1| 407|Tribolium castaneum ultraspiracle
nuclear receptor protein.
Length = 407
Score = 21.4 bits (43), Expect = 6.9
Identities = 13/49 (26%), Positives = 19/49 (38%)
Frame = -3
Query: 342 NTPVNIY*GKCSRLCHRPGHI*RYRRKDRLPHTYPLSRFSNRCASCPSR 196
N+PV+ G L G+ P +PLS + C+ C R
Sbjct: 44 NSPVSFSMGGHGSLLSPSGNTPNKSSTSPYPPNHPLSGSKHLCSICGDR 92
>AJ005422-1|CAA06528.1| 287|Tribolium castaneum caudal protein
protein.
Length = 287
Score = 21.4 bits (43), Expect = 6.9
Identities = 5/11 (45%), Positives = 7/11 (63%)
Frame = +2
Query: 287 PGLWHRREHLP 319
P +WH H+P
Sbjct: 47 PQMWHHHSHMP 57
>AJ005421-1|CAA06527.1| 249|Tribolium castaneum caudal protein
protein.
Length = 249
Score = 21.4 bits (43), Expect = 6.9
Identities = 5/11 (45%), Positives = 7/11 (63%)
Frame = +2
Query: 287 PGLWHRREHLP 319
P +WH H+P
Sbjct: 47 PQMWHHHSHMP 57
>AY884065-1|AAX84206.1| 697|Tribolium castaneum laccase 1 protein.
Length = 697
Score = 21.0 bits (42), Expect = 9.1
Identities = 6/10 (60%), Positives = 9/10 (90%)
Frame = -2
Query: 139 KFLAHAHDDG 110
KF++H H+DG
Sbjct: 230 KFMSHIHNDG 239
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,948
Number of Sequences: 336
Number of extensions: 3918
Number of successful extensions: 18
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17385535
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -