Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C17
         (546 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical ...    31   0.72 
AL132949-1|CAB61068.2|  463|Caenorhabditis elegans Hypothetical ...    28   5.0  
AF098997-4|AAR12975.1|  107|Caenorhabditis elegans Insulin relat...    27   8.8  

>AL110487-7|CAB54431.1|  581|Caenorhabditis elegans Hypothetical
           protein Y39E4B.10 protein.
          Length = 581

 Score = 30.7 bits (66), Expect = 0.72
 Identities = 19/59 (32%), Positives = 31/59 (52%)
 Frame = +2

Query: 14  FFFFFCVQKIVLLQNILK*NLFYILN*QHFHINISRNFKTKSYKTNSIKQDTVDRPLSF 190
           FF FF + K +L +   K NLF+ L   +   +I  NFK    K+N+  Q + ++  +F
Sbjct: 323 FFNFFYISKKILTKKFFKKNLFFFLIFNNLEKSIFSNFK----KSNTFFQFSKNKIFNF 377


>AL132949-1|CAB61068.2|  463|Caenorhabditis elegans Hypothetical
           protein Y53F4B.1 protein.
          Length = 463

 Score = 27.9 bits (59), Expect = 5.0
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 3/59 (5%)
 Frame = +1

Query: 292 PQSHRMLSDDRTDDRRI-WRQV--FKLDGVRYPDAATMLWFPHDVFLHQKLRPILDLYR 459
           P S   L+D +TDD  I W  V  FKL    Y D   + +  HD  L + ++   D  R
Sbjct: 3   PLSSVELTDIKTDDLDIKWDNVQQFKLGDGSYADVFHVFYKGHDAVLKRSIKEYTDKER 61


>AF098997-4|AAR12975.1|  107|Caenorhabditis elegans Insulin related
           protein 19 protein.
          Length = 107

 Score = 27.1 bits (57), Expect = 8.8
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 6/46 (13%)
 Frame = +2

Query: 398 YGFLTMFSFTKSSGRF*------ICIGGIEPAPIDAESSRTTHCAI 517
           Y  L +F + ++ GR        +C+  I+PA ID +   + HC I
Sbjct: 37  YEVLMLFGYKRTCGRRLMNRINRVCVKDIDPADIDPKIKLSEHCCI 82


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,217,716
Number of Sequences: 27780
Number of extensions: 252349
Number of successful extensions: 533
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 533
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1102518352
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)