Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C16
         (529 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.                24   1.1  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   1.9  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   1.9  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    23   2.6  
M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee homeobox-...    22   3.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   5.9  

>AB167961-1|BAD51404.1|  554|Apis mellifera E74 protein.
          Length = 554

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 16/45 (35%), Positives = 20/45 (44%)
 Frame = -2

Query: 183 GGDTHRPAHSGGGTPSPTRARTNSAGDRISGSSTSLASPIRDGMN 49
           G   H P H+  G PS T A    A     GS +  ASP   G++
Sbjct: 209 GYGRHLPGHAQMGRPSYTTA--TMATTSTPGSGSLPASPADSGVS 251


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 144  YHRHYAPDGACRPPP 188
            YH H   +G   PPP
Sbjct: 1742 YHEHAMTEGCASPPP 1756


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 23.0 bits (47), Expect = 1.9
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = +3

Query: 144  YHRHYAPDGACRPPP 188
            YH H   +G   PPP
Sbjct: 1738 YHEHAMTEGCASPPP 1752


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.6 bits (46), Expect = 2.6
 Identities = 13/39 (33%), Positives = 22/39 (56%)
 Frame = -2

Query: 165 PAHSGGGTPSPTRARTNSAGDRISGSSTSLASPIRDGMN 49
           P++ GGG+ SP+ +  +S    +  S TSL S    G++
Sbjct: 81  PSYPGGGSSSPSPSSPSSFFSSV--SPTSLGSENYTGIS 117


>M29489-1|AAA27724.1|  109|Apis mellifera protein ( Bee
           homeobox-containing gene,partial cds, clone E60. ).
          Length = 109

 Score = 22.2 bits (45), Expect = 3.4
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = -2

Query: 150 GGTPSPTRARTNSAGDRIS 94
           GGTP   R RT  +G++++
Sbjct: 15  GGTPEEKRPRTAFSGEQLA 33


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.4 bits (43), Expect = 5.9
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 153  HYAPDGACRPPP 188
            H AP+  C PPP
Sbjct: 1694 HCAPNRRCPPPP 1705


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,352
Number of Sequences: 438
Number of extensions: 3529
Number of successful extensions: 10
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14845611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)