Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_C14
(579 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.073
SB_16978| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055) 29 2.7
SB_52009| Best HMM Match : Plasmodium_HRP (HMM E-Value=7.9) 29 2.7
SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 4.8
SB_52568| Best HMM Match : 7tm_1 (HMM E-Value=1e-07) 28 4.8
SB_41719| Best HMM Match : Pro_racemase (HMM E-Value=1.2e-07) 28 6.3
SB_32490| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.3
SB_45632| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_33008| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_22363| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_4748| Best HMM Match : RVT_1 (HMM E-Value=0.0022) 27 8.4
SB_37158| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.4
SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0) 27 8.4
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 34.3 bits (75), Expect = 0.073
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Frame = +3
Query: 357 RRTSPLTRVKMSQPYERSNKRQCESRARNVTRECLQQTPVLLHSNSPSTFTASKHSWTI- 533
R TS S+ ERS +R+ E+ R+ + C TPV H SPST ++ + +
Sbjct: 1172 RSTSDPRGSLSSERPERSRRRRTETEPRDSSLPCTASTPV-SHDQSPSTLSSIQQDSVVL 1230
Query: 534 --KSISTSTQTA 563
+ +STS T+
Sbjct: 1231 ATRLVSTSESTS 1242
>SB_16978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 875
Score = 29.5 bits (63), Expect = 2.1
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 2/60 (3%)
Frame = +3
Query: 330 VQFFIHS*WRRTSPLTRVKM--SQPYERSNKRQCESRARNVTRECLQQTPVLLHSNSPST 503
+ +FI WR + L+R+ P E +N+ A NVT E V+ HSN T
Sbjct: 811 IAYFIS--WRFSKRLSRINSRGDMPMEIANQSAPTEEANNVTGEMTNGKAVVKHSNESQT 868
>SB_33554| Best HMM Match : Sushi (HMM E-Value=0.00055)
Length = 685
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 397 HTSARTSDNANRARETLPGSVCNKHQSSYTATRHRHSRLR 516
H +ART A + T PG+ + H Y A H H++ R
Sbjct: 271 HANARTRTQARKCTYTHPGTQMHVHAHKY-ANAHTHTQTR 309
>SB_52009| Best HMM Match : Plasmodium_HRP (HMM E-Value=7.9)
Length = 231
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/40 (35%), Positives = 20/40 (50%)
Frame = +1
Query: 397 HTSARTSDNANRARETLPGSVCNKHQSSYTATRHRHSRLR 516
H +ART A + T PG+ + H Y A H H++ R
Sbjct: 46 HANARTRTQARKCTYTHPGTQMHVHAHKY-ANAHTHTQTR 84
>SB_52935| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1333
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = +2
Query: 257 SAKIITFLAYLEGPVLDTMLPKGKGTILHSFVMATDKSL 373
S + T L Y E P++ T LP + ++H+F+ T+ +
Sbjct: 143 SPMVHTSLPYTESPMVHTSLPYTESLMVHTFLPYTESPM 181
>SB_27892| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1441
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 430 RARETLPGSVCNKHQSSYTATRHRHSRLRSTLGLSNQSVRRLKRREDLW 576
RA T+P +V Q T TRH HS S+L ++ + DLW
Sbjct: 354 RAHPTIPITVSLDKQ---TTTRHSHSARNSSLQAEVSAIADTGAQSDLW 399
>SB_52568| Best HMM Match : 7tm_1 (HMM E-Value=1e-07)
Length = 323
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/58 (25%), Positives = 30/58 (51%)
Frame = -1
Query: 327 LPLGSIVSSTGPSKYAKNVIILADPPVSLISGSSRASKFNATAMSAPFSINTNKILLL 154
+P + STG + + II P V++ S + + FN +A+S+ ++ + I+ L
Sbjct: 256 VPSSGVTHSTGWTSSSTIKIIKVKPAVNVTSSAWMMTSFNGSALSSQATVESGGIVNL 313
>SB_41719| Best HMM Match : Pro_racemase (HMM E-Value=1.2e-07)
Length = 219
Score = 27.9 bits (59), Expect = 6.3
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = -2
Query: 521 VLRSRECRWRVAV*EDWCLLQTLPGNVSRARFALSLVRALVWL 393
VLR R+C WR+ + D C G+ + AR A+ + L+ L
Sbjct: 120 VLRPRKCTWRIRIKVDRCPC----GSGTTARIAVQYAKQLIGL 158
>SB_32490| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 356
Score = 27.9 bits (59), Expect = 6.3
Identities = 18/59 (30%), Positives = 24/59 (40%)
Frame = +1
Query: 352 NGDGQVP*RA*KCRSHTSARTSDNANRARETLPGSVCNKHQSSYTATRHRHSRLRSTLG 528
NG G R R TS+ N + L GS CN+H + Y A R+ + G
Sbjct: 272 NGSGLCQVRINFKRKPAEECTSNCNNLSHAFLSGSFCNRHMTVYAALSCFRLRMNALTG 330
>SB_45632| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/33 (39%), Positives = 19/33 (57%)
Frame = +3
Query: 480 LHSNSPSTFTASKHSWTIKSISTSTQTARGSLA 578
L +P++FT +KHS+ + S AR SLA
Sbjct: 139 LRKTNPNSFTCTKHSFQLSDDRFSELCARQSLA 171
>SB_33008| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1016
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = +2
Query: 173 VLIEKGALIAVALNLDARDEPEIKLTGGSAKIITFLAYLE 292
V +EK +L A L RD+ K TG +++ LAY E
Sbjct: 933 VCLEKWSLRMAAKKLRRRDKETYKQTGTEERLLRALAYRE 972
>SB_22363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 301
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +1
Query: 454 SVCNKHQSSYTATRHRHSRLRSTLGLSNQSVRR 552
S C KH+ + A++H+ + RST + ++ R
Sbjct: 46 SACTKHEECFVASQHKDTGRRSTCRIYGYNIFR 78
>SB_4748| Best HMM Match : RVT_1 (HMM E-Value=0.0022)
Length = 1012
Score = 27.5 bits (58), Expect = 8.4
Identities = 17/49 (34%), Positives = 23/49 (46%)
Frame = +1
Query: 430 RARETLPGSVCNKHQSSYTATRHRHSRLRSTLGLSNQSVRRLKRREDLW 576
RA T+P +V Q T TRH HS S+L ++ + DLW
Sbjct: 64 RAHPTVPINVSLDKQ---TTTRHSHSARNSSLQAEVSAIADTCTQSDLW 109
>SB_37158| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1421
Score = 27.5 bits (58), Expect = 8.4
Identities = 10/27 (37%), Positives = 16/27 (59%)
Frame = +1
Query: 457 VCNKHQSSYTATRHRHSRLRSTLGLSN 537
+CN+H Y+ HS+L+S L L +
Sbjct: 628 LCNEHVEKYSRWLREHSQLKSVLSLKD 654
>SB_27584| Best HMM Match : F5_F8_type_C (HMM E-Value=0)
Length = 7381
Score = 27.5 bits (58), Expect = 8.4
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = -3
Query: 445 TFLARDSHCRLFERSYGCDIFTRVKGLVRRHYE*MKNCT 329
T + R SH L ER+YG T V VR Y+ ++ T
Sbjct: 7223 TLVTRRSHAELIERTYGFRAGTTVYCQVRVRYQGKRDWT 7261
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,052,095
Number of Sequences: 59808
Number of extensions: 407935
Number of successful extensions: 1297
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1385833362
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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