Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C13
         (644 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    27   0.13 
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    26   0.31 
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    21   8.7  

>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 27.1 bits (57), Expect = 0.13
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = -1

Query: 308 AAGHIRTHRPQLPQQRTVSTVSI 240
           A G +  HRP L QQR V+ V +
Sbjct: 299 AGGPLHDHRPALAQQRRVAAVQV 321


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.8 bits (54), Expect = 0.31
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 291 NTSPATASTAHSQYCLYMSNTFNHIFKYY 205
           NT     S    +Y  Y  NT+ H+F ++
Sbjct: 333 NTCSQIPSEVEDKYTTYFLNTYPHLFNFF 361


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/25 (28%), Positives = 16/25 (64%)
 Frame = +2

Query: 287 VFEYVLRRWVHVQTLQQGEQRAGPH 361
           ++EY++R + + +  +QG Q +  H
Sbjct: 109 IYEYIMRNFPYYRENKQGWQNSIRH 133


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,744
Number of Sequences: 336
Number of extensions: 3022
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)