Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_C13
(644 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
CR457367-1|CAG33648.1| 757|Homo sapiens IPO4 protein. 30 6.1
BC110804-1|AAI10805.1| 1081|Homo sapiens importin 4 protein. 30 6.1
BC003690-1|AAH03690.2| 787|Homo sapiens IPO4 protein protein. 30 6.1
AK126902-1|BAC86743.1| 247|Homo sapiens protein ( Homo sapiens ... 30 6.1
AK090647-1|BAC03496.1| 353|Homo sapiens protein. 30 6.1
AK074743-1|BAC11174.1| 525|Homo sapiens protein ( Homo sapiens ... 30 6.1
AK027871-1|BAB55421.1| 434|Homo sapiens protein ( Homo sapiens ... 30 6.1
AK026991-1|BAB15616.1| 757|Homo sapiens protein ( Homo sapiens ... 30 6.1
AF411122-1|AAL78660.1| 1081|Homo sapiens importin 4 protein. 30 6.1
AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant prot... 30 6.1
AB208897-1|BAD92134.1| 758|Homo sapiens IPO4 protein variant pr... 30 6.1
>CR457367-1|CAG33648.1| 757|Homo sapiens IPO4 protein.
Length = 757
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 409 RDDVIGWLARLVMQSEVRAGTLLTLLQCLHVDPTPQDIFEHI 284
RD++ G LARL+M S R L LH P +D+ E +
Sbjct: 634 RDNICGALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWV 675
>BC110804-1|AAI10805.1| 1081|Homo sapiens importin 4 protein.
Length = 1081
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 409 RDDVIGWLARLVMQSEVRAGTLLTLLQCLHVDPTPQDIFEHI 284
RD++ G LARL+M S R L LH P +D+ E +
Sbjct: 958 RDNICGALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWV 999
>BC003690-1|AAH03690.2| 787|Homo sapiens IPO4 protein protein.
Length = 787
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 409 RDDVIGWLARLVMQSEVRAGTLLTLLQCLHVDPTPQDIFEHI 284
RD++ G LARL+M S R L LH P +D+ E +
Sbjct: 664 RDNICGALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWV 705
>AK126902-1|BAC86743.1| 247|Homo sapiens protein ( Homo sapiens
cDNA FLJ44954 fis, clone BRAWH2010364. ).
Length = 247
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 3/19 (15%)
Frame = -3
Query: 372 CSRRCGPA---RCSPCCSV 325
CS RC P RCSPCCS+
Sbjct: 98 CSLRCSPCCSLRCSPCCSL 116
>AK090647-1|BAC03496.1| 353|Homo sapiens protein.
Length = 353
Score = 30.3 bits (65), Expect = 6.1
Identities = 12/19 (63%), Positives = 13/19 (68%), Gaps = 3/19 (15%)
Frame = -3
Query: 372 CSRRCGPA---RCSPCCSV 325
CS RC P RCSPCCS+
Sbjct: 98 CSLRCSPCCSLRCSPCCSL 116
>AK074743-1|BAC11174.1| 525|Homo sapiens protein ( Homo sapiens
cDNA FLJ90262 fis, clone NT2RM4000965, weakly similar to
PUTATIVE IMPORTIN BETA-4 SUBUNIT. ).
Length = 525
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 409 RDDVIGWLARLVMQSEVRAGTLLTLLQCLHVDPTPQDIFEHI 284
RD++ G LARL+M S R L LH P +D+ E +
Sbjct: 400 RDNICGALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWV 441
>AK027871-1|BAB55421.1| 434|Homo sapiens protein ( Homo sapiens
cDNA FLJ14965 fis, clone SKNMC1000011, weakly similar to
PUTATIVE IMPORTIN BETA-4 SUBUNIT. ).
Length = 434
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 409 RDDVIGWLARLVMQSEVRAGTLLTLLQCLHVDPTPQDIFEHI 284
RD++ G LARL+M S R L LH P +D+ E +
Sbjct: 311 RDNICGALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWV 352
>AK026991-1|BAB15616.1| 757|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23338 fis, clone HEP13242. ).
Length = 757
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 409 RDDVIGWLARLVMQSEVRAGTLLTLLQCLHVDPTPQDIFEHI 284
RD++ G LARL+M S R L LH P +D+ E +
Sbjct: 634 RDNICGALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWV 675
>AF411122-1|AAL78660.1| 1081|Homo sapiens importin 4 protein.
Length = 1081
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 409 RDDVIGWLARLVMQSEVRAGTLLTLLQCLHVDPTPQDIFEHI 284
RD++ G LARL+M S R L LH P +D+ E +
Sbjct: 958 RDNICGALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWV 999
>AB209476-1|BAD92713.1| 1264|Homo sapiens importin 4 variant protein.
Length = 1264
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 409 RDDVIGWLARLVMQSEVRAGTLLTLLQCLHVDPTPQDIFEHI 284
RD++ G LARL+M S R L LH P +D+ E +
Sbjct: 1141 RDNICGALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWV 1182
>AB208897-1|BAD92134.1| 758|Homo sapiens IPO4 protein variant
protein.
Length = 758
Score = 30.3 bits (65), Expect = 6.1
Identities = 16/42 (38%), Positives = 22/42 (52%)
Frame = -2
Query: 409 RDDVIGWLARLVMQSEVRAGTLLTLLQCLHVDPTPQDIFEHI 284
RD++ G LARL+M S R L LH P +D+ E +
Sbjct: 635 RDNICGALARLLMASPTRKPEPQVLAALLHALPLKEDLEEWV 676
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,188,982
Number of Sequences: 237096
Number of extensions: 1745627
Number of successful extensions: 7764
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 7504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7758
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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