Samia BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C13
         (644 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF273708-1|AAL35411.1|  118|Drosophila melanogaster PFTAIRE-inte...    31   1.0  
AE014297-475|AAF54113.3|  118|Drosophila melanogaster CG31483-PA...    31   1.0  
AE014298-1805|AAF48197.1|  745|Drosophila melanogaster CG15725-P...    29   7.1  

>AF273708-1|AAL35411.1|  118|Drosophila melanogaster
           PFTAIRE-interacting factor 2 protein.
          Length = 118

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -3

Query: 372 CSRRCGPARCSPCCSVC 322
           CS  CGP  CSPCCS C
Sbjct: 42  CSPCCGPC-CSPCCSPC 57



 Score = 31.5 bits (68), Expect = 1.0
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -3

Query: 372 CSRRCGPARCSPCCSVC 322
           CS  CGP  CSPCCS C
Sbjct: 97  CSPCCGPC-CSPCCSPC 112



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 372 CSRRCGPARCSPCCSVC 322
           C   CGP  CSPCCS C
Sbjct: 6   CGSCCGPC-CSPCCSPC 21



 Score = 29.9 bits (64), Expect = 3.1
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 372 CSRRCGPARCSPCCSVC 322
           CS  CGP  CSPCC  C
Sbjct: 34  CSPCCGPC-CSPCCGPC 49


>AE014297-475|AAF54113.3|  118|Drosophila melanogaster CG31483-PA
           protein.
          Length = 118

 Score = 31.5 bits (68), Expect = 1.0
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -3

Query: 372 CSRRCGPARCSPCCSVC 322
           CS  CGP  CSPCCS C
Sbjct: 42  CSPCCGPC-CSPCCSPC 57



 Score = 31.5 bits (68), Expect = 1.0
 Identities = 12/17 (70%), Positives = 12/17 (70%)
 Frame = -3

Query: 372 CSRRCGPARCSPCCSVC 322
           CS  CGP  CSPCCS C
Sbjct: 97  CSPCCGPC-CSPCCSPC 112



 Score = 30.3 bits (65), Expect = 2.3
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 372 CSRRCGPARCSPCCSVC 322
           C   CGP  CSPCCS C
Sbjct: 6   CGSCCGPC-CSPCCSPC 21



 Score = 29.9 bits (64), Expect = 3.1
 Identities = 11/17 (64%), Positives = 11/17 (64%)
 Frame = -3

Query: 372 CSRRCGPARCSPCCSVC 322
           CS  CGP  CSPCC  C
Sbjct: 34  CSPCCGPC-CSPCCGPC 49


>AE014298-1805|AAF48197.1|  745|Drosophila melanogaster CG15725-PA
           protein.
          Length = 745

 Score = 28.7 bits (61), Expect = 7.1
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
 Frame = -3

Query: 315 TQRRRTYSNTSPATASTAHSQ---YCLYMSNTFNHIFKYYCDGKNHENRLHQSDN 160
           +Q   T + +  ATAS+A +Q    C+Y  +TF   + Y    K H N L  + N
Sbjct: 550 SQATGTGTGSGSATASSAGNQELYVCVYCKHTFKSQYCYQKHAKRHLNPLTLTTN 604


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,558,387
Number of Sequences: 53049
Number of extensions: 565306
Number of successful extensions: 2059
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1854
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2044
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2724262200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)