Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_C11
(483 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein. 25 0.32
DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein. 25 0.42
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 24 0.74
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 24 0.74
EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 21 5.2
EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 21 5.2
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 21 6.9
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 6.9
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 9.1
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 21 9.1
AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein. 21 9.1
>AY921579-1|AAX14899.1| 996|Apis mellifera ephrin receptor protein.
Length = 996
Score = 25.4 bits (53), Expect = 0.32
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +2
Query: 305 YYTPERNPKEADYTAPIYAPQN 370
Y+ E++PK+ T P APQN
Sbjct: 302 YFRAEKDPKKMPCTQPPSAPQN 323
>DQ435329-1|ABD92644.1| 150|Apis mellifera OBP12 protein.
Length = 150
Score = 25.0 bits (52), Expect = 0.42
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 13 DRSILAIXXXXXXXDSFEYWIFLAQHQENIRDYPC 117
DRS + DS E I L +EN R+Y C
Sbjct: 36 DRSNMTFHELKKLRDSSEARIKLINEEENFRNYGC 70
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 24.2 bits (50), Expect = 0.74
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 107 TTPVDDKESEHREGFTALV 163
T P+DD S+ EGF A++
Sbjct: 150 TNPLDDSISQANEGFCAVI 168
Score = 21.0 bits (42), Expect = 6.9
Identities = 17/75 (22%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
Frame = +2
Query: 128 ESEHREGFTALVREMKQALNVKPNMQLVISVLPNV-NSSIYFDV--PSIINLV-----DI 283
E +H+ F + + + P ++ SV N++ Y P ++ D+
Sbjct: 279 EQQHKAMFLVVTAQPVHSAYKAPEETIISSVFTTRHNATCYLSHVDPDVVQYFGYLPQDM 338
Query: 284 VNIQAFDYYTPERNP 328
V FD+Y PE P
Sbjct: 339 VGRSLFDFYHPEDLP 353
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 24.2 bits (50), Expect = 0.74
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 107 TTPVDDKESEHREGFTALV 163
T P+DD S+ EGF A++
Sbjct: 145 TNPLDDSISQANEGFCAVI 163
>EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein.
Length = 684
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 419 NGAPYPQTCPWVSAPL 466
NG P+PQ W + P+
Sbjct: 303 NGLPFPQRPIWSNFPI 318
>EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein.
Length = 684
Score = 21.4 bits (43), Expect = 5.2
Identities = 7/16 (43%), Positives = 10/16 (62%)
Frame = +2
Query: 419 NGAPYPQTCPWVSAPL 466
NG P+PQ W + P+
Sbjct: 303 NGLPFPQRPIWSNFPI 318
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 21.0 bits (42), Expect = 6.9
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +3
Query: 72 DLSGTASRKHSGLPLLM 122
D++G +KH PLLM
Sbjct: 131 DIAGLRKKKHKVNPLLM 147
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.0 bits (42), Expect = 6.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = +3
Query: 198 ICS*LSAFCQT*IAPFTLTS 257
IC+ L+A CQ + F +TS
Sbjct: 644 ICTKLTADCQPGVTAFIVTS 663
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 20.6 bits (41), Expect = 9.1
Identities = 7/21 (33%), Positives = 13/21 (61%)
Frame = -1
Query: 153 VKPSLCSDSLSSTGVVPNVFL 91
V ++CSD S GV+ ++ +
Sbjct: 971 VNETVCSDYFSQGGVIESIMV 991
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 20.6 bits (41), Expect = 9.1
Identities = 10/21 (47%), Positives = 11/21 (52%)
Frame = +2
Query: 419 NGAPYPQTCPWVSAPLDVRGS 481
+GAP PQ P S RGS
Sbjct: 18 SGAPGPQPSPHQSPQAPQRGS 38
>AB050744-1|BAB17753.1| 238|Apis mellifera period protein protein.
Length = 238
Score = 20.6 bits (41), Expect = 9.1
Identities = 8/17 (47%), Positives = 10/17 (58%)
Frame = +2
Query: 278 DIVNIQAFDYYTPERNP 328
D+V FD+Y PE P
Sbjct: 43 DMVGRSLFDFYHPEDLP 59
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 131,168
Number of Sequences: 438
Number of extensions: 2642
Number of successful extensions: 12
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13174803
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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