Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C09
         (371 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   2.3  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   3.1  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   3.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.4  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   5.4  

>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 2.3
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -3

Query: 342 PSGCTFTSTFFLS 304
           P+GC   +TFF+S
Sbjct: 222 PNGCDIKATFFVS 234


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 342 PSGCTFTSTFFLS 304
           P+GC    TFF+S
Sbjct: 214 PNGCQIRGTFFVS 226


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.4 bits (43), Expect = 3.1
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 342 PSGCTFTSTFFLS 304
           P+GC    TFF+S
Sbjct: 221 PNGCQIRGTFFVS 233


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 34  PELIYCM*NEIISKHDCH 87
           P+L  CM N +I+ H  H
Sbjct: 608 PKLQLCMQNLVINPHQQH 625


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 20.6 bits (41), Expect = 5.4
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = +3

Query: 234 VCCVKNSSFYRNRVHMWVKL 293
           V  + + SF+RN +H+ + L
Sbjct: 48  VVSIYSKSFHRNEIHIKIVL 67


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,368
Number of Sequences: 336
Number of extensions: 1459
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 50
effective length of database: 105,785
effective search space used:  7722305
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)