Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C09
         (371 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z98866-1|CAB11558.1|  416|Caenorhabditis elegans Hypothetical pr...   110   3e-25
AF099922-3|AAK21407.2|  411|Caenorhabditis elegans Hypothetical ...    99   1e-21
AF099922-2|AAM48537.1|  432|Caenorhabditis elegans Hypothetical ...    99   1e-21
Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical pr...    28   2.4  
Z81077-9|CAD56582.1|  565|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z81077-8|CAB03072.2|  528|Caenorhabditis elegans Hypothetical pr...    27   4.3  
Z83116-2|CAB05560.1|  320|Caenorhabditis elegans Hypothetical pr...    26   7.5  
Z81132-10|CAB03433.1|  320|Caenorhabditis elegans Hypothetical p...    26   7.5  
Z46381-10|CAE17898.2|  366|Caenorhabditis elegans Hypothetical p...    26   7.5  
Z82051-3|CAB04817.1|  337|Caenorhabditis elegans Hypothetical pr...    26   9.9  
Z79694-8|CAB01965.1|  872|Caenorhabditis elegans Hypothetical pr...    26   9.9  
Z72506-9|CAA96622.1|  872|Caenorhabditis elegans Hypothetical pr...    26   9.9  
X08068-1|CAA30857.1|  882|Caenorhabditis elegans paramyosin prot...    26   9.9  

>Z98866-1|CAB11558.1|  416|Caenorhabditis elegans Hypothetical
           protein Y49E10.1 protein.
          Length = 416

 Score =  110 bits (265), Expect = 3e-25
 Identities = 56/94 (59%), Positives = 69/94 (73%)
 Frame = +2

Query: 80  TVTKMEVDSTKGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXX 259
           T  K+  +S + +  R Y+ TK+++ Q  VA+KSQN+RRLQAQRNELN KVRML+     
Sbjct: 17  TAQKLTEESDE-KTLRKYFSTKVDDAQQKVADKSQNVRRLQAQRNELNTKVRMLKEELQQ 75

Query: 260 XXXXGSYVGEVVKPMDKKKVLVKVHPEGKFVVDL 361
               GSYVGEV K MDKKKVLVKVHPEGK+VVD+
Sbjct: 76  LHEQGSYVGEVSKAMDKKKVLVKVHPEGKYVVDV 109


>AF099922-3|AAK21407.2|  411|Caenorhabditis elegans Hypothetical
           protein F56F11.4a protein.
          Length = 411

 Score = 98.7 bits (235), Expect = 1e-21
 Identities = 46/79 (58%), Positives = 59/79 (74%)
 Frame = +2

Query: 125 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 304
           RPY+ TK+E+ +  VAEKS N+RRL AQ+ ELN KVR+L+         GS+VGEV K M
Sbjct: 26  RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 85

Query: 305 DKKKVLVKVHPEGKFVVDL 361
           DKKKVLVK HP+GK++VD+
Sbjct: 86  DKKKVLVKNHPDGKYIVDV 104


>AF099922-2|AAM48537.1|  432|Caenorhabditis elegans Hypothetical
           protein F56F11.4b protein.
          Length = 432

 Score = 98.7 bits (235), Expect = 1e-21
 Identities = 46/79 (58%), Positives = 59/79 (74%)
 Frame = +2

Query: 125 RPYYITKIEELQLIVAEKSQNLRRLQAQRNELNAKVRMLRXXXXXXXXXGSYVGEVVKPM 304
           RPY+ TK+E+ +  VAEKS N+RRL AQ+ ELN KVR+L+         GS+VGEV K M
Sbjct: 47  RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAM 106

Query: 305 DKKKVLVKVHPEGKFVVDL 361
           DKKKVLVK HP+GK++VD+
Sbjct: 107 DKKKVLVKNHPDGKYIVDV 125


>Z68161-9|CAA92298.2|  688|Caenorhabditis elegans Hypothetical
           protein F20C5.5 protein.
          Length = 688

 Score = 27.9 bits (59), Expect = 2.4
 Identities = 15/49 (30%), Positives = 26/49 (53%)
 Frame = +2

Query: 74  NMTVTKMEVDSTKGEGFRPYYITKIEELQLIVAEKSQNLRRLQAQRNEL 220
           N  ++  E  ST  E    Y    +E+ Q  +AEK QN+++L+ +  +L
Sbjct: 78  NTEISTQESTSTSTE----YQFATLEDFQNAMAEKDQNIKKLKEEVEKL 122


>Z81077-9|CAD56582.1|  565|Caenorhabditis elegans Hypothetical
           protein F36A2.9b protein.
          Length = 565

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 284 GEVVKPMDKKKVLVKVHPEGKFVVD 358
           G VV  +D+K +  + H EGKF+VD
Sbjct: 16  GSVVPNVDQKILRGEFHDEGKFMVD 40


>Z81077-8|CAB03072.2|  528|Caenorhabditis elegans Hypothetical
           protein F36A2.9a protein.
          Length = 528

 Score = 27.1 bits (57), Expect = 4.3
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = +2

Query: 284 GEVVKPMDKKKVLVKVHPEGKFVVD 358
           G VV  +D+K +  + H EGKF+VD
Sbjct: 16  GSVVPNVDQKILRGEFHDEGKFMVD 40


>Z83116-2|CAB05560.1|  320|Caenorhabditis elegans Hypothetical
           protein M01B2.2 protein.
          Length = 320

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +3

Query: 156 CNLSWLKSLKIFVVYKLNVMN*TLKYVCCVKNSSFYRNRVHMWVKLSN 299
           CNL W+ S  IF  Y L V + ++K +  V       + +HM   +SN
Sbjct: 97  CNLIWMISSYIFRYYILYVRDPSIKSLVFVAICLSIPSFIHMATWISN 144


>Z81132-10|CAB03433.1|  320|Caenorhabditis elegans Hypothetical
           protein T26E4.12 protein.
          Length = 320

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +3

Query: 156 CNLSWLKSLKIFVVYKLNVMN*TLKYVCCVKNSSFYRNRVHMWVKLSN 299
           CNL W+ S  IF  Y L V + ++K +  V       + +HM   +SN
Sbjct: 97  CNLIWMISSYIFRYYILYVRDPSIKSLVFVAICLSIPSFIHMATWISN 144


>Z46381-10|CAE17898.2|  366|Caenorhabditis elegans Hypothetical
           protein M01F1.9 protein.
          Length = 366

 Score = 26.2 bits (55), Expect = 7.5
 Identities = 13/21 (61%), Positives = 16/21 (76%), Gaps = 2/21 (9%)
 Frame = -3

Query: 333 CTFT--STFFLSIGLTTSPTY 277
           CTF+  STF LSI LT +PT+
Sbjct: 271 CTFSPDSTFRLSIPLTATPTF 291


>Z82051-3|CAB04817.1|  337|Caenorhabditis elegans Hypothetical
           protein T23D5.6 protein.
          Length = 337

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 8/27 (29%), Positives = 17/27 (62%)
 Frame = +3

Query: 123 FVLTTSRKLKNCNLSWLKSLKIFVVYK 203
           +V+T  R+   C L+W ++ KI  +++
Sbjct: 305 YVITDYRRAFQCELNWFENSKILKIFR 331


>Z79694-8|CAB01965.1|  872|Caenorhabditis elegans Hypothetical
           protein F07A5.7 protein.
          Length = 872

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 143 KIEELQLIVAEKSQNLRRLQAQRNELNAKV 232
           K+E+L   V + +Q  +RLQA+ N+L  +V
Sbjct: 189 KVEDLNKHVNDLAQQRQRLQAENNDLLKEV 218


>Z72506-9|CAA96622.1|  872|Caenorhabditis elegans Hypothetical
           protein F07A5.7 protein.
          Length = 872

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 143 KIEELQLIVAEKSQNLRRLQAQRNELNAKV 232
           K+E+L   V + +Q  +RLQA+ N+L  +V
Sbjct: 189 KVEDLNKHVNDLAQQRQRLQAENNDLLKEV 218


>X08068-1|CAA30857.1|  882|Caenorhabditis elegans paramyosin
           protein.
          Length = 882

 Score = 25.8 bits (54), Expect = 9.9
 Identities = 12/30 (40%), Positives = 20/30 (66%)
 Frame = +2

Query: 143 KIEELQLIVAEKSQNLRRLQAQRNELNAKV 232
           K+E+L   V + +Q  +RLQA+ N+L  +V
Sbjct: 205 KVEDLNKHVNDLAQQRQRLQAENNDLLKEV 234


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,664,042
Number of Sequences: 27780
Number of extensions: 130775
Number of successful extensions: 400
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 398
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 12,740,198
effective HSP length: 73
effective length of database: 10,712,258
effective search space used: 535612900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)