BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_C07
(381 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q9VB13 Cluster: CG31057-PA; n=5; Diptera|Rep: CG31057-P... 45 4e-04
UniRef50_A5K2S4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.19
UniRef50_Q9ZK52 Cluster: Putative; n=4; Helicobacter|Rep: Putati... 34 1.0
UniRef50_Q4PIC2 Cluster: Putative uncharacterized protein; n=1; ... 34 1.0
UniRef50_UPI000155B9E6 Cluster: PREDICTED: hypothetical protein;... 33 1.4
UniRef50_A7RX03 Cluster: Predicted protein; n=1; Nematostella ve... 33 1.4
UniRef50_Q4TAN6 Cluster: Chromosome 21 SCAF7282, whole genome sh... 33 1.8
UniRef50_Q17BH3 Cluster: Putative uncharacterized protein; n=1; ... 33 1.8
UniRef50_UPI00015B5480 Cluster: PREDICTED: similar to microtubul... 33 2.4
UniRef50_Q90834 Cluster: ECH; n=4; Amniota|Rep: ECH - Gallus gal... 32 4.2
UniRef50_Q1F0A8 Cluster: Peptidil-prolyl cis-trans isomerase; n=... 32 4.2
UniRef50_Q24167 Cluster: Protein similar; n=7; Diptera|Rep: Prot... 32 4.2
UniRef50_UPI00006CAFCC Cluster: hypothetical protein TTHERM_0046... 31 5.5
UniRef50_Q2GKW9 Cluster: Type IV secretion systemprotein, VirB6 ... 31 5.5
UniRef50_A5K6H1 Cluster: Putative uncharacterized protein; n=1; ... 31 5.5
UniRef50_A7EW49 Cluster: Putative uncharacterized protein; n=1; ... 31 5.5
UniRef50_Q9VF63 Cluster: CG6118-PA; n=4; Diptera|Rep: CG6118-PA ... 31 7.3
UniRef50_Q7RLD9 Cluster: Amine oxidase, flavin-containing, putat... 31 7.3
UniRef50_Q54IS9 Cluster: Putative uncharacterized protein; n=1; ... 31 7.3
UniRef50_A6R1J6 Cluster: Predicted protein; n=1; Ajellomyces cap... 31 7.3
UniRef50_A0RZ95 Cluster: Putative uncharacterized protein; n=5; ... 31 7.3
UniRef50_UPI00015B440F Cluster: PREDICTED: similar to protease, ... 31 9.6
UniRef50_UPI0000D56B1D Cluster: PREDICTED: similar to CG1845-PA;... 31 9.6
UniRef50_Q0A742 Cluster: Na+/solute symporter; n=2; Alkalilimnic... 31 9.6
UniRef50_A3ZT17 Cluster: Putative large multi-functional protein... 31 9.6
UniRef50_A1W0J4 Cluster: DedA family protein; n=12; Campylobacte... 31 9.6
UniRef50_Q9VWS3 Cluster: CG6606-PA; n=4; Sophophora|Rep: CG6606-... 31 9.6
UniRef50_Q95QG2 Cluster: Temporarily assigned gene name protein ... 31 9.6
UniRef50_Q8I452 Cluster: Putative uncharacterized protein PFE024... 31 9.6
UniRef50_Q8I2W6 Cluster: Putative uncharacterized protein PFI091... 31 9.6
>UniRef50_Q9VB13 Cluster: CG31057-PA; n=5; Diptera|Rep: CG31057-PA -
Drosophila melanogaster (Fruit fly)
Length = 361
Score = 45.2 bits (102), Expect = 4e-04
Identities = 24/44 (54%), Positives = 28/44 (63%)
Frame = +3
Query: 135 AGKHADKHNTDGDNDSGVDESTQGHDMNGSPGSPNKKIPSKLPT 266
A A++ +GDNDSGVDESTQ D NG P SP+ P K PT
Sbjct: 72 ANARANQDQKEGDNDSGVDESTQEKDRNG-PNSPSS--PVKTPT 112
>UniRef50_A5K2S4 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 690
Score = 36.3 bits (80), Expect = 0.19
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +3
Query: 105 IMSEVNESIAAGKHADKHNTDGDNDSGVDESTQGHDMNGSPGS 233
+ S N + G+ ADK NT G N+SG ++ +GH+ +G GS
Sbjct: 484 VASSANRNSGGGE-ADKMNTGGGNNSGSGKNVRGHNNSGGGGS 525
>UniRef50_Q9ZK52 Cluster: Putative; n=4; Helicobacter|Rep: Putative
- Helicobacter pylori J99 (Campylobacter pylori J99)
Length = 193
Score = 33.9 bits (74), Expect = 1.0
Identities = 13/41 (31%), Positives = 25/41 (60%)
Frame = -3
Query: 370 FFFSIDGGFSGVLAVALLLEDRERLAFKLLLDFSFVGNLLG 248
F +S+ GG+ G++ ++L L K+ + +F+GNL+G
Sbjct: 21 FLYSLGGGYVGIVIASILSATTHALDIKITILVAFLGNLIG 61
>UniRef50_Q4PIC2 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 1342
Score = 33.9 bits (74), Expect = 1.0
Identities = 17/40 (42%), Positives = 22/40 (55%)
Frame = +3
Query: 126 SIAAGKHADKHNTDGDNDSGVDESTQGHDMNGSPGSPNKK 245
SIAA D D DS +D+ST D+ G+ GS NK+
Sbjct: 301 SIAASLPHDDSTFDPSMDSSIDDSTVNMDLTGTHGSVNKR 340
>UniRef50_UPI000155B9E6 Cluster: PREDICTED: hypothetical protein;
n=1; Ornithorhynchus anatinus|Rep: PREDICTED:
hypothetical protein - Ornithorhynchus anatinus
Length = 1382
Score = 33.5 bits (73), Expect = 1.4
Identities = 22/52 (42%), Positives = 32/52 (61%)
Frame = +3
Query: 114 EVNESIAAGKHADKHNTDGDNDSGVDESTQGHDMNGSPGSPNKKIPSKLPTK 269
EV +S AA + D N D D D VDE ++ H + SP S +K++P+ LPT+
Sbjct: 31 EVLQSRAA--NVDIPNVDRDQDQSVDERSERHAI-ASPPSNSKQLPT-LPTQ 78
>UniRef50_A7RX03 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 387
Score = 33.5 bits (73), Expect = 1.4
Identities = 18/56 (32%), Positives = 27/56 (48%)
Frame = +3
Query: 84 CYWNVDCIMSEVNESIAAGKHADKHNTDGDNDSGVDESTQGHDMNGSPGSPNKKIP 251
C +D IMS ++A + NTD D+D + E T+ ++ GSP K P
Sbjct: 115 CEALLDKIMSSKPSTLADSRGQPDQNTDSDDDEDLRELTKEYESEDLTGSPLKSEP 170
>UniRef50_Q4TAN6 Cluster: Chromosome 21 SCAF7282, whole genome
shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 21
SCAF7282, whole genome shotgun sequence - Tetraodon
nigroviridis (Green puffer)
Length = 398
Score = 33.1 bits (72), Expect = 1.8
Identities = 19/45 (42%), Positives = 23/45 (51%), Gaps = 3/45 (6%)
Frame = +3
Query: 141 KHADKHNTDGDNDSGVDESTQGHDMNGS-PGSP--NKKIPSKLPT 266
KH H+ DG DSG + G D + S PGSP P +LPT
Sbjct: 349 KHVRTHSADGSEDSGEAGARGGSDTDHSPPGSPAAPPAAPERLPT 393
>UniRef50_Q17BH3 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 1044
Score = 33.1 bits (72), Expect = 1.8
Identities = 17/60 (28%), Positives = 33/60 (55%)
Frame = +3
Query: 93 NVDCIMSEVNESIAAGKHADKHNTDGDNDSGVDESTQGHDMNGSPGSPNKKIPSKLPTKE 272
N C + +NE+ ++G A + + DND DE + ++N SP S ++ + LP+++
Sbjct: 110 NSTCEVKYINENFSSGSSAPITSEEEDNDEEEDELNKVPELN-SPDSISEDLVHPLPSRQ 168
>UniRef50_UPI00015B5480 Cluster: PREDICTED: similar to
microtubule-associated tau protein; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to
microtubule-associated tau protein - Nasonia vitripennis
Length = 339
Score = 32.7 bits (71), Expect = 2.4
Identities = 19/41 (46%), Positives = 25/41 (60%), Gaps = 3/41 (7%)
Frame = +3
Query: 144 HADKHNTDGDNDSGVDES--TQGHDMNG-SPGSPNKKIPSK 257
H D +TD +NDSG+D S + ++ NG GSP K PSK
Sbjct: 89 HGDFSSTDAENDSGLDGSRRRRANEANGLQAGSPTKS-PSK 128
>UniRef50_Q90834 Cluster: ECH; n=4; Amniota|Rep: ECH - Gallus gallus
(Chicken)
Length = 582
Score = 31.9 bits (69), Expect = 4.2
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 105 IMSEVNESIAAGKHADKHNTDGDNDSGVDESTQGHDMNGSPGS 233
I N SIA+ +H+ + +T GD G +S + DM+ SPGS
Sbjct: 327 ISLNANSSIASPEHSVESSTCGDKTFGCSDS-EMEDMDSSPGS 368
>UniRef50_Q1F0A8 Cluster: Peptidil-prolyl cis-trans isomerase; n=1;
Clostridium oremlandii OhILAs|Rep: Peptidil-prolyl
cis-trans isomerase - Clostridium oremlandii OhILAs
Length = 249
Score = 31.9 bits (69), Expect = 4.2
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +3
Query: 42 RECLSLATQHILIKCYWNVDCIMSEVNESIAAGKHADKHNTDGDNDSGVD 191
+E S+ HIL++ + ++ E+NE ++ + A KH+T N G D
Sbjct: 112 KEPESMQASHILVESEEKANEVLKEINEGLSFEEAAKKHSTCPSNAQGGD 161
>UniRef50_Q24167 Cluster: Protein similar; n=7; Diptera|Rep: Protein
similar - Drosophila melanogaster (Fruit fly)
Length = 1507
Score = 31.9 bits (69), Expect = 4.2
Identities = 14/32 (43%), Positives = 23/32 (71%)
Frame = +3
Query: 159 NTDGDNDSGVDESTQGHDMNGSPGSPNKKIPS 254
+TD +DSG+DE++ M+G+ GSP K++ S
Sbjct: 1386 DTDASSDSGIDENSL---MDGASGSPRKRLSS 1414
>UniRef50_UPI00006CAFCC Cluster: hypothetical protein
TTHERM_00469070; n=1; Tetrahymena thermophila SB210|Rep:
hypothetical protein TTHERM_00469070 - Tetrahymena
thermophila SB210
Length = 1207
Score = 31.5 bits (68), Expect = 5.5
Identities = 19/48 (39%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = +3
Query: 138 GKHADKHNTDGDNDSGVDESTQGH-DMNG--SPGSPNKKIPSKLPTKE 272
GK++D + D D+D+ D+ G+ D NG + G PNK+ PS KE
Sbjct: 57 GKNSDGQDDDDDDDNEGDDKNDGNQDNNGDNNGGDPNKE-PSNSDLKE 103
>UniRef50_Q2GKW9 Cluster: Type IV secretion systemprotein, VirB6
family; n=1; Anaplasma phagocytophilum HZ|Rep: Type IV
secretion systemprotein, VirB6 family - Anaplasma
phagocytophilum (strain HZ)
Length = 1477
Score = 31.5 bits (68), Expect = 5.5
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +3
Query: 132 AAGKHADKHNT-DGDNDSGVDESTQGHDMNG 221
A G HA +H DGD +GVD S D+NG
Sbjct: 1429 ARGDHAREHRLEDGDTGAGVDNSDASADVNG 1459
>UniRef50_A5K6H1 Cluster: Putative uncharacterized protein; n=1;
Plasmodium vivax|Rep: Putative uncharacterized protein -
Plasmodium vivax
Length = 3077
Score = 31.5 bits (68), Expect = 5.5
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +3
Query: 114 EVNESIAAGKHADKHNTDGDNDSGVDESTQGHDMN 218
EV E + G HAD+H D D DE GHD +
Sbjct: 1027 EVEEHLHEGYHADEHE-DEDEHEDEDEHEDGHDQD 1060
>UniRef50_A7EW49 Cluster: Putative uncharacterized protein; n=1;
Sclerotinia sclerotiorum 1980|Rep: Putative
uncharacterized protein - Sclerotinia sclerotiorum 1980
Length = 201
Score = 31.5 bits (68), Expect = 5.5
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Frame = +3
Query: 141 KHADKHNTDGDNDSGVDESTQGH-DMNGSPGSPNKKIP 251
K AD+ +TDGD DSG +E +G +M+ +P K P
Sbjct: 146 KGADQEDTDGDEDSGDEEDEEGDVEMDEAPQLVRVKEP 183
>UniRef50_Q9VF63 Cluster: CG6118-PA; n=4; Diptera|Rep: CG6118-PA -
Drosophila melanogaster (Fruit fly)
Length = 943
Score = 31.1 bits (67), Expect = 7.3
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 135 AGKHADKHNTDGDNDSGVDESTQGHDMNGSPGSPN 239
AG D+ D +N+SG+D T ++ N PG N
Sbjct: 798 AGAGFDRKYDDNNNNSGLDMETDSNNNNSKPGGDN 832
>UniRef50_Q7RLD9 Cluster: Amine oxidase, flavin-containing,
putative; n=9; Plasmodium (Vinckeia)|Rep: Amine oxidase,
flavin-containing, putative - Plasmodium yoelii yoelii
Length = 4189
Score = 31.1 bits (67), Expect = 7.3
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 138 GKHADKHNTDGDNDSGVDESTQGHDMNGSPGSPNKK 245
G + D +N DG+N+ G + +D N S G N K
Sbjct: 330 GNNNDGNNNDGNNNDGKNNDGNNNDGNNSNGDDNNK 365
>UniRef50_Q54IS9 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 1916
Score = 31.1 bits (67), Expect = 7.3
Identities = 17/52 (32%), Positives = 29/52 (55%)
Frame = +3
Query: 117 VNESIAAGKHADKHNTDGDNDSGVDESTQGHDMNGSPGSPNKKIPSKLPTKE 272
+++ ++ G H D N D D + VD+S +D NG GS ++ S LP ++
Sbjct: 585 LSKQLSKGVHFDSCNLD-DLEWRVDDSNANNDNNGGGGSNQERSFSLLPLQK 635
>UniRef50_A6R1J6 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 455
Score = 31.1 bits (67), Expect = 7.3
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = -3
Query: 376 GTFFFSIDGGFSGVLAVALLLEDRERLAFKLLLDFSFVGNLLGIFLFGDPGDPFI 212
G+FF S++ S V L ER+ F+ L + S++GN I P DP +
Sbjct: 43 GSFFRSLECNVSSSKEVVKLAPFVERVGFQTLTESSYLGNTPQINNMASPIDPML 97
>UniRef50_A0RZ95 Cluster: Putative uncharacterized protein; n=5;
Cenarchaeum symbiosum|Rep: Putative uncharacterized
protein - Cenarchaeum symbiosum
Length = 1846
Score = 31.1 bits (67), Expect = 7.3
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +3
Query: 114 EVNESIAAGKH-ADKHNTDGDNDSGVDESTQGH-DMNGSPGSP 236
E N +I ++ ++ N+DGD+D G+D ++ G DM+ P P
Sbjct: 1191 EDNIAITTNRNDGNRDNSDGDDDDGIDFNSDGTVDMDNGPHGP 1233
>UniRef50_UPI00015B440F Cluster: PREDICTED: similar to protease,
reverse transcriptase, ribonuclease H, integrase; n=3;
Nasonia vitripennis|Rep: PREDICTED: similar to protease,
reverse transcriptase, ribonuclease H, integrase -
Nasonia vitripennis
Length = 2237
Score = 30.7 bits (66), Expect = 9.6
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 3/47 (6%)
Frame = +3
Query: 141 KHADKHNTDGDNDSGVDESTQGHDMNGSPG-SPNKKI--PSKLPTKE 272
K + ++D + DS DES + NG+ G +P K I SK PT+E
Sbjct: 329 KKSSDSSSDSEEDSSSDESEKEESKNGALGKTPTKAIDTKSKQPTRE 375
>UniRef50_UPI0000D56B1D Cluster: PREDICTED: similar to CG1845-PA;
n=1; Tribolium castaneum|Rep: PREDICTED: similar to
CG1845-PA - Tribolium castaneum
Length = 1031
Score = 30.7 bits (66), Expect = 9.6
Identities = 17/64 (26%), Positives = 29/64 (45%)
Frame = +3
Query: 54 SLATQHILIKCYWNVDCIMSEVNESIAAGKHADKHNTDGDNDSGVDESTQGHDMNGSPGS 233
S A +H L + V + SE+N++ + D +DG+N+ G D SP
Sbjct: 726 SQALKHGLARAK-RVKVVRSELNKARKNLANTDSSQSDGENEGGGDSKNSSQSSGVSPSG 784
Query: 234 PNKK 245
N++
Sbjct: 785 VNRR 788
>UniRef50_Q0A742 Cluster: Na+/solute symporter; n=2; Alkalilimnicola
ehrlichei MLHE-1|Rep: Na+/solute symporter -
Alkalilimnicola ehrlichei (strain MLHE-1)
Length = 724
Score = 30.7 bits (66), Expect = 9.6
Identities = 10/19 (52%), Positives = 14/19 (73%)
Frame = -3
Query: 262 GNLLGIFLFGDPGDPFISW 206
GN++G +LFG+P DP W
Sbjct: 643 GNIIGTYLFGNPSDPSTWW 661
>UniRef50_A3ZT17 Cluster: Putative large multi-functional protein;
n=1; Blastopirellula marina DSM 3645|Rep: Putative large
multi-functional protein - Blastopirellula marina DSM
3645
Length = 1397
Score = 30.7 bits (66), Expect = 9.6
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 90 WNVDCIMSEVNESIAAGKHADKHN-TDGDNDSGVDESTQGHDMNGSPGSPNK 242
W VD +MS NES A+ + +N GD ++ DM G+ G P+K
Sbjct: 214 WIVDRLMSAANESDASTRKMPHYNLPQGDAEAIAAYLVAESDMVGAKGKPDK 265
>UniRef50_A1W0J4 Cluster: DedA family protein; n=12;
Campylobacter|Rep: DedA family protein - Campylobacter
jejuni subsp. jejuni serotype O:23/36 (strain 81-176)
Length = 185
Score = 30.7 bits (66), Expect = 9.6
Identities = 15/49 (30%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Frame = -3
Query: 370 FFFSIDGGFSGVLAVALLLEDRERLAFKLLLDFSFVGNLLG---IFLFG 233
FF+S+ GG G+LA A +L + ++ + +F+ N +G +F+ G
Sbjct: 17 FFYSLGGGMVGILA-AGVLSSQGKMDLSFCITLAFIANTIGSTLLFILG 64
>UniRef50_Q9VWS3 Cluster: CG6606-PA; n=4; Sophophora|Rep: CG6606-PA
- Drosophila melanogaster (Fruit fly)
Length = 832
Score = 30.7 bits (66), Expect = 9.6
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 4/48 (8%)
Frame = +3
Query: 138 GKHADKHNTDGDNDSGVDESTQ----GHDMNGSPGSPNKKIPSKLPTK 269
G DK+N D D++S +ST+ GH+ +GS +I ++L K
Sbjct: 706 GNKRDKYNNDNDSNSPSPKSTERIIIGHEKSGSHADRRSEISAQLAKK 753
>UniRef50_Q95QG2 Cluster: Temporarily assigned gene name protein
153, isoform b; n=3; Caenorhabditis|Rep: Temporarily
assigned gene name protein 153, isoform b -
Caenorhabditis elegans
Length = 733
Score = 30.7 bits (66), Expect = 9.6
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 138 GKHADKHNTDGDNDSGVDESTQGHDMNGSPGSPNKKIPS 254
GKH D DSGV +++GH NGS GS + + S
Sbjct: 142 GKHGQGDLASTD-DSGVSSASRGHTPNGSTGSRHVRAAS 179
>UniRef50_Q8I452 Cluster: Putative uncharacterized protein PFE0245c;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFE0245c - Plasmodium falciparum
(isolate 3D7)
Length = 2961
Score = 30.7 bits (66), Expect = 9.6
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = +3
Query: 114 EVNESIAAGKHADKHNTDGDNDSGVDESTQGHDMNGS 224
E N+ + D + DGD D+G DE G+D +G+
Sbjct: 1993 EDNDDNDGDEDEDNDDNDGDEDNGGDEDNDGNDDDGN 2029
>UniRef50_Q8I2W6 Cluster: Putative uncharacterized protein PFI0915w;
n=1; Plasmodium falciparum 3D7|Rep: Putative
uncharacterized protein PFI0915w - Plasmodium falciparum
(isolate 3D7)
Length = 737
Score = 30.7 bits (66), Expect = 9.6
Identities = 13/47 (27%), Positives = 22/47 (46%)
Frame = +3
Query: 120 NESIAAGKHADKHNTDGDNDSGVDESTQGHDMNGSPGSPNKKIPSKL 260
NE+ H + HN D +ND+ + + H+ N + N + KL
Sbjct: 132 NENNNNNDHNNDHNNDHNNDNNNNNNNNDHNNNSDNSNDNNNVNHKL 178
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 341,981,365
Number of Sequences: 1657284
Number of extensions: 5908942
Number of successful extensions: 18882
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 17913
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18823
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 14868845845
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -