BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_C07
(381 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z98265-1|CAB44310.1| 797|Homo sapiens plakophilin 3 protein. 29 6.6
BC109276-1|AAI09277.1| 709|Homo sapiens F-box protein 40 protein. 29 6.6
BC109275-1|AAI09276.1| 709|Homo sapiens F-box protein 40 protein. 29 6.6
BC032666-1|AAH32666.1| 660|Homo sapiens OGFR protein protein. 29 6.6
BC014137-1|AAH14137.1| 657|Homo sapiens OGFR protein protein. 29 6.6
BC008768-1|AAH08768.1| 513|Homo sapiens OGFR protein protein. 29 6.6
BC000081-1|AAH00081.1| 797|Homo sapiens plakophilin 3 protein. 29 6.6
AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein. 29 6.6
AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein. 29 6.6
AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein. 29 6.6
AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein. 29 6.6
AL096710-5|CAI22046.1| 3060|Homo sapiens dystonin protein. 29 6.6
AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein. 29 6.6
AL035669-9|CAC28882.1| 625|Homo sapiens opioid growth factor re... 29 6.6
AL035669-6|CAI95763.1| 677|Homo sapiens opioid growth factor re... 29 6.6
AK223511-1|BAD97231.1| 797|Homo sapiens plakophilin 3 variant p... 29 6.6
AK024485-1|BAB15775.1| 641|Homo sapiens FLJ00084 protein protein. 29 6.6
AF400227-1|AAL62062.1| 3060|Homo sapiens bullous pemphigoid anti... 29 6.6
AF204674-1|AAF17085.1| 709|Homo sapiens muscle disease-related ... 29 6.6
AF172453-1|AAF64406.1| 697|Homo sapiens opioid growth factor re... 29 6.6
AF172452-1|AAF64405.1| 657|Homo sapiens opioid growth factor re... 29 6.6
AF172451-1|AAF64404.1| 677|Homo sapiens opioid growth factor re... 29 6.6
AF112980-1|AAD03745.1| 618|Homo sapiens 7-60 protein. 29 6.6
AF109134-1|AAD03737.1| 618|Homo sapiens 7-60 protein. 29 6.6
AF053719-1|AAF23050.1| 797|Homo sapiens plakophilin-3 protein p... 29 6.6
AB033021-1|BAA86509.1| 717|Homo sapiens KIAA1195 protein protein. 29 6.6
>Z98265-1|CAB44310.1| 797|Homo sapiens plakophilin 3 protein.
Length = 797
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 54 SLATQHILIKCYWNVDCIMSEVNESIAAGKHADK 155
S AT+ + +C+ VD +++ +N ++ AGK DK
Sbjct: 489 SQATRQKMRECHGLVDALVTSINHALDAGKCEDK 522
>BC109276-1|AAI09277.1| 709|Homo sapiens F-box protein 40 protein.
Length = 709
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +3
Query: 42 RECLSLATQHILIKCYWNVDCIMSEVNESIAAGKHADKHNTDGDNDSGVDESTQGHDMNG 221
RE L+ + + + + + I S+ + + A + + NDS ++ + GH+M
Sbjct: 200 REVLAKTKEGMDLVKFGQWENIFSKEHAASALTNSSASCESKNKNDSEKEQISSGHNMVE 259
Query: 222 SPGSPNKKIPSK 257
G+P KK P +
Sbjct: 260 GEGAPKKKEPQE 271
>BC109275-1|AAI09276.1| 709|Homo sapiens F-box protein 40 protein.
Length = 709
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +3
Query: 42 RECLSLATQHILIKCYWNVDCIMSEVNESIAAGKHADKHNTDGDNDSGVDESTQGHDMNG 221
RE L+ + + + + + I S+ + + A + + NDS ++ + GH+M
Sbjct: 200 REVLAKTKEGMDLVKFGQWENIFSKEHAASALTNSSASCESKNKNDSEKEQISSGHNMVE 259
Query: 222 SPGSPNKKIPSK 257
G+P KK P +
Sbjct: 260 GEGAPKKKEPQE 271
>BC032666-1|AAH32666.1| 660|Homo sapiens OGFR protein protein.
Length = 660
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SIAAGKHADKHNTDGDNDSGVDESTQGH--DMNGSPGSPNK 242
++A H G +++GV+E T+G G+PGSP++
Sbjct: 463 ALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE 503
>BC014137-1|AAH14137.1| 657|Homo sapiens OGFR protein protein.
Length = 657
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SIAAGKHADKHNTDGDNDSGVDESTQGH--DMNGSPGSPNK 242
++A H G +++GV+E T+G G+PGSP++
Sbjct: 480 ALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE 520
>BC008768-1|AAH08768.1| 513|Homo sapiens OGFR protein protein.
Length = 513
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SIAAGKHADKHNTDGDNDSGVDESTQGH--DMNGSPGSPNK 242
++A H G +++GV+E T+G G+PGSP++
Sbjct: 336 ALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE 376
>BC000081-1|AAH00081.1| 797|Homo sapiens plakophilin 3 protein.
Length = 797
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 54 SLATQHILIKCYWNVDCIMSEVNESIAAGKHADK 155
S AT+ + +C+ VD +++ +N ++ AGK DK
Sbjct: 489 SQATRQKMRECHGLVDALVTSINHALDAGKCEDK 522
>AL590005-2|CAI14989.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 150 DKHNTDGDNDSGVDESTQG-HDMNGSPGSPN 239
D ++ D D+D G+DE G D NG P N
Sbjct: 2589 DSNDQDDDDDDGIDEEGGGIRDENGKPRCQN 2619
>AL512448-1|CAI16609.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 150 DKHNTDGDNDSGVDESTQG-HDMNGSPGSPN 239
D ++ D D+D G+DE G D NG P N
Sbjct: 2589 DSNDQDDDDDDGIDEEGGGIRDENGKPRCQN 2619
>AL512422-2|CAI14341.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 150 DKHNTDGDNDSGVDESTQG-HDMNGSPGSPN 239
D ++ D D+D G+DE G D NG P N
Sbjct: 2589 DSNDQDDDDDDGIDEEGGGIRDENGKPRCQN 2619
>AL137008-2|CAI20330.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 150 DKHNTDGDNDSGVDESTQG-HDMNGSPGSPN 239
D ++ D D+D G+DE G D NG P N
Sbjct: 2589 DSNDQDDDDDDGIDEEGGGIRDENGKPRCQN 2619
>AL096710-5|CAI22046.1| 3060|Homo sapiens dystonin protein.
Length = 3060
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 150 DKHNTDGDNDSGVDESTQG-HDMNGSPGSPN 239
D ++ D D+D G+DE G D NG P N
Sbjct: 2263 DSNDQDDDDDDGIDEEGGGIRDENGKPRCQN 2293
>AL096710-2|CAI22044.1| 7543|Homo sapiens dystonin protein.
Length = 7543
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 150 DKHNTDGDNDSGVDESTQG-HDMNGSPGSPN 239
D ++ D D+D G+DE G D NG P N
Sbjct: 2589 DSNDQDDDDDDGIDEEGGGIRDENGKPRCQN 2619
>AL035669-9|CAC28882.1| 625|Homo sapiens opioid growth factor
receptor protein.
Length = 625
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SIAAGKHADKHNTDGDNDSGVDESTQGH--DMNGSPGSPNK 242
++A H G +++GV+E T+G G+PGSP++
Sbjct: 428 ALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE 468
>AL035669-6|CAI95763.1| 677|Homo sapiens opioid growth factor
receptor protein.
Length = 677
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SIAAGKHADKHNTDGDNDSGVDESTQGH--DMNGSPGSPNK 242
++A H G +++GV+E T+G G+PGSP++
Sbjct: 480 ALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE 520
>AK223511-1|BAD97231.1| 797|Homo sapiens plakophilin 3 variant
protein.
Length = 797
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 54 SLATQHILIKCYWNVDCIMSEVNESIAAGKHADK 155
S AT+ + +C+ VD +++ +N ++ AGK DK
Sbjct: 489 SQATRQKMRECHGLVDALVTSINHALDAGKCEDK 522
>AK024485-1|BAB15775.1| 641|Homo sapiens FLJ00084 protein protein.
Length = 641
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SIAAGKHADKHNTDGDNDSGVDESTQGH--DMNGSPGSPNK 242
++A H G +++GV+E T+G G+PGSP++
Sbjct: 444 ALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE 484
>AF400227-1|AAL62062.1| 3060|Homo sapiens bullous pemphigoid antigen 1
eB protein.
Length = 3060
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/31 (41%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = +3
Query: 150 DKHNTDGDNDSGVDESTQG-HDMNGSPGSPN 239
D ++ D D+D G+DE G D NG P N
Sbjct: 2263 DSNDQDDDDDDGIDEEGGGIRDENGKPRCQN 2293
>AF204674-1|AAF17085.1| 709|Homo sapiens muscle disease-related
protein protein.
Length = 709
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +3
Query: 42 RECLSLATQHILIKCYWNVDCIMSEVNESIAAGKHADKHNTDGDNDSGVDESTQGHDMNG 221
RE L+ + + + + + I S+ + + A + + NDS ++ + GH+M
Sbjct: 200 REVLAKTKEGMDLVKFGQWENIFSKEHAASALTNSSASCESKNKNDSEKEQISSGHNMVE 259
Query: 222 SPGSPNKKIPSK 257
G+P KK P +
Sbjct: 260 GEGAPKKKEPQE 271
>AF172453-1|AAF64406.1| 697|Homo sapiens opioid growth factor
receptor protein.
Length = 697
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SIAAGKHADKHNTDGDNDSGVDESTQGH--DMNGSPGSPNK 242
++A H G +++GV+E T+G G+PGSP++
Sbjct: 480 ALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE 520
>AF172452-1|AAF64405.1| 657|Homo sapiens opioid growth factor
receptor protein.
Length = 657
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SIAAGKHADKHNTDGDNDSGVDESTQGH--DMNGSPGSPNK 242
++A H G +++GV+E T+G G+PGSP++
Sbjct: 480 ALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE 520
>AF172451-1|AAF64404.1| 677|Homo sapiens opioid growth factor
receptor protein.
Length = 677
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SIAAGKHADKHNTDGDNDSGVDESTQGH--DMNGSPGSPNK 242
++A H G +++GV+E T+G G+PGSP++
Sbjct: 480 ALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE 520
>AF112980-1|AAD03745.1| 618|Homo sapiens 7-60 protein.
Length = 618
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SIAAGKHADKHNTDGDNDSGVDESTQGH--DMNGSPGSPNK 242
++A H G +++GV+E T+G G+PGSP++
Sbjct: 421 ALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE 461
>AF109134-1|AAD03737.1| 618|Homo sapiens 7-60 protein.
Length = 618
Score = 28.7 bits (61), Expect = 6.6
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +3
Query: 126 SIAAGKHADKHNTDGDNDSGVDESTQGH--DMNGSPGSPNK 242
++A H G +++GV+E T+G G+PGSP++
Sbjct: 421 ALAGSPAPSGHPKAGHSENGVEEDTEGRTGPKEGTPGSPSE 461
>AF053719-1|AAF23050.1| 797|Homo sapiens plakophilin-3 protein
protein.
Length = 797
Score = 28.7 bits (61), Expect = 6.6
Identities = 12/34 (35%), Positives = 22/34 (64%)
Frame = +3
Query: 54 SLATQHILIKCYWNVDCIMSEVNESIAAGKHADK 155
S AT+ + +C+ VD +++ +N ++ AGK DK
Sbjct: 489 SQATRQKMRECHGLVDALVTSINHALDAGKCEDK 522
>AB033021-1|BAA86509.1| 717|Homo sapiens KIAA1195 protein protein.
Length = 717
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/72 (23%), Positives = 34/72 (47%)
Frame = +3
Query: 42 RECLSLATQHILIKCYWNVDCIMSEVNESIAAGKHADKHNTDGDNDSGVDESTQGHDMNG 221
RE L+ + + + + + I S+ + + A + + NDS ++ + GH+M
Sbjct: 208 REVLAKTKEGMDLVKFGQWENIFSKEHAASALTNSSASCESKNKNDSEKEQISSGHNMVE 267
Query: 222 SPGSPNKKIPSK 257
G+P KK P +
Sbjct: 268 GEGAPKKKEPQE 279
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 50,946,719
Number of Sequences: 237096
Number of extensions: 962879
Number of successful extensions: 2067
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2067
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2526356360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -