Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C07
         (381 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       22   2.8  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              21   3.7  
Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1 p...    21   4.9  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   6.5  
AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropi...    21   6.5  
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    20   8.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          20   8.5  

>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.8 bits (44), Expect = 2.8
 Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
 Frame = +3

Query: 111 SEVNESIAAGKHADKHNTDGDNDSGVDES-TQGHDMNGSPGSPNKKIPSKL 260
           S+   S A G     H +      G   + +QG    G PG+P  + PS++
Sbjct: 13  SQQPSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQM 63


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 21.4 bits (43), Expect = 3.7
 Identities = 9/24 (37%), Positives = 13/24 (54%)
 Frame = +3

Query: 177 DSGVDESTQGHDMNGSPGSPNKKI 248
           DSG+DE  +    NG     N+K+
Sbjct: 36  DSGIDEKKEDDFRNGIIDVENEKV 59


>Y13429-1|CAA73841.1|  402|Apis mellifera dopamine receptor, D1
           protein.
          Length = 402

 Score = 21.0 bits (42), Expect = 4.9
 Identities = 8/18 (44%), Positives = 14/18 (77%)
 Frame = -3

Query: 286 LLLDFSFVGNLLGIFLFG 233
           L++ F+ V +LLG ++FG
Sbjct: 77  LVMTFAGVNDLLGYWVFG 94


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 7/32 (21%), Positives = 18/32 (56%)
 Frame = -2

Query: 194 FIDSTVIISICVMFIRVFSRSN*FIYFRHYAI 99
           F+++ +  S C +F+ +F  ++    F H+ +
Sbjct: 278 FVNNILAASACSLFVVIFHFAHPREEFNHWTV 309


>AJ780964-1|CAG62942.2|  332|Apis mellifera putative corticotropin
           releasing hormone-binding protein protein.
          Length = 332

 Score = 20.6 bits (41), Expect = 6.5
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = -3

Query: 292 FKLLLDFSFVGNLLGIFLFGDPGD 221
           FKL+ D  FV +  G FL+    D
Sbjct: 64  FKLVTDCIFVTSEPGYFLYTSKND 87


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 362 FN*WWILWCFS 330
           FN WW++  FS
Sbjct: 3   FNIWWLILYFS 13


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.2 bits (40), Expect = 8.5
 Identities = 7/24 (29%), Positives = 13/24 (54%)
 Frame = +3

Query: 150 DKHNTDGDNDSGVDESTQGHDMNG 221
           + +N +G ND+G       ++ NG
Sbjct: 247 NNNNNNGANDNGNGNGASNNNNNG 270


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,297
Number of Sequences: 438
Number of extensions: 1775
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 51
effective length of database: 124,005
effective search space used:  9300375
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)