Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_C06
(632 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical p... 192 2e-49
AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical ... 33 0.17
Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical pr... 31 0.91
Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z75544-2|CAC42316.1| 480|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z75544-1|CAA99881.1| 476|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z82265-1|CAB05172.1| 116|Caenorhabditis elegans Hypothetical pr... 28 6.4
AF014939-2|ABA00177.1| 537|Caenorhabditis elegans Hypothetical ... 28 6.4
AF014939-1|AAB63926.1| 578|Caenorhabditis elegans Hypothetical ... 28 6.4
U23168-12|AAC38812.2| 443|Caenorhabditis elegans Hypothetical p... 27 8.4
AF067936-5|AAC19211.1| 430|Caenorhabditis elegans Hypothetical ... 27 8.4
AF067936-4|AAC19210.1| 903|Caenorhabditis elegans Hypothetical ... 27 8.4
>U23139-15|AAK31488.1| 387|Caenorhabditis elegans Hypothetical
protein F13H8.7 protein.
Length = 387
Score = 192 bits (468), Expect = 2e-49
Identities = 95/197 (48%), Positives = 123/197 (62%)
Frame = +2
Query: 41 LEAIVNNNLSGKDLEEFNRIYYGRKDHFEIKLKDTSXXXXXXXXXXXXXXXFPAKKEQTR 220
+E + L G L+E RI YGR + +++ + A+KEQTR
Sbjct: 11 VETALAEKLDGVSLDEVERILYGRP-YRALEISSIAEKLAQDGDFQLSGYIVDAQKEQTR 69
Query: 221 PPRIVKVGIIQHSIAIPTDRPINEQKKAIFDKVKKIIDVAGQEGVNIICFQELWNMPFAF 400
PR+V+V IQ+ I PT + EQ+ AI +V +I+ A G N+I QE W MPFAF
Sbjct: 70 APRLVRVAAIQNKIHRPTTDSVVEQRDAIHQRVGAMIEAAASAGANVIGLQEAWTMPFAF 129
Query: 401 CTREKQPWCEFAESAEEGPTTRFLRELAVKYAMVIVSSILERDEKHADFLWNTTVIISDT 580
CTRE+ PW EFAES GPTT+FL +LAVK+ +VI+S ILERDE+ D +WNT V+IS T
Sbjct: 130 CTRERLPWTEFAESVYTGPTTQFLSKLAVKHDIVIISPILERDEEKDDVIWNTAVVISHT 189
Query: 581 GNVIGKHRKNHIPRVGD 631
G VIG+ RKNHIPRVGD
Sbjct: 190 GRVIGRSRKNHIPRVGD 206
>AF022981-4|AAG24205.1| 602|Caenorhabditis elegans Hypothetical
protein W03F9.10 protein.
Length = 602
Score = 33.1 bits (72), Expect = 0.17
Identities = 25/89 (28%), Positives = 35/89 (39%)
Frame = +2
Query: 56 NNNLSGKDLEEFNRIYYGRKDHFEIKLKDTSXXXXXXXXXXXXXXXFPAKKEQTRPPRIV 235
N NLS K+L+E R K K K++ P K+E+ V
Sbjct: 14 NKNLSKKELQELKR-----KQQKSKKKKESKKRAKATKQAEIETREEPKKEEENGDDLDV 68
Query: 236 KVGIIQHSIAIPTDRPINEQKKAIFDKVK 322
++ I +I I D P + AIFD K
Sbjct: 69 EIDYIGETIEIEPDNPHAQYFSAIFDAFK 97
>Z73098-4|CAD44145.1| 565|Caenorhabditis elegans Hypothetical
protein T21C9.3b protein.
Length = 565
Score = 30.7 bits (66), Expect = 0.91
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 299 KAIFDKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 433
K +FD ++ D + +NI+ F E MP FC +Q W F
Sbjct: 46 KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90
>Z73098-3|CAD44144.1| 501|Caenorhabditis elegans Hypothetical
protein T21C9.3a protein.
Length = 501
Score = 30.7 bits (66), Expect = 0.91
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +2
Query: 299 KAIFDKVKKIIDVAGQEGVNIICFQELWNMP-FAFCTREKQPWCEF 433
K +FD ++ D + +NI+ F E MP FC +Q W F
Sbjct: 46 KDVFDLFEEYFDYPKESDINIV-FNESMTMPNVTFCMSRQQAWSHF 90
>Z92828-1|CAB07337.1| 512|Caenorhabditis elegans Hypothetical
protein C37A5.1 protein.
Length = 512
Score = 29.9 bits (64), Expect = 1.6
Identities = 10/33 (30%), Positives = 21/33 (63%)
Frame = -3
Query: 603 RCFPITFPVSLIITVVFQRKSACFSSLSRIEDT 505
+C P+TF ++ +T++ R F+++ IE+T
Sbjct: 75 KCVPLTFMLAFFVTIIVDRWKNMFANIGFIENT 107
>Z75544-2|CAC42316.1| 480|Caenorhabditis elegans Hypothetical
protein K02A11.1b protein.
Length = 480
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 326 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEEGPTTRFLREL--AVKYAM 499
I+ + Q G N++ NMP+ C E+ +E A G T ++ E+ A + AM
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEMRGAPEKAM 197
Query: 500 VIVSSILERDEKHAD 544
+ +L + + D
Sbjct: 198 LDDMKMLHQQGRELD 212
>Z75544-1|CAA99881.1| 476|Caenorhabditis elegans Hypothetical
protein K02A11.1a protein.
Length = 476
Score = 28.7 bits (61), Expect = 3.7
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 2/75 (2%)
Frame = +2
Query: 326 IIDVAGQEGVNIICFQELWNMPFAFCTREKQPWCEFAESAEEGPTTRFLREL--AVKYAM 499
I+ + Q G N++ NMP+ C E+ +E A G T ++ E+ A + AM
Sbjct: 138 IVKILIQAGANLLAVNAEGNMPYDICDHEETLDVIESEMAARGITQSYIDEMRGAPEKAM 197
Query: 500 VIVSSILERDEKHAD 544
+ +L + + D
Sbjct: 198 LDDMKMLHQQGRELD 212
>Z82265-1|CAB05172.1| 116|Caenorhabditis elegans Hypothetical
protein F02H6.3a protein.
Length = 116
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/25 (52%), Positives = 16/25 (64%), Gaps = 2/25 (8%)
Frame = -1
Query: 71 HLSCC*RSLQGFGFRGP--CLLVCY 3
+L CC RSL+ FRGP CL+ Y
Sbjct: 92 YLKCCLRSLKKIKFRGPLNCLVQTY 116
>AF014939-2|ABA00177.1| 537|Caenorhabditis elegans Hypothetical
protein ZC132.3b protein.
Length = 537
Score = 27.9 bits (59), Expect = 6.4
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = -3
Query: 609 FLRCFPITFPVSLIITVVFQRKSACFSSLSRIEDTITMAYLTASSRRKRVVGPSSADSAN 430
FL + + + LII ++F +KS C S ++ +++ Y T + R VV + +
Sbjct: 36 FLGLLVVFYGLILIIHMIFSKKSECEEDQSSLKPLLSI-YRTITKRIFTVVHGITLVNGL 94
Query: 429 SHQGCFSRVQKAKGMFHSSW---KQIILTPS*PATSIIFFTLSKIAFFCSLIGRSVGIAI 259
SH F+ +++ W I + I FF++S+ F SL SV +
Sbjct: 95 SH--FFNVGWLVTVLWYPMWIALYSIKVFTEMYLIVISFFSISRCFVFFSLAKPSVELTQ 152
Query: 258 EC 253
+C
Sbjct: 153 DC 154
>AF014939-1|AAB63926.1| 578|Caenorhabditis elegans Hypothetical
protein ZC132.3a protein.
Length = 578
Score = 27.9 bits (59), Expect = 6.4
Identities = 30/122 (24%), Positives = 54/122 (44%), Gaps = 3/122 (2%)
Frame = -3
Query: 609 FLRCFPITFPVSLIITVVFQRKSACFSSLSRIEDTITMAYLTASSRRKRVVGPSSADSAN 430
FL + + + LII ++F +KS C S ++ +++ Y T + R VV + +
Sbjct: 36 FLGLLVVFYGLILIIHMIFSKKSECEEDQSSLKPLLSI-YRTITKRIFTVVHGITLVNGL 94
Query: 429 SHQGCFSRVQKAKGMFHSSW---KQIILTPS*PATSIIFFTLSKIAFFCSLIGRSVGIAI 259
SH F+ +++ W I + I FF++S+ F SL SV +
Sbjct: 95 SH--FFNVGWLVTVLWYPMWIALYSIKVFTEMYLIVISFFSISRCFVFFSLAKPSVELTQ 152
Query: 258 EC 253
+C
Sbjct: 153 DC 154
>U23168-12|AAC38812.2| 443|Caenorhabditis elegans Hypothetical
protein B0228.9 protein.
Length = 443
Score = 27.5 bits (58), Expect = 8.4
Identities = 12/41 (29%), Positives = 24/41 (58%)
Frame = +2
Query: 467 FLRELAVKYAMVIVSSILERDEKHADFLWNTTVIISDTGNV 589
++ ++ +YA +VS + R+ HADF +TT ++S +
Sbjct: 357 YMNKVVARYAKCVVSEVRIRNLVHADF--STTFLLSRANEI 395
>AF067936-5|AAC19211.1| 430|Caenorhabditis elegans Hypothetical
protein C24G6.2b protein.
Length = 430
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 401 CTREKQPWCEFAESAEEGPTTRFLRELAVKYAM 499
C E +P C E + G +FLRE KY M
Sbjct: 154 CVTESEPLCLVVEYCDNGDLLKFLRE-RCKYMM 185
>AF067936-4|AAC19210.1| 903|Caenorhabditis elegans Hypothetical
protein C24G6.2a protein.
Length = 903
Score = 27.5 bits (58), Expect = 8.4
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +2
Query: 401 CTREKQPWCEFAESAEEGPTTRFLRELAVKYAM 499
C E +P C E + G +FLRE KY M
Sbjct: 627 CVTESEPLCLVVEYCDNGDLLKFLRE-RCKYMM 658
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,125,353
Number of Sequences: 27780
Number of extensions: 324886
Number of successful extensions: 893
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 893
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1395683256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -