Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C05
         (409 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   1.3  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   1.3  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   2.3  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   4.1  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   7.1  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    20   9.4  

>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 164 LNISSVPWDHVEARARRCSGGVSAGKRHHRCN 69
           ++I+   +D +    R CSG +S  K    CN
Sbjct: 43  VHITKDEYDEIGRLKRTCSGDISVTKCEGFCN 74


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 1.3
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 164 LNISSVPWDHVEARARRCSGGVSAGKRHHRCN 69
           ++I+   +D +    R CSG +S  K    CN
Sbjct: 43  VHITKDEYDEIGRLKRTCSGDISVTKCEGFCN 74


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +1

Query: 220 IPLTWLSAAKHPKTKWP 270
           IP+T  +  KH KTK P
Sbjct: 210 IPVTLTTVPKHSKTKSP 226


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 4.1
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 197 SCSDGVRRWYCLNI 156
           SCSD + RW  L +
Sbjct: 434 SCSDKIARWNVLGV 447


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 20.6 bits (41), Expect = 7.1
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 228 DVVISGKTPEDKMAGILLEARQGDKIVGTWTVS 326
           D+ ISGK  + +M   L+     D+ V TW V+
Sbjct: 99  DLPISGKPFQIRMKHGLIRDLIVDRDVPTWEVN 131


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 20.2 bits (40), Expect = 9.4
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -2

Query: 312 CRRSCHPDELPGGCR 268
           CR+   PDE    CR
Sbjct: 629 CRQGTVPDETHSACR 643


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,927
Number of Sequences: 438
Number of extensions: 2471
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10256061
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)