Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C04
         (444 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   2.3  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   4.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    21   6.9  
AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head orthol...    20   9.2  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 2.3
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = +2

Query: 197  WNKSQDGNRPEWIPIQ 244
            WN     N PEW P +
Sbjct: 1358 WNPGSTTNYPEWQPTE 1373


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 4.0
 Identities = 9/34 (26%), Positives = 16/34 (47%)
 Frame = +2

Query: 185 DKNGWNKSQDGNRPEWIPIQNGYRIQYPLDNNYN 286
           D N  N  ++GN  ++  I  G  + Y +   Y+
Sbjct: 460 DSNNNNNKEEGNSCQYCNIAFGDAVLYTIHMGYH 493


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 20.6 bits (41), Expect = 6.9
 Identities = 10/19 (52%), Positives = 10/19 (52%)
 Frame = -2

Query: 443 RGCILVLKCNSPRISQLFV 387
           RG   VLKCN P     FV
Sbjct: 136 RGNTAVLKCNIPSFVADFV 154


>AF217810-1|AAF71998.1|  431|Tribolium castaneum fork head
           orthologue protein.
          Length = 431

 Score = 20.2 bits (40), Expect = 9.2
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 281 NCCPKGIEFGN 249
           NC P+G  FG+
Sbjct: 41  NCSPQGASFGS 51


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,986
Number of Sequences: 336
Number of extensions: 2481
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used:  9985735
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)