Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C03
         (391 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   4.3  
AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    21   5.7  
AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate neu...    20   10.0 

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 7/12 (58%), Positives = 8/12 (66%)
 Frame = +3

Query: 201 YTEVCTCTCPDG 236
           Y +  TCTCP G
Sbjct: 3   YVDSYTCTCPLG 14


>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 20.6 bits (41), Expect = 5.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 66  VALTYVNGNKVKSYICQGY 122
           + L +  G  +KS+  QGY
Sbjct: 79  IILVFSKGKVIKSFFNQGY 97


>AY695257-1|AAW21974.1|  224|Tribolium castaneum intermediate
           neuroblasts defectiveprotein protein.
          Length = 224

 Score = 19.8 bits (39), Expect = 10.0
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +2

Query: 122 LRLREMLCSPWFRLREVK 175
           LRL E     WF+ R VK
Sbjct: 154 LRLSEKQVKIWFQNRRVK 171


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,613
Number of Sequences: 336
Number of extensions: 1989
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 122,585
effective HSP length: 51
effective length of database: 105,449
effective search space used:  8225022
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.8 bits)