Samia BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C03
         (391 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

01_01_0773 + 6002563-6003069,6003183-6003299,6003447-6003539           28   3.0  
07_03_0909 + 22512313-22512474,22513151-22513465,22513539-225166...    27   4.0  
11_01_0308 + 2307623-2307697,2308554-2308790,2310109-2310282           27   5.3  
02_03_0415 + 18805541-18805610,18805962-18806128,18806616-188066...    27   7.0  
09_02_0338 + 7426999-7428322,7428390-7428646                           26   9.2  
04_04_1268 - 32262994-32263017,32263411-32263488,32263653-322638...    26   9.2  
03_02_0752 - 10922456-10922644,10922719-10922796,10922888-109230...    26   9.2  

>01_01_0773 + 6002563-6003069,6003183-6003299,6003447-6003539
          Length = 238

 Score = 27.9 bits (59), Expect = 3.0
 Identities = 13/38 (34%), Positives = 19/38 (50%)
 Frame = -2

Query: 240 RLRLDRYRCRPQCNFRTRTARILTSRSRNQGEHSISRN 127
           R R+ R R  P+C +R  TAR   + ++   EH    N
Sbjct: 27  RRRVARVRLAPRCQWRPLTARAQAAATQPDPEHQAPAN 64


>07_03_0909 +
           22512313-22512474,22513151-22513465,22513539-22516633,
           22516812-22516910,22517031-22517379
          Length = 1339

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 11/21 (52%), Positives = 14/21 (66%)
 Frame = -2

Query: 387 IETNEWFFLFKTSSNSHCFYT 325
           I TN+W  LF+TS + HC  T
Sbjct: 143 IMTNDWEVLFETSLDPHCDLT 163


>11_01_0308 + 2307623-2307697,2308554-2308790,2310109-2310282
          Length = 161

 Score = 27.1 bits (57), Expect = 5.3
 Identities = 11/23 (47%), Positives = 16/23 (69%)
 Frame = +2

Query: 95  SEVLHMPRILRLREMLCSPWFRL 163
           S +LH  R+ R+R+ML  P +RL
Sbjct: 117 SMILHQDRLRRVRQMLTRPRYRL 139


>02_03_0415 +
           18805541-18805610,18805962-18806128,18806616-18806645,
           18807459-18807515,18808268-18808337,18808915-18810998
          Length = 825

 Score = 26.6 bits (56), Expect = 7.0
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = -2

Query: 213 RPQCNFRTRTARILTSRSRNQGEH 142
           RP+ NF   + + L S+SR+ G+H
Sbjct: 446 RPKANFAPTSMKDLPSKSRSSGDH 469


>09_02_0338 + 7426999-7428322,7428390-7428646
          Length = 526

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 14/33 (42%), Positives = 17/33 (51%)
 Frame = +3

Query: 18  RNEMSKFTILAVLLGLVALTYVNGNKVKSYICQ 116
           RN M    +LA  LGLV L       +KSY C+
Sbjct: 411 RNPMLVVALLAATLGLVCLLLQAIYTMKSYYCE 443


>04_04_1268 -
           32262994-32263017,32263411-32263488,32263653-32263800,
           32263890-32264127,32264210-32264420,32264499-32264680,
           32264765-32264866,32265009-32266317,32266906-32266988,
           32267436-32267559
          Length = 832

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
 Frame = +3

Query: 183 PFWFGSYTEVCT-CTCPDGVDPYLGDSIS 266
           PF +  +T V   C CPDG +P   +S S
Sbjct: 378 PFGYCDFTSVIPRCQCPDGFEPNGSNSSS 406


>03_02_0752 -
           10922456-10922644,10922719-10922796,10922888-10923016,
           10923105-10923152,10923243-10923333,10923517-10923648,
           10923869-10924086,10925121-10925271,10925360-10926009,
           10926715-10926786,10926938-10926985,10927105-10927242,
           10927750-10927756,10928064-10928212
          Length = 699

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 10/23 (43%), Positives = 12/23 (52%)
 Frame = +3

Query: 111 CQGYYGCEKCCVHLGSGCEKLKS 179
           C+ Y GC K C +   GC   KS
Sbjct: 473 CEKYCGCSKSCKNRFRGCHCAKS 495


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,821,961
Number of Sequences: 37544
Number of extensions: 193479
Number of successful extensions: 535
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 14,793,348
effective HSP length: 74
effective length of database: 12,015,092
effective search space used: 660830060
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)