Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_C01
         (581 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    60   2e-11
AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.    22   3.8  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   5.1  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   5.1  
AY739658-1|AAU85297.1|  664|Apis mellifera hyperpolarization-act...    22   5.1  
AY280848-1|AAQ16312.1|  632|Apis mellifera hyperpolarization-act...    22   5.1  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   5.1  
U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodops...    21   8.9  
U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.    21   8.9  
AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength rhodo...    21   8.9  
AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor pro...    21   8.9  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.9  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 60.1 bits (139), Expect = 2e-11
 Identities = 61/189 (32%), Positives = 87/189 (46%), Gaps = 3/189 (1%)
 Frame = +2

Query: 2   SLISSKYVLTAAHCVTGAILIEGTPK-NVRLGEYNTTNNGPDCMKGTKDCAHPVVTAPIE 178
           ++IS +YVLTAAHC    I+ E T K  + +GE++ +         +K   +  V   I 
Sbjct: 191 TIISKRYVLTAAHC----IIDENTTKLAIVVGEHDWS---------SKTETNATVLHSIN 237

Query: 179 KTIPHPDY--IPNDVQGRHDIALIRLMVTAPYTDFVRPICLPSLDYTQQPPADFEMYVAG 352
           K I HP Y  I  D    +DIAL++      + D V P CLP   +     A  ++ V G
Sbjct: 238 KVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLP-FQHFLDSFAGSDVTVLG 296

Query: 353 WGMYKQFISGTGLSSTVKQHVKLPYVDRDRCQAAQRTLRGGEALVITKEQLCAGGKPGED 532
           WG      S  G+ S + Q   L  + +  C         G  +V     +CA  K G+D
Sbjct: 297 WG----HTSFNGMLSHILQKTTLNMLTQVECYKYY-----GNIMV---NAMCAYAK-GKD 343

Query: 533 ACRGDSGGP 559
           AC+ DSGGP
Sbjct: 344 ACQMDSGGP 352


>AY921579-1|AAX14899.1|  996|Apis mellifera ephrin receptor protein.
          Length = 996

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 13/45 (28%), Positives = 19/45 (42%)
 Frame = +2

Query: 347 AGWGMYKQFISGTGLSSTVKQHVKLPYVDRDRCQAAQRTLRGGEA 481
           AG+   +  I G       +  +KLP   R     A +TL+ G A
Sbjct: 630 AGYITIEAIIGGGEFGDVCRGKLKLPPDGRTEIDVAIKTLKPGSA 674


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +2

Query: 197 DYIPNDVQGRHDIALIRLMVTAPYTDF 277
           D++PN    +H+   + L    PY ++
Sbjct: 119 DFVPNHTSDQHEWFQLSLKNIEPYNNY 145


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/13 (53%), Positives = 8/13 (61%)
 Frame = +1

Query: 25  AHCCTLCHWSNLD 63
           AHC  LCH  + D
Sbjct: 741 AHCFALCHCCDFD 753


>AY739658-1|AAU85297.1|  664|Apis mellifera
           hyperpolarization-activated ion channelvariant L
           protein.
          Length = 664

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 159 TGCAQSLVPFMQSGP 115
           +GC Q LVP +Q  P
Sbjct: 293 SGCLQFLVPMLQGFP 307


>AY280848-1|AAQ16312.1|  632|Apis mellifera
           hyperpolarization-activated ion channel protein.
          Length = 632

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 8/15 (53%), Positives = 10/15 (66%)
 Frame = -3

Query: 159 TGCAQSLVPFMQSGP 115
           +GC Q LVP +Q  P
Sbjct: 261 SGCLQFLVPMLQGFP 275


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 5.1
 Identities = 7/27 (25%), Positives = 14/27 (51%)
 Frame = +2

Query: 197 DYIPNDVQGRHDIALIRLMVTAPYTDF 277
           D++PN    +H+   + L    PY ++
Sbjct: 119 DFVPNHTSDQHEWFQLSLKNIEPYNNY 145


>U26026-1|AAA69069.1|  377|Apis mellifera long-wavelength rhodopsin
           protein.
          Length = 377

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 120 GPLFVVLYSPKRTFFGVPSI 61
           GPLF  +Y+   + FG  SI
Sbjct: 121 GPLFCQIYAMLGSLFGCGSI 140


>U15954-1|AAA67442.1|   53|Apis mellifera abaecin precursor protein.
          Length = 53

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 347 RRTFQNLPGVVAYNPK 300
           RR F   PG   +NPK
Sbjct: 31  RRPFPTFPGQGPFNPK 46


>AY703752-1|AAU12748.1|  152|Apis mellifera long-wavelength
           rhodopsin protein.
          Length = 152

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = -3

Query: 120 GPLFVVLYSPKRTFFGVPSI 61
           GPLF  +Y+   + FG  SI
Sbjct: 87  GPLFCQIYAMLGSLFGCGSI 106


>AF442147-1|AAL35348.1|   33|Apis mellifera abaecin precursor
           protein.
          Length = 33

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 8/16 (50%), Positives = 9/16 (56%)
 Frame = -1

Query: 347 RRTFQNLPGVVAYNPK 300
           RR F   PG   +NPK
Sbjct: 17  RRPFPTFPGQGPFNPK 32


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.0 bits (42), Expect = 8.9
 Identities = 10/28 (35%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -3

Query: 555 PPESPLHASSPGLPPAHSCS-LVITSAS 475
           P + P     PG PP+ + S ++I+ AS
Sbjct: 42  PSQGPPPGGPPGAPPSQNPSQMMISPAS 69


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,496
Number of Sequences: 438
Number of extensions: 4542
Number of successful extensions: 15
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16870914
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)