Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B24
         (520 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    26   0.66 
AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.      24   2.7  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   4.7  
AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcript...    23   4.7  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 26.2 bits (55), Expect = 0.66
 Identities = 16/34 (47%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
 Frame = +1

Query: 1   GDKNQVGAP-MPGTVLTIKVKEGDKVEKGQPIAV 99
           GD+   G+P +P TV  IK   GDK E G P A+
Sbjct: 457 GDRGVPGSPGLPATVAAIK---GDKGEPGFPGAI 487


>AY578806-1|AAT07311.1|  110|Anopheles gambiae myoglianin protein.
          Length = 110

 Score = 24.2 bits (50), Expect = 2.7
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = +2

Query: 200 SFVPSNEFIHVQGVTLKSMPIIS*ERVNMI 289
           SF+P  E  HV  ++  ++P  S +++N I
Sbjct: 54  SFLPKYEHTHVMQLSTSAIPCCSPKKMNSI 83


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/proton
            exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 117  GDDRSGPKSWARQVSRHHQRSETRG 191
            G  R+GP + A  V+  H+R+  RG
Sbjct: 1073 GISRAGPHATAFPVTASHRRNNRRG 1097


>AB097127-1|BAC82595.1| 1209|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1209

 Score = 23.4 bits (48), Expect = 4.7
 Identities = 13/46 (28%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
 Frame = +3

Query: 99  PLGHEDGD--DRSGPKSWARQVSRHHQRSETRGGRPHLYHRMNSYM 230
           P G  +G    ++   +W R++      + T+ GR   Y R NS M
Sbjct: 289 PQGDSEGRPCSKAEKPAWMRRLENRINATRTKIGRMQEYQRGNSSM 334


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 488,729
Number of Sequences: 2352
Number of extensions: 8650
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47360208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)