Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_B24
(520 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical pr... 85 2e-17
AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate carb... 85 2e-17
U49829-3|AAA93384.1| 724|Caenorhabditis elegans Hypothetical pr... 55 4e-08
Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical pr... 51 6e-07
Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical pr... 32 0.21
U58755-12|ABJ99069.1| 205|Caenorhabditis elegans Hypothetical p... 29 2.0
U58755-11|AAB00701.1| 247|Caenorhabditis elegans Hypothetical p... 29 2.0
U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical p... 29 2.0
U28991-9|AAU05576.1| 484|Caenorhabditis elegans Hypothetical pr... 29 2.0
Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical p... 28 3.5
AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical ... 28 3.5
Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical pr... 27 6.1
AF068709-2|AAC19251.2| 429|Caenorhabditis elegans Hypothetical ... 27 6.1
AF068709-1|AAQ91906.1| 449|Caenorhabditis elegans Hypothetical ... 27 6.1
AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRN... 27 6.1
U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical pr... 27 8.0
AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine re... 27 8.0
AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical ... 27 8.0
>Z81052-1|CAB02872.1| 1175|Caenorhabditis elegans Hypothetical protein
D2023.2 protein.
Length = 1175
Score = 85.4 bits (202), Expect = 2e-17
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +1
Query: 1 GDKNQVGAPMPGTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPRAGLVKSVDITNGQ 180
G + +GAPMPG VL +K+KEGDKV K QP+ VLSAMKMEM++ +P AG VK++ G
Sbjct: 1103 GVRGHIGAPMPGDVLELKIKEGDKVTKKQPLFVLSAMKMEMVIDSPIAGTVKAIHAPQGT 1162
Query: 181 KLEGDDLICTIE 216
K DL+ +E
Sbjct: 1163 KCSAGDLVVEVE 1174
>AF237467-1|AAF60326.1| 1175|Caenorhabditis elegans pyruvate
carboxylase protein.
Length = 1175
Score = 85.4 bits (202), Expect = 2e-17
Identities = 38/72 (52%), Positives = 50/72 (69%)
Frame = +1
Query: 1 GDKNQVGAPMPGTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPRAGLVKSVDITNGQ 180
G + +GAPMPG VL +K+KEGDKV K QP+ VLSAMKMEM++ +P AG VK++ G
Sbjct: 1103 GVRGHIGAPMPGDVLELKIKEGDKVTKKQPLFVLSAMKMEMVIDSPIAGTVKAIHAPQGT 1162
Query: 181 KLEGDDLICTIE 216
K DL+ +E
Sbjct: 1163 KCSAGDLVVEVE 1174
>U49829-3|AAA93384.1| 724|Caenorhabditis elegans Hypothetical
protein F27D9.5 protein.
Length = 724
Score = 54.8 bits (126), Expect = 4e-08
Identities = 23/65 (35%), Positives = 41/65 (63%)
Frame = +1
Query: 22 APMPGTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPRAGLVKSVDITNGQKLEGDDL 201
+PMPG + + VK GD V +GQ + V+ AMKM+ + A + G VK+V++ G ++ ++
Sbjct: 660 SPMPGAIKNVNVKPGDMVSEGQELVVMEAMKMQNSLHAGKTGRVKAVNVKVGATVDEGEV 719
Query: 202 ICTIE 216
+ +E
Sbjct: 720 LVELE 724
>Z81074-2|CAB03038.2| 671|Caenorhabditis elegans Hypothetical
protein F32B6.2 protein.
Length = 671
Score = 50.8 bits (116), Expect = 6e-07
Identities = 23/55 (41%), Positives = 35/55 (63%)
Frame = +1
Query: 22 APMPGTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPRAGLVKSVDITNGQKL 186
APMPG + I VK G++V GQ + V++AMKME I++AP V+ + G+ +
Sbjct: 607 APMPGIIEKILVKPGEQVTTGQALVVMTAMKMEYIIRAPEDSTVEHIKCQAGKNV 661
>Z77659-4|CAB01163.1| 507|Caenorhabditis elegans Hypothetical
protein F23B12.5 protein.
Length = 507
Score = 32.3 bits (70), Expect = 0.21
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Frame = +1
Query: 34 GTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPRAGLVKSVDITNGQK-LEGDDLICT 210
GTV++ + KEGD++ +G + + K M + P G + + I G K + L+C
Sbjct: 92 GTVVSWQKKEGDQLSEGDLLCEIETDKATMGFETPEEGYLAKILIQEGSKDVPIGKLLCI 151
Query: 211 I 213
I
Sbjct: 152 I 152
>U58755-12|ABJ99069.1| 205|Caenorhabditis elegans Hypothetical
protein C34D4.4b protein.
Length = 205
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/39 (28%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = -3
Query: 356 TVLILQLYIKN--IFFFYYIVFFSESYLHALMILLALIS 246
T+++ L K +FF+++ FF+ S++ +++L L+S
Sbjct: 32 TIVLAHLSFKGAALFFYFFANFFTNSFIVQFLVILTLLS 70
>U58755-11|AAB00701.1| 247|Caenorhabditis elegans Hypothetical
protein C34D4.4a protein.
Length = 247
Score = 29.1 bits (62), Expect = 2.0
Identities = 11/39 (28%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = -3
Query: 356 TVLILQLYIKN--IFFFYYIVFFSESYLHALMILLALIS 246
T+++ L K +FF+++ FF+ S++ +++L L+S
Sbjct: 74 TIVLAHLSFKGAALFFYFFANFFTNSFIVQFLVILTLLS 112
>U28991-10|AAK68306.2| 487|Caenorhabditis elegans Hypothetical
protein F08F8.10a protein.
Length = 487
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +3
Query: 36 NSTYYQSKGR**SGER-SADSRPLGHEDGDDRSGPKSWARQVSRHHQRSETRGGRP 200
NS + +GR SG+ D +D R G SW R V HH + + + P
Sbjct: 409 NSFGSRRRGRHHSGQNFDVDEHEYYDDDHGAREGSSSWNRPVDSHHYQGKIKPAFP 464
>U28991-9|AAU05576.1| 484|Caenorhabditis elegans Hypothetical
protein F08F8.10b protein.
Length = 484
Score = 29.1 bits (62), Expect = 2.0
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +3
Query: 36 NSTYYQSKGR**SGER-SADSRPLGHEDGDDRSGPKSWARQVSRHHQRSETRGGRP 200
NS + +GR SG+ D +D R G SW R V HH + + + P
Sbjct: 406 NSFGSRRRGRHHSGQNFDVDEHEYYDDDHGAREGSSSWNRPVDSHHYQGKIKPAFP 461
>Z11505-10|CAA77588.2| 590|Caenorhabditis elegans Hypothetical
protein F59B2.11 protein.
Length = 590
Score = 28.3 bits (60), Expect = 3.5
Identities = 21/69 (30%), Positives = 27/69 (39%)
Frame = +3
Query: 33 GNSTYYQSKGR**SGERSADSRPLGHEDGDDRSGPKSWARQVSRHHQRSETRGGRPHLYH 212
GN+ S GR G R RP E G+D R S ++ ET R Y
Sbjct: 105 GNTRKESSGGRGGRGGRGRRPRPQNSESGEDSDNRSGGRRGQSNQYEDEETNEER---YD 161
Query: 213 RMNSYMYRG 239
R + + RG
Sbjct: 162 RNGNRITRG 170
>AC024824-2|AAK85502.1| 740|Caenorhabditis elegans Hypothetical
protein Y55B1BR.2 protein.
Length = 740
Score = 28.3 bits (60), Expect = 3.5
Identities = 14/26 (53%), Positives = 17/26 (65%)
Frame = +2
Query: 137 QELGSSSQSTSPTVRNSRGTTSFVPS 214
Q L SS++ SP+ RN R TT VPS
Sbjct: 326 QGLQGSSRTMSPSPRNIRSTTPSVPS 351
>Z81038-5|CAB02766.3| 970|Caenorhabditis elegans Hypothetical
protein C25A1.7 protein.
Length = 970
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 SSQSTSPTVRNSRGTTSFVPSNEFI-HVQGVTLKS 253
SS STS N + +T F+PS+ FI H++ S
Sbjct: 27 SSSSTSSETPNKKKSTVFLPSSSFINHIKSTERSS 61
>AF068709-2|AAC19251.2| 429|Caenorhabditis elegans Hypothetical
protein C24B9.3a protein.
Length = 429
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 128 TIISIFMAERTAIG*PFSTLSPSFTLIVSTVPGIGAP 18
T +S +MA G FST+SP+ T + + P + P
Sbjct: 208 TYVSAWMAALCCPGVQFSTVSPAPTTVPTQSPSVSCP 244
>AF068709-1|AAQ91906.1| 449|Caenorhabditis elegans Hypothetical
protein C24B9.3b protein.
Length = 449
Score = 27.5 bits (58), Expect = 6.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -3
Query: 128 TIISIFMAERTAIG*PFSTLSPSFTLIVSTVPGIGAP 18
T +S +MA G FST+SP+ T + + P + P
Sbjct: 228 TYVSAWMAALCCPGVQFSTVSPAPTTVPTQSPSVSCP 264
>AB096631-1|BAC76731.1| 972|Caenorhabditis elegans isoleucyl-tRNA
synthetase (mitochondrial)protein.
Length = 972
Score = 27.5 bits (58), Expect = 6.1
Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 152 SSQSTSPTVRNSRGTTSFVPSNEFI-HVQGVTLKS 253
SS STS N + +T F+PS+ FI H++ S
Sbjct: 27 SSSSTSSETPNKKKSTVFLPSSSFINHIKSTERSS 61
>U88180-1|AAB42294.1| 203|Caenorhabditis elegans Hypothetical
protein T27A3.4 protein.
Length = 203
Score = 27.1 bits (57), Expect = 8.0
Identities = 21/65 (32%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Frame = +3
Query: 18 GCSDAGNSTYYQSKGR**SGERSAD-SRPL----GHEDGDDRSGPKSWARQVSRHHQRSE 182
G + + Y GR S +RS SRP RSG + +R+ SRH S+
Sbjct: 110 GRRSSSRGSVYGRTGRSRSSKRSRSRSRPRTRSGSRSSSRSRSGSRRSSRRRSRHRSSSK 169
Query: 183 TRGGR 197
RG R
Sbjct: 170 ARGRR 174
>AF098997-8|AAC68719.3| 335|Caenorhabditis elegans Serpentine
receptor, class i protein54 protein.
Length = 335
Score = 27.1 bits (57), Expect = 8.0
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = -3
Query: 302 VFFSESYLHALMILLALISKSPPVHV*IHSMVQMRSSPSS 183
VF + LH+ + ++ LI PP + +VQ ++SP S
Sbjct: 276 VFLMVACLHSTLNVIVLIVTCPPYRRFLIQLVQRKNSPKS 315
>AF047653-6|AAC04462.2| 463|Caenorhabditis elegans Hypothetical
protein W02F12.5 protein.
Length = 463
Score = 27.1 bits (57), Expect = 8.0
Identities = 15/51 (29%), Positives = 27/51 (52%)
Frame = +1
Query: 34 GTVLTIKVKEGDKVEKGQPIAVLSAMKMEMIVQAPRAGLVKSVDITNGQKL 186
G + +K K GD V + + +A + K + V AP+AG + + +G K+
Sbjct: 78 GDIRWLKQK-GDHVNEDELVAEIETDKTSVEVPAPQAGTIVEFLVEDGAKV 127
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,890,119
Number of Sequences: 27780
Number of extensions: 208920
Number of successful extensions: 622
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 622
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -