Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B23
         (553 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      25   0.44 
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      25   0.44 
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   5.4  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   7.2  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   7.2  
AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembran...    21   9.5  
AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembran...    21   9.5  

>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 101 PCRTQAQLCWRSVRHGDVLPVARRIR 24
           PCR + QL WR   HG     AR  R
Sbjct: 589 PCRPREQLTWRRNFHGPHRLAARSRR 614


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 25.0 bits (52), Expect = 0.44
 Identities = 12/26 (46%), Positives = 13/26 (50%)
 Frame = -3

Query: 101 PCRTQAQLCWRSVRHGDVLPVARRIR 24
           PCR + QL WR   HG     AR  R
Sbjct: 481 PCRPREQLTWRRNFHGPHRLAARSRR 506


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 5.4
 Identities = 6/22 (27%), Positives = 13/22 (59%)
 Frame = -3

Query: 227 FCKWRPVSDRPRGSCISQGNTV 162
           F +W+ + ++PR     +GN +
Sbjct: 444 FARWKDILEKPRQRGTLEGNNM 465


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 88  KLSCVGDQYVTEMCYQLLAEFARY 17
           + SC    Y T+ C+ L     RY
Sbjct: 286 RYSCRDCSYATKYCHSLKIHLRRY 309


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 88  KLSCVGDQYVTEMCYQLLAEFARY 17
           + SC    Y T+ C+ L     RY
Sbjct: 44  RYSCRDCSYATKYCHSLKIHLRRY 67


>AF442747-1|AAL40947.1|  669|Tribolium castaneum ABC transmembrane
           transporter protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 385 DIRLLLSDGHTCYLG 341
           D  LL+S+G T +LG
Sbjct: 288 DKLLLMSEGRTAFLG 302


>AF422804-1|AAL56571.1|  669|Tribolium castaneum ABC transmembrane
           transporter white protein.
          Length = 669

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/15 (53%), Positives = 11/15 (73%)
 Frame = -1

Query: 385 DIRLLLSDGHTCYLG 341
           D  LL+S+G T +LG
Sbjct: 288 DKLLLMSEGRTAFLG 302


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 119,404
Number of Sequences: 336
Number of extensions: 2511
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13621010
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)