Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B22
         (270 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclas...    27   2.4  
AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl cyc...    27   2.4  
AL034488-2|CAA22448.1|  210|Caenorhabditis elegans Hypothetical ...    26   4.2  
AF016420-9|AAB65304.1|  410|Caenorhabditis elegans Serpentine re...    26   4.2  
AF016450-5|AAB65984.2|  280|Caenorhabditis elegans Serpentine re...    25   7.3  
AF047657-12|AAK18941.3|  367|Caenorhabditis elegans Serpentine r...    25   9.7  

>U80842-1|AAB37946.2| 1000|Caenorhabditis elegans Guanylyl cyclase
           protein 15 protein.
          Length = 1000

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = -3

Query: 151 MIGALMLTYNYTTLNHNITALLPC 80
           ++G++ + Y++++ +HN  +L PC
Sbjct: 241 IVGSMQIYYHFSSSSHNSYSLFPC 264


>AF016681-14|AAB66169.1| 1119|Caenorhabditis elegans Guanylyl
           cyclase protein 21 protein.
          Length = 1119

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 7/24 (29%), Positives = 18/24 (75%)
 Frame = -3

Query: 151 MIGALMLTYNYTTLNHNITALLPC 80
           ++G++ + Y++++ +HN  +L PC
Sbjct: 302 IVGSIQIYYHFSSSSHNSYSLFPC 325


>AL034488-2|CAA22448.1|  210|Caenorhabditis elegans Hypothetical
           protein Y54G11A.2 protein.
          Length = 210

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 12/27 (44%), Positives = 14/27 (51%)
 Frame = +2

Query: 5   IDCCARVKKYRIKTL*LNNHRKFYIAW 85
           IDCC  VK+  I+   LNN    Y  W
Sbjct: 68  IDCCQLVKQNSIEGCKLNNVAIVYTMW 94


>AF016420-9|AAB65304.1|  410|Caenorhabditis elegans Serpentine
           receptor, class r protein6 protein.
          Length = 410

 Score = 25.8 bits (54), Expect = 4.2
 Identities = 15/43 (34%), Positives = 20/43 (46%)
 Frame = -3

Query: 169 FFGTVIMIGALMLTYNYTTLNHNITALLPCYIELSMIV*LKCF 41
           F+   IM  A+M +     L  N T + P YI +  I  L CF
Sbjct: 163 FYIAAIMSHAIMSSIAQKILIANKTVIAPLYIAMVFINLLSCF 205


>AF016450-5|AAB65984.2|  280|Caenorhabditis elegans Serpentine
           receptor, class t protein68 protein.
          Length = 280

 Score = 25.0 bits (52), Expect = 7.3
 Identities = 13/53 (24%), Positives = 26/53 (49%)
 Frame = -3

Query: 169 FFGTVIMIGALMLTYNYTTLNHNITALLPCYIELSMIV*LKCFYSIFLHACTT 11
           + G + M+  L ++      N   T+  P +++LS++  L     +FL+ C T
Sbjct: 103 WIGDLPMMSLLSVSRVLIFTNTIKTSKFPIFVKLSVVCILSWVVYVFLYGCIT 155


>AF047657-12|AAK18941.3|  367|Caenorhabditis elegans Serpentine
           receptor, class w protein4 protein.
          Length = 367

 Score = 24.6 bits (51), Expect = 9.7
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -2

Query: 95  CFITMLYRTFYDCLTKVFLFDISSR 21
           CF+TM YR     L  V + DI+ R
Sbjct: 100 CFLTMTYRDAVLLLYPVIVLDITQR 124


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,449,762
Number of Sequences: 27780
Number of extensions: 85269
Number of successful extensions: 129
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 127
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 129
length of database: 12,740,198
effective HSP length: 68
effective length of database: 10,851,158
effective search space used: 227874318
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)