Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_B22
(270 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 23 0.51
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 23 0.51
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 3.6
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 20 4.7
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 20 4.7
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 20 4.7
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 20 4.7
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 20 4.7
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 20 4.7
AB023025-1|BAA74592.1| 133|Apis mellifera actin protein. 20 4.7
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 20 6.2
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 20 6.2
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 20 6.2
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 20 6.2
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 20 6.2
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 20 6.2
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 20 6.2
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 20 6.2
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 20 6.2
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 23.4 bits (48), Expect = 0.51
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -3
Query: 169 FFGTVIMIGALMLTYNYTTLNHNI--TALLPCYI 74
FF + +GAL+ +Y N+N+ AL+ C +
Sbjct: 288 FFSYALGLGALVALGSYNKFNNNVYKDALIVCTV 321
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 23.4 bits (48), Expect = 0.51
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = -3
Query: 169 FFGTVIMIGALMLTYNYTTLNHNI--TALLPCYI 74
FF + +GAL+ +Y N+N+ AL+ C +
Sbjct: 341 FFSYALGLGALVALGSYNKFNNNVYKDALIVCTV 374
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 20.6 bits (41), Expect = 3.6
Identities = 10/31 (32%), Positives = 14/31 (45%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITALLPCYIELSMI 59
+I +L YNY N+N L I + I
Sbjct: 314 IISSLSNNYNYNNYNNNYKPLYYNIINIEQI 344
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITALLPCY 77
+I +L YNY+ N+N L CY
Sbjct: 81 IISSLSNNYNYSNYNNNNYKQL-CY 104
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITALLPCY 77
+I +L YNY+ N+N L CY
Sbjct: 81 IISSLSNNYNYSNYNNNNYKQL-CY 104
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITALLPCY 77
+I +L YNY+ N+N L CY
Sbjct: 81 IISSLSNNYNYSNYNNNNYKQL-CY 104
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITALLPCY 77
+I +L YNY+ N+N L CY
Sbjct: 81 IISSLSNNYNYSNYNNNNYKQL-CY 104
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITALLPCY 77
+I +L YNY+ N+N L CY
Sbjct: 81 IISSLSNNYNYSNYNNNNYKQL-CY 104
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 20.2 bits (40), Expect = 4.7
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITALLPCY 77
+I +L YNY+ N+N L CY
Sbjct: 81 IISSLSNNYNYSNYNNNNYKQL-CY 104
>AB023025-1|BAA74592.1| 133|Apis mellifera actin protein.
Length = 133
Score = 20.2 bits (40), Expect = 4.7
Identities = 12/48 (25%), Positives = 23/48 (47%)
Frame = -3
Query: 169 FFGTVIMIGALMLTYNYTTLNHNITALLPCYIELSMIV*LKCFYSIFL 26
+ TV+ G M + ITAL P +++ +I + YS+++
Sbjct: 69 YANTVLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPEKKYSVWI 116
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITAL 89
+I +L YNY N+N L
Sbjct: 81 IISSLSNNYNYNNYNNNYKPL 101
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITAL 89
+I +L YNY N+N L
Sbjct: 81 IISSLSNNYNYNNYNNNYKPL 101
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITAL 89
+I +L YNY N+N L
Sbjct: 81 IISSLSNNYNYNNYNNNYKPL 101
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITAL 89
+I +L YNY N+N L
Sbjct: 81 IISSLSNNYNYNNYNNNYKPL 101
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITAL 89
+I +L YNY N+N L
Sbjct: 314 IISSLSNNYNYNNYNNNYKPL 334
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITAL 89
+I +L YNY N+N L
Sbjct: 314 IISSLSNNYNYNNYNNNYKPL 334
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITAL 89
+I +L YNY N+N L
Sbjct: 314 IISSLSNNYNYNNYNNNYKPL 334
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITAL 89
+I +L YNY N+N L
Sbjct: 314 IISSLSNNYNYNNYNNNYKPL 334
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 19.8 bits (39), Expect = 6.2
Identities = 8/21 (38%), Positives = 11/21 (52%)
Frame = -3
Query: 151 MIGALMLTYNYTTLNHNITAL 89
+I +L YNY N+N L
Sbjct: 303 IISSLSNNYNYNNYNNNYKPL 323
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 71,736
Number of Sequences: 438
Number of extensions: 1472
Number of successful extensions: 20
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5138079
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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