Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B18
         (524 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    29   0.033
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    29   0.033
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    23   1.6  
AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII pr...    22   3.8  
AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII pr...    22   3.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.7  

>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
            protein.
          Length = 1464

 Score = 28.7 bits (61), Expect = 0.033
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
 Frame = +2

Query: 14   IGSLVTVGAIFGPFVGGFAASTIGRKW-GLISSSLPMSIGFILVAA--ARNIGMIYAGRV 184
            IG+++  G IF   VG F A+    +W     + LP+++ FILV A  + +I + +AG +
Sbjct: 891  IGTVIGPGTIFLMLVGAFVAAFGLDQWSSFYWNLLPIAV-FILVCATCSSDIQLFFAGLI 949

Query: 185  --FWGLAVGMLF 214
               +GL +  +F
Sbjct: 950  SAIYGLIMMAVF 961


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase CHS2
            protein.
          Length = 1464

 Score = 28.7 bits (61), Expect = 0.033
 Identities = 23/72 (31%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
 Frame = +2

Query: 14   IGSLVTVGAIFGPFVGGFAASTIGRKW-GLISSSLPMSIGFILVAA--ARNIGMIYAGRV 184
            IG+++  G IF   VG F A+    +W     + LP+++ FILV A  + +I + +AG +
Sbjct: 891  IGTVIGPGTIFLMLVGAFVAAFGLDQWSSFYWNLLPIAV-FILVCATCSSDIQLFFAGLI 949

Query: 185  --FWGLAVGMLF 214
               +GL +  +F
Sbjct: 950  SAIYGLIMMAVF 961


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +2

Query: 275 SFLQVFVVIGFLLVYSVGPFVS 340
           +F+Q F  + F L  S+G  VS
Sbjct: 29  TFIQKFYAVAFFLALSIGVVVS 50


>AF017415-1|AAB70262.1|  343|Tribolium castaneum abdominal-AII
           protein.
          Length = 343

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 217 SEQHSDSQTPEHTTSVYHPYIACCSH 140
           S QHS S       +  +PY++   H
Sbjct: 44  SPQHSSSSASTSPAARMYPYVSAAHH 69


>AF017414-1|AAB70260.1|  209|Tribolium castaneum abdominal-AII
           protein.
          Length = 209

 Score = 21.8 bits (44), Expect = 3.8
 Identities = 8/26 (30%), Positives = 12/26 (46%)
 Frame = -2

Query: 217 SEQHSDSQTPEHTTSVYHPYIACCSH 140
           S QHS S       +  +PY++   H
Sbjct: 44  SPQHSSSSASTSPAARMYPYVSAAHH 69


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.0 bits (42), Expect = 6.7
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = -1

Query: 452 LNRRHPCINGRLVSQEQK 399
           L  R+  +NGRL+  E K
Sbjct: 828 LKNRYIILNGRLIKMETK 845


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,124
Number of Sequences: 336
Number of extensions: 2817
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12678017
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)