Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B18
         (524 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    27   0.29 
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    27   0.51 
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            26   0.89 
AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.           26   0.89 

>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 27.5 bits (58), Expect = 0.29
 Identities = 25/105 (23%), Positives = 42/105 (40%)
 Frame = -3

Query: 315  TNKNPITTNT*RNDPRAPRLSSVAISAQYIGVIVNSIPTARPQNTRPAYIIPILRAAATN 136
            T  NP++++T  +    P  S   +++         IPTA   N RP++    +   AT 
Sbjct: 800  TPGNPLSSST--SSSLYPNGSIGGVNSLAAAAAATLIPTATT-NVRPSFTTTSISNGATT 856

Query: 135  INPMDMGSDELMRPHLRPIVEAANPPTKGPNIAPTVTKEPIHESS 1
            +     GS+       +PIV      T   +++    K    ESS
Sbjct: 857  LQQQHAGSEAGHPYRFQPIVPELPTTTTTMDVSRCSPKLECRESS 901


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 26.6 bits (56), Expect = 0.51
 Identities = 24/105 (22%), Positives = 42/105 (40%)
 Frame = -3

Query: 315  TNKNPITTNT*RNDPRAPRLSSVAISAQYIGVIVNSIPTARPQNTRPAYIIPILRAAATN 136
            T  NP+++++  +    P  S   +++         IPTA   N RP++    +   AT 
Sbjct: 800  TPDNPLSSSS-TSSSLYPNGSIGGVNSLAAAAAATLIPTATT-NVRPSFTTTSISNGATT 857

Query: 135  INPMDMGSDELMRPHLRPIVEAANPPTKGPNIAPTVTKEPIHESS 1
            +     GS+       +PIV      T   +++    K    ESS
Sbjct: 858  LQQQHAGSEAGHPYRFQPIVPELPTTTTTMDVSRCSPKLECRESS 902


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 25.8 bits (54), Expect = 0.89
 Identities = 15/54 (27%), Positives = 24/54 (44%)
 Frame = +2

Query: 11   WIGSLVTVGAIFGPFVGGFAASTIGRKWGLISSSLPMSIGFILVAAARNIGMIY 172
            W      VGA  G  VGGFA   I      ++ ++  +   + + AA ++G  Y
Sbjct: 2717 WEVKKAIVGATMGAIVGGFAPVGIAGSITFLAGAVGTTAA-VGITAATSVGFAY 2769


>AY344829-1|AAR05800.1|  334|Anopheles gambiae ICHIT protein.
          Length = 334

 Score = 25.8 bits (54), Expect = 0.89
 Identities = 16/67 (23%), Positives = 25/67 (37%), Gaps = 4/67 (5%)
 Frame = -3

Query: 387 TKTITMAKPTYWTTL*LTKGPTLYTNKN----PITTNT*RNDPRAPRLSSVAISAQYIGV 220
           T T     P+ WT   +T    ++T+      P TT T  + PR P  ++  +       
Sbjct: 136 TTTSAPTTPSQWTDPTITTTTPIWTDPTTWSAPTTTTTWSDQPRPPTTTTTTVWTDSTAT 195

Query: 219 IVNSIPT 199
                PT
Sbjct: 196 TTTHAPT 202


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 588,725
Number of Sequences: 2352
Number of extensions: 11939
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 48205926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)