Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_B16
(624 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g54030.1 68418.m06720 DC1 domain-containing protein contains ... 33 0.15
At4g01575.1 68417.m00205 serine protease inhibitor, Kazal-type f... 32 0.36
At2g17620.1 68415.m02038 cyclin, putative (CYC2a) similar to cyc... 31 0.62
At5g60920.1 68418.m07642 phytochelatin synthetase, putative / CO... 31 0.82
At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein... 30 1.4
At3g17750.1 68416.m02265 protein kinase family protein contains ... 30 1.4
At3g62810.1 68416.m07057 complex 1 family protein / LVR family p... 29 2.5
At5g55960.1 68418.m06979 expressed protein 29 3.3
At3g61980.1 68416.m06961 serine protease inhibitor, Kazal-type f... 29 3.3
At3g32904.1 68416.m04164 hypothetical protein 29 3.3
At1g73460.1 68414.m08504 protein kinase family protein contains ... 29 3.3
At1g73450.1 68414.m08503 protein kinase, putative similar to nuc... 29 3.3
At5g56050.1 68418.m06993 hypothetical protein 28 5.8
At1g61870.1 68414.m06981 pentatricopeptide (PPR) repeat-containi... 28 5.8
At1g55350.4 68414.m06326 calpain-type cysteine protease family i... 27 7.7
At1g55350.3 68414.m06325 calpain-type cysteine protease family i... 27 7.7
At1g55350.2 68414.m06324 calpain-type cysteine protease family i... 27 7.7
At1g55350.1 68414.m06323 calpain-type cysteine protease family i... 27 7.7
>At5g54030.1 68418.m06720 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 419
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = +1
Query: 133 KIYSPVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVGIPCYCTLEYAPVCGSNGK 312
K+Y+ + S G+ YEN C F C+ + + T C + + C P+ S K
Sbjct: 83 KVYTHIFTSSGRIYENTCHF-CQ---SKLEFLFARCTICNLNVDIECLFALPPLTISEPK 138
Query: 313 TYANKCSL 336
+ + SL
Sbjct: 139 HHKHSLSL 146
>At4g01575.1 68417.m00205 serine protease inhibitor, Kazal-type
family protein contains Pfam domain PF00050: Kazal-type
serine protease inhibitor domain
Length = 144
Score = 31.9 bits (69), Expect = 0.36
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 4/69 (5%)
Frame = +1
Query: 355 IPSLKMEHD---GE-CQGAKLASLHPCICTREKDPVCGSDGVTYSNLCLLKCASLSKPSL 522
+PS K+ + GE C+G + P C R DPVCG D VTY C CA +
Sbjct: 47 LPSEKINGEKNRGEFCEGIAKPASCPVQCFRP-DPVCGEDSVTY--WC--GCADALCHGV 101
Query: 523 SIEHTGPCD 549
+ G CD
Sbjct: 102 RVVKQGACD 110
Score = 27.5 bits (58), Expect = 7.7
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 145 PVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVG 258
PVCG D TY C D + +VK AC+VG
Sbjct: 80 PVCGEDSVTYWCGC-----ADALCHGVRVVKQGACDVG 112
>At2g17620.1 68415.m02038 cyclin, putative (CYC2a) similar to cyclin
2b protein [Arabidopsis thaliana] GI:509423; contains
Pfam profiles PF00134: Cyclin, N-terminal domain,
PF02984: Cyclin, C-terminal domain; identical to cDNA
cyc2a mRNA for cyclin 2a protein GI:728518
Length = 429
Score = 31.1 bits (67), Expect = 0.62
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%)
Frame = +1
Query: 91 YSVTALPPPLCICGKIYSPVCGSDG-KTYENPCEFYC 198
Y + PP L +Y+ C DG + + + CEF+C
Sbjct: 336 YEMLRFPPSLLAATSVYTAQCTLDGSRKWNSTCEFHC 372
>At5g60920.1 68418.m07642 phytochelatin synthetase, putative / COBRA
cell expansion protein COB, putative similar to
phytochelatin synthetase GI:29570314; similar to
GB:AAK56072; identified in Roudier, et al, Plant Phys.
(2002) 130:538-548 (PMID:12376623); identical to cDNA
putative phytochelatin synthetase GI:3559804; contains
Pfam profile PF04833: Phytochelatin synthetase-like
conserved region
Length = 456
Score = 30.7 bits (66), Expect = 0.82
Identities = 20/60 (33%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +2
Query: 239 TPH-ARWASPATVPWN-MPPSVALTEKLTPTNVHWNAPKRLYRL*RWNMMANARELNWRV 412
TPH A SP T +PP V T + P VHW+ K+ Y+ W + N+R+
Sbjct: 270 TPHLASVVSPPTKKGTVLPPLVQCTRHMCPIRVHWHV-KQNYKE-YWRVKITITNFNYRL 327
>At5g05660.1 68418.m00622 zinc finger (NF-X1 type) family protein
contains PF01422: NF-X1 type zinc finger
Length = 912
Score = 29.9 bits (64), Expect = 1.4
Identities = 27/119 (22%), Positives = 45/119 (37%), Gaps = 10/119 (8%)
Frame = +1
Query: 118 LCICGKIYSPVCGSDGKTYENPCEFYCEKDKT----HSNMTIVKNTACE-----VGIPCY 270
LC CGK P + + C CE+ + H + + C V C+
Sbjct: 165 LCYCGKEEDPPADNPW-ILPHSCGEVCERPLSNNCGHCCLLLCHPGPCASCPKLVKAKCF 223
Query: 271 CT-LEYAPVCGSNGKTYANKCSLECTQKIIPSLKMEHDGECQGAKLASLHPCICTREKD 444
C +E CG + + C I ++ HDGEC + +++ C C + K+
Sbjct: 224 CGGVEDVRRCGHKQFSCGDVCERVLDCNIHNCREICHDGECPPCRERAVYKCSCGKVKE 282
>At3g17750.1 68416.m02265 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 1138
Score = 29.9 bits (64), Expect = 1.4
Identities = 13/27 (48%), Positives = 18/27 (66%)
Frame = -3
Query: 166 YHLTRRRDYRFFRKYITAVAELLPSIL 86
YHL R DY +FR+++ V ELL + L
Sbjct: 887 YHLLRLYDYFYFREHLLIVCELLKANL 913
>At3g62810.1 68416.m07057 complex 1 family protein / LVR family
protein contains Pfam PF05347: Complex 1 protein (LYR
family)
Length = 106
Score = 29.1 bits (62), Expect = 2.5
Identities = 21/67 (31%), Positives = 30/67 (44%)
Frame = +2
Query: 419 RVYARARKIQFAGATASLTAICAS*NARHCPNQA*ASNTPVLAIITECRRWETKTIRTSI 598
R RA K FAG T L A + + N+ ASN+ + ++ E R T+ I T I
Sbjct: 11 RALLRATKKSFAGDTEMLKASASEIRKKFEENRLVASNSDITRLLEEARE-ATQFISTMI 69
Query: 599 LSQMRTE 619
+ E
Sbjct: 70 VQAKLNE 76
>At5g55960.1 68418.m06979 expressed protein
Length = 648
Score = 28.7 bits (61), Expect = 3.3
Identities = 14/32 (43%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = -3
Query: 340 IPVNICWRKFFR-*SHRRGHIPRYSSRGCPPR 248
IP N+ W++ FR S R+ P SS PPR
Sbjct: 14 IPTNLAWQEMFRSASSRKPQDPPSSSSSSPPR 45
>At3g61980.1 68416.m06961 serine protease inhibitor, Kazal-type
family protein contains Pfam domain PF00050: Kazal-type
serine protease inhibitor domain
Length = 117
Score = 28.7 bits (61), Expect = 3.3
Identities = 10/11 (90%), Positives = 11/11 (100%)
Frame = +1
Query: 442 DPVCGSDGVTY 474
DPVCG+DGVTY
Sbjct: 52 DPVCGTDGVTY 62
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/38 (39%), Positives = 18/38 (47%)
Frame = +1
Query: 145 PVCGSDGKTYENPCEFYCEKDKTHSNMTIVKNTACEVG 258
PVCG+DG TY C D +VK AC+ G
Sbjct: 53 PVCGTDGVTYWCGC-----PDAACHGARVVKKGACDTG 85
>At3g32904.1 68416.m04164 hypothetical protein
Length = 330
Score = 28.7 bits (61), Expect = 3.3
Identities = 15/52 (28%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
Frame = +2
Query: 251 RWASPATVP-WNMPPSVALTEKLTPTNVHWNAPKRLYRL*RWNMMANARELN 403
+W +P T P WN P +V + PT W P + +W+ A +L+
Sbjct: 276 QWGTPPTAPQWNSPSNVPQWT-IPPTTPQWGTPSSMP---QWSSSPTAPQLS 323
>At1g73460.1 68414.m08504 protein kinase family protein contains
protein kinase domain Pfam:PF00069
Length = 1169
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 166 YHLTRRRDYRFFRKYITAVAELLPSIL 86
YHL R DY ++R+++ V ELL + L
Sbjct: 918 YHLLRLYDYFYYREHLLIVCELLKANL 944
>At1g73450.1 68414.m08503 protein kinase, putative similar to
nuclear serine/threonine protein kinase GI:3582644 from
[Rattus norvegicus]
Length = 1152
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/27 (44%), Positives = 18/27 (66%)
Frame = -3
Query: 166 YHLTRRRDYRFFRKYITAVAELLPSIL 86
YHL R DY ++R+++ V ELL + L
Sbjct: 901 YHLLRLYDYFYYREHLLIVCELLKANL 927
>At5g56050.1 68418.m06993 hypothetical protein
Length = 283
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 1/30 (3%)
Frame = +2
Query: 236 KTPHARWASPATVPWNMPP-SVALTEKLTP 322
+TP ++W SP PW P S T TP
Sbjct: 21 ETPSSKWYSPIYTPWRTTPRSTQSTPTTTP 50
>At1g61870.1 68414.m06981 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profile PF01535: PPR repeat
Length = 408
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/71 (23%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +1
Query: 169 TYENPCEFYCEKDKTHSNMTIVK---NTACEVGIPCYCTLEYAPVCGSNGKTYANKCSLE 339
TY + +C +D + K N C+ CY TL Y G + +T + C
Sbjct: 294 TYSHLIHGFCNEDDFEEAKKLFKIMVNRGCKPDSECYFTLIYYLCKGGDFETALSLCKES 353
Query: 340 CTQKIIPSLKM 372
+ +PS +
Sbjct: 354 MEKNWVPSFSI 364
>At1g55350.4 68414.m06326 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 592 CSNGFSFPPPTLCYYRKDRCVRCSSL 515
C GF PPT YR+D C L
Sbjct: 1192 CRKGFRHEPPTNVDYRRDMCAHARVL 1217
>At1g55350.3 68414.m06325 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 592 CSNGFSFPPPTLCYYRKDRCVRCSSL 515
C GF PPT YR+D C L
Sbjct: 1192 CRKGFRHEPPTNVDYRRDMCAHARVL 1217
>At1g55350.2 68414.m06324 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 592 CSNGFSFPPPTLCYYRKDRCVRCSSL 515
C GF PPT YR+D C L
Sbjct: 1192 CRKGFRHEPPTNVDYRRDMCAHARVL 1217
>At1g55350.1 68414.m06323 calpain-type cysteine protease family
identical to calpain-like protein GI:20268660 from
[Arabidopsis thaliana]; contains Pfam profiles: PF00648
Calpain family cysteine protease, PF01067 Calpain large
subunit,domain III; identical to cDNA calpain-like
protein GI:20268659
Length = 2151
Score = 27.5 bits (58), Expect = 7.7
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 592 CSNGFSFPPPTLCYYRKDRCVRCSSL 515
C GF PPT YR+D C L
Sbjct: 1192 CRKGFRHEPPTNVDYRRDMCAHARVL 1217
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,022,860
Number of Sequences: 28952
Number of extensions: 345677
Number of successful extensions: 892
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 892
length of database: 12,070,560
effective HSP length: 78
effective length of database: 9,812,304
effective search space used: 1265787216
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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