Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_B11
(592 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_01_0162 + 1845295-1846317,1846430-1846565,1848436-1848626,184... 38 0.008
12_02_0045 + 12824766-12825417,12826608-12826753,12826825-128269... 37 0.014
01_01_0136 + 1237623-1237820,1238313-1239001,1239978-1240308,124... 33 0.13
09_02_0240 - 6157855-6157891,6158040-6158329 33 0.17
11_06_0610 - 25449085-25453284 32 0.30
08_01_0455 + 4012857-4013735 31 0.69
07_03_1509 - 27246721-27247350 31 0.91
03_02_0232 + 6614784-6614882,6616145-6616477,6616708-6616967,661... 31 0.91
02_02_0236 + 8135641-8135795,8136167-8136557,8136640-8136931,813... 31 0.91
04_03_0235 - 13111282-13111878 30 1.2
02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688 29 2.1
06_02_0243 - 13433276-13434154,13434192-13434593,13434730-13434750 29 2.8
06_03_0089 - 16475677-16476309 29 3.7
03_05_0001 - 19386264-19386284,19386446-19386517,19386614-193873... 29 3.7
03_03_0261 + 15949984-15950427 29 3.7
02_02_0521 - 11156594-11156956,11157097-11157483,11158327-111583... 29 3.7
07_03_1564 + 27749899-27750166,27750431-27750507,27750923-277509... 28 4.8
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365... 28 4.8
04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,521... 28 4.8
10_07_0119 + 13042477-13042864,13044114-13044259,13046104-13046697 28 6.4
10_02_0099 - 5295513-5296400 28 6.4
09_04_0504 + 18180321-18181013 28 6.4
04_03_0799 - 19805190-19805749,19806316-19806403 28 6.4
03_06_0271 - 32773895-32774608 28 6.4
03_02_0021 - 5049705-5049713,5049744-5049770,5049877-5049940,505... 28 6.4
01_06_0775 - 31909855-31909897,31909984-31910055,31910400-319104... 28 6.4
05_07_0024 + 27125474-27125764 27 8.5
02_04_0115 - 19888252-19888406,19888507-19888573,19888867-198891... 27 8.5
>04_01_0162 +
1845295-1846317,1846430-1846565,1848436-1848626,
1848780-1848887,1849001-1849204,1849294-1849525,
1849602-1849751,1849830-1850007,1850416-1850519,
1850611-1850933,1851274-1851459,1851672-1851899
Length = 1020
Score = 37.5 bits (83), Expect = 0.008
Identities = 19/63 (30%), Positives = 26/63 (41%)
Frame = -1
Query: 244 ATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRPPTNNECATCRL 65
A +PPS T PP+ T P+ T PP+ AA PP+ A+ +
Sbjct: 114 AAPQPPSQGPFGTAPPPSQGPFGTAPPPSQGPFGTAPPPSQGPFAASVPPSQGPFASAQP 173
Query: 64 PAR 56
P R
Sbjct: 174 PFR 176
Score = 33.5 bits (73), Expect = 0.13
Identities = 16/56 (28%), Positives = 22/56 (39%)
Frame = -1
Query: 262 PTSIECATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRPP 95
P+ T PPS T PP+ T P+ A PP+ A+ +PP
Sbjct: 119 PSQGPFGTAPPPSQGPFGTAPPPSQGPFGTAPPPSQGPFAASVPPSQGPFASAQPP 174
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/57 (26%), Positives = 22/57 (38%)
Frame = -1
Query: 262 PTSIECATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRPPT 92
P+ T PPS T PP+ A P+ A+ +PP + + PT
Sbjct: 130 PSQGPFGTAPPPSQGPFGTAPPPSQGPFAASVPPSQGPFASAQPPFRPPPSLVQSPT 186
>12_02_0045 +
12824766-12825417,12826608-12826753,12826825-12826935,
12827854-12828441
Length = 498
Score = 36.7 bits (81), Expect = 0.014
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 12/73 (16%)
Frame = -1
Query: 247 CATC---RPPSSNECATC---RPPT--SNECATCRTPTSNECAT--CRPPTSNECAACRP 98
CATC P S C C RP + A +TPT +T R TS+ C A RP
Sbjct: 64 CATCTLDNPGHSRACDACGNSRPVEVDGDAVAKAQTPTLPTMSTPPARASTSSGCGAGRP 123
Query: 97 PTNNE--CATCRL 65
PT + CA C L
Sbjct: 124 PTERKWSCAACTL 136
>01_01_0136 +
1237623-1237820,1238313-1239001,1239978-1240308,
1240614-1241351
Length = 651
Score = 33.5 bits (73), Expect = 0.13
Identities = 17/54 (31%), Positives = 21/54 (38%), Gaps = 2/54 (3%)
Frame = -1
Query: 262 PTSIECATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRPP--TSNECAA 107
P +EC C P + C C+TC EC CR P T+ C A
Sbjct: 48 PEVLECDVCFGPLTPPLYQCMRRGHITCSTCVAEMGQECQWCRAPEATTTRCRA 101
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/52 (30%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = -1
Query: 229 PSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRPP--TNNEC 80
P EC C P + C C+TC EC CR P T C
Sbjct: 48 PEVLECDVCFGPLTPPLYQCMRRGHITCSTCVAEMGQECQWCRAPEATTTRC 99
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/53 (28%), Positives = 17/53 (32%)
Frame = -1
Query: 196 PTSNECATCRTPTSNECATCRPPTSNECAACRPPTNNECATCRLPARCKTHGR 38
P EC C P + C C+ C EC CR P T R
Sbjct: 48 PEVLECDVCFGPLTPPLYQCMRRGHITCSTCVAEMGQECQWCRAPEATTTRCR 100
>09_02_0240 - 6157855-6157891,6158040-6158329
Length = 108
Score = 33.1 bits (72), Expect = 0.17
Identities = 15/45 (33%), Positives = 20/45 (44%)
Frame = -1
Query: 214 CATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRPPTNNEC 80
CAT +SN TC N C++ T C CR +N +C
Sbjct: 36 CATACSSSSNGTVTCYNNAINTCSSNCSITPQYCDQCRRESNQQC 80
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = -1
Query: 247 CATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNEC 113
CAT SSN TC N C++ + T C CR ++ +C
Sbjct: 36 CATACSSSSNGTVTCYNNAINTCSSNCSITPQYCDQCRRESNQQC 80
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 32.3 bits (70), Expect = 0.30
Identities = 23/73 (31%), Positives = 29/73 (39%)
Frame = -1
Query: 262 PTSIECATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRPPTNNE 83
P + E T PP S A PPT A+ P + E T PP S + PPT
Sbjct: 597 PPTPEEYTPSPPKSTPPAEKSPPTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPES 656
Query: 82 CATCRLPARCKTH 44
A+ P + H
Sbjct: 657 KASSPPPPTPEGH 669
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/57 (33%), Positives = 23/57 (40%)
Frame = -1
Query: 262 PTSIECATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRPPT 92
P + E T PP S + PPT A+ P + E T PP S PPT
Sbjct: 630 PPAPEGHTPSPPESTPPSEKSPPTPESKASSPPPPTPEGHTPSPPKSTPPTEKSPPT 686
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/56 (32%), Positives = 23/56 (41%)
Frame = -1
Query: 262 PTSIECATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRPP 95
PT A+ PP + E T PP S + PT A+ PP + E PP
Sbjct: 619 PTPESKASSPPPPAPEGHTPSPPESTPPSEKSPPTPESKASSPPPPTPEGHTPSPP 674
>08_01_0455 + 4012857-4013735
Length = 292
Score = 31.1 bits (67), Expect = 0.69
Identities = 16/57 (28%), Positives = 20/57 (35%)
Frame = +2
Query: 86 VVRRWPAGCTLVARRWSAGCTLVTRRCPAGCTLVARRWSAGCTLVARRWSAGCTLDA 256
V+R GC + W++ C V P C V C W G LDA
Sbjct: 177 VLRHRAVGCFVTHSGWNSTCEGVAAGVPMVCWPVFADQYTNCKYACEAWGVGVRLDA 233
>07_03_1509 - 27246721-27247350
Length = 209
Score = 30.7 bits (66), Expect = 0.91
Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 1/59 (1%)
Frame = -1
Query: 265 IPT-SIECATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRPPT 92
+PT ++ CRP SS C R P A+ ++ C P A PP+
Sbjct: 64 LPTVALSLPRCRPASSRLCRLARAPAGRAVASSSVAATSSTPACPPSREVTPGATFPPS 122
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/56 (25%), Positives = 22/56 (39%)
Frame = -1
Query: 265 IPTSIECATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRP 98
+P S ++ P + CRP +S C R P A+ ++ AC P
Sbjct: 54 LPRSPVVSSHLPTVALSLPRCRPASSRLCRLARAPAGRAVASSSVAATSSTPACPP 109
>03_02_0232 +
6614784-6614882,6616145-6616477,6616708-6616967,
6617328-6617469,6617567-6617938,6618056-6618187,
6618907-6619035,6619125-6621188
Length = 1176
Score = 30.7 bits (66), Expect = 0.91
Identities = 16/51 (31%), Positives = 21/51 (41%)
Frame = -1
Query: 220 NECATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRPPTNNECATCR 68
N C+T R TS + TP S + A+ S C P T + CR
Sbjct: 545 NSCSTLRNSTSTNDESTNTPDSRDSASEEEDNSTVVDLCSPDTFVDQTACR 595
>02_02_0236 +
8135641-8135795,8136167-8136557,8136640-8136931,
8137117-8137271,8137363-8137451,8137623-8137967,
8139046-8139169,8139424-8139581,8139673-8139757,
8140094-8140306,8141314-8141375,8141466-8141951,
8142472-8142568
Length = 883
Score = 30.7 bits (66), Expect = 0.91
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -1
Query: 202 RPPTSNECATCRTPTSNECATCRPPTSNECAACR 101
RP A P +ECATC P C+ C+
Sbjct: 14 RPMPYMRSAPSARPEYHECATCHGPAKTRCSRCK 47
Score = 30.3 bits (65), Expect = 1.2
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -1
Query: 235 RPPSSNECATCRPPTSNECATCRTPTSNECATCR 134
RP A P +ECATC P C+ C+
Sbjct: 14 RPMPYMRSAPSARPEYHECATCHGPAKTRCSRCK 47
Score = 29.9 bits (64), Expect = 1.6
Identities = 9/22 (40%), Positives = 13/22 (59%)
Frame = -1
Query: 229 PSSNECATCRPPTSNECATCRT 164
P +ECATC P C+ C++
Sbjct: 27 PEYHECATCHGPAKTRCSRCKS 48
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/26 (34%), Positives = 12/26 (46%)
Frame = -1
Query: 130 PTSNECAACRPPTNNECATCRLPARC 53
P +ECA C P C+ C+ C
Sbjct: 27 PEYHECATCHGPAKTRCSRCKSVRYC 52
Score = 27.9 bits (59), Expect = 6.4
Identities = 9/21 (42%), Positives = 12/21 (57%)
Frame = -1
Query: 262 PTSIECATCRPPSSNECATCR 200
P ECATC P+ C+ C+
Sbjct: 27 PEYHECATCHGPAKTRCSRCK 47
>04_03_0235 - 13111282-13111878
Length = 198
Score = 30.3 bits (65), Expect = 1.2
Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 4/60 (6%)
Frame = -1
Query: 262 PTSIECATCR--PPSSNECATCR--PPTSNECATCRTPTSNECATCRPPTSNECAACRPP 95
P S+ CR PP + T R P + + +TPTS C PP S A C P
Sbjct: 79 PASLAARRCRHLPPLAAVITTNRRQPAVDHIWSPLQTPTSRSCHHPPPPPSFPAAGCCSP 138
>02_01_0227 - 1481511-1481831,1482083-1482469,1483470-1483688
Length = 308
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/50 (30%), Positives = 18/50 (36%), Gaps = 1/50 (2%)
Frame = -1
Query: 253 IECATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSN-ECAA 107
+EC C C P C+ C+ N C TCR N C A
Sbjct: 58 LECPVCTNSMRPPILQC-PNGHTICSNCKHRVENHCPTCRQELGNIRCLA 106
>06_02_0243 - 13433276-13434154,13434192-13434593,13434730-13434750
Length = 433
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/55 (29%), Positives = 23/55 (41%)
Frame = -2
Query: 273 VYKSLRASSVQPADHLRATSVQPADHLRATSVQPAGHLRVTSVQPADHLRATSVQ 109
+ + R SS DH + +DH+ A S+QPA L D AT +
Sbjct: 113 IANAARCSSSLDFDHPLPSDAASSDHISALSIQPAACLLFARFAKNDETTATKTK 167
>06_03_0089 - 16475677-16476309
Length = 210
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/69 (30%), Positives = 25/69 (36%), Gaps = 1/69 (1%)
Frame = -1
Query: 250 ECATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRP-PTSNECAACRPPTNNECAT 74
E AT P + A CRPP + C +P AT P P E P C
Sbjct: 70 EGATAAPAFTTGYARCRPPRPSICTRRNSP-----ATPPPDPEEEEVRHSSRPAAQRCQV 124
Query: 73 CRLPARCKT 47
+P C T
Sbjct: 125 PAVPYYCAT 133
>03_05_0001 -
19386264-19386284,19386446-19386517,19386614-19387357,
19387454-19388884,19388953-19389118,19392035-19392114,
19392393-19392462,19392550-19392761,19392837-19392890,
19393471-19393623,19393715-19393930,19394029-19394248,
19394332-19394399,19394510-19394643,19394755-19394854,
19394943-19395421,19395506-19395699,19396270-19396355,
19396364-19396444,19396842-19397023,19397305-19397346,
19398247-19398558,19399374-19399434,19399435-19399617,
19399744-19399863,19400380-19401051,19402597-19402668,
19402742-19402865,19403563-19403651,19405023-19405097
Length = 2170
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Frame = -1
Query: 202 RPPTSNECATCRTPTSNECATCRPPTSNECAAC-RPPTNNECATCRLPARCKTHG 41
R P ++ ++ PT+ C C P +S+ C PP+ N C C P+ HG
Sbjct: 518 RAPATHAYSSTSAPTTLLCP-CLPESSSGCGILPAPPSFNPC-RCDKPSSDVAHG 570
Score = 27.5 bits (58), Expect = 8.5
Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = -1
Query: 262 PTSIECATCRPPSSNECATC-RPPTSNECATCRTPTSN 152
PT++ C C P SS+ C PP+ N C C P+S+
Sbjct: 531 PTTLLCP-CLPESSSGCGILPAPPSFNPC-RCDKPSSD 566
>03_03_0261 + 15949984-15950427
Length = 147
Score = 28.7 bits (61), Expect = 3.7
Identities = 20/68 (29%), Positives = 24/68 (35%), Gaps = 5/68 (7%)
Frame = -1
Query: 250 ECATCRPPSSNECATCRPPTSNECATCRTPTSNECAT-----CRPPTSNECAACRPPTNN 86
EC P++ ECA C + A C P + A C EC P
Sbjct: 33 ECDAVVAPAAQECAVCLCELAG-AAGCSEPEAAAAAVRTLPGCGHGFHAECIGRWLPLRA 91
Query: 85 ECATCRLP 62
EC CR P
Sbjct: 92 ECPICRRP 99
>02_02_0521 -
11156594-11156956,11157097-11157483,11158327-11158383,
11159671-11159970
Length = 368
Score = 28.7 bits (61), Expect = 3.7
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 181 CATCRTPTSNECATCR 134
C+TC+T N C TCR
Sbjct: 127 CSTCKTRVHNRCPTCR 142
>07_03_1564 +
27749899-27750166,27750431-27750507,27750923-27750950,
27751117-27751261,27751351-27751429,27751515-27751633,
27751732-27752073,27754807-27754896,27755730-27755955,
27756398-27756784,27757176-27757496
Length = 693
Score = 28.3 bits (60), Expect = 4.8
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = -1
Query: 115 CAACRPPTNNECATCR 68
C+ C+P +N C TCR
Sbjct: 466 CSGCKPRVHNRCPTCR 481
Score = 27.5 bits (58), Expect = 8.5
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = -1
Query: 214 CATCRPPTSNECATCRTPTSN 152
C+ C+P N C TCR N
Sbjct: 466 CSGCKPRVHNRCPTCRHELGN 486
>05_01_0004 -
34967-35149,35340-35501,36078-36225,36309-36385,
36507-36577,36850-37263,37518-38268
Length = 601
Score = 28.3 bits (60), Expect = 4.8
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = -1
Query: 232 PPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRPPTNNECATCRLPARC 53
PP N + +PP+ ++P T PPT+ AA PPT + P
Sbjct: 84 PPPRNSPSPPKPPSQ----AAQSPLPPTTTTTTPPTAPVPAAAPPPTAPSPYSAPSPTPT 139
Query: 52 KTH 44
TH
Sbjct: 140 PTH 142
>04_01_0399 - 5214183-5214206,5215437-5215502,5219537-5219635,
5219746-5219817,5219918-5220491,5220575-5220687,
5220842-5220941,5221059-5221181,5221268-5221335,
5221461-5221610,5221715-5221858,5222097-5222288,
5222710-5222794,5222892-5223043,5223138-5223296,
5223552-5223605,5223698-5223836,5223955-5224088,
5224200-5225117
Length = 1121
Score = 28.3 bits (60), Expect = 4.8
Identities = 22/74 (29%), Positives = 33/74 (44%), Gaps = 12/74 (16%)
Frame = -1
Query: 250 ECATCRPPSSNE--CATCRPPTSNEC--ATCRTPTSNECATCRPP-TSNEC----AACR- 101
EC C +S++ C EC ++ RTP+ C CR P T +E + CR
Sbjct: 895 ECPICLESASDDPVLTPCAHRMCRECLLSSWRTPSGGPCPLCRSPITKSELITLPSQCRF 954
Query: 100 --PPTNNECATCRL 65
P NN +C++
Sbjct: 955 QVDPENNWKDSCKV 968
>10_07_0119 + 13042477-13042864,13044114-13044259,13046104-13046697
Length = 375
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/65 (26%), Positives = 23/65 (35%), Gaps = 3/65 (4%)
Frame = -1
Query: 256 SIECATCRPPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNECAAC---RPPTNN 86
S+ A PP A + CA C + C +C P CA C P +
Sbjct: 3 SLSPAAAPPPPPAAAAAEASWECDPCA-CAATAGSPCGSCGAPPPWACARCTLLNPSGSG 61
Query: 85 ECATC 71
C+ C
Sbjct: 62 VCSAC 66
>10_02_0099 - 5295513-5296400
Length = 295
Score = 27.9 bits (59), Expect = 6.4
Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = -2
Query: 201 DHLRATSVQPAGHLRVTSVQPA-DHLRATSVQPAGHLRTTSVQP 73
+HL +S +P + S A DH + + AGH++T + P
Sbjct: 164 EHLSRSSSKPPTPTKTASAPAAADHAKKANTAAAGHVKTPAAAP 207
Score = 27.5 bits (58), Expect = 8.5
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = -2
Query: 258 RASSVQPADHLRATSVQPADHLRATSVQPAGHLRVTSVQP 139
R+SS P A++ ADH + + AGH++ + P
Sbjct: 168 RSSSKPPTPTKTASAPAAADHAKKANTAAAGHVKTPAAAP 207
>09_04_0504 + 18180321-18181013
Length = 230
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/46 (30%), Positives = 18/46 (39%)
Frame = -1
Query: 232 PPSSNECATCRPPTSNECATCRTPTSNECATCRPPTSNECAACRPP 95
PP PPT+ + A PT+ E T + P AA P
Sbjct: 132 PPPPQPVPAPPPPTTADAADVAAPTAPEATTKKAPEDLTAAAATQP 177
>04_03_0799 - 19805190-19805749,19806316-19806403
Length = 215
Score = 27.9 bits (59), Expect = 6.4
Identities = 18/65 (27%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Frame = -1
Query: 238 CRPPSSNECATCRP----PTSNECATCRTPTSNECATCRPPTSNEC-AACRPPTNNEC-A 77
C PPS+++C C P P C C C P + C C C A
Sbjct: 114 CCPPSTHQCYHCCPAPPKPKPKPC-ECTHHCGGHGGGCNKPAVSPCGGGCSISDGGACGA 172
Query: 76 TCRLP 62
+C+ P
Sbjct: 173 SCKPP 177
>03_06_0271 - 32773895-32774608
Length = 237
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/44 (34%), Positives = 19/44 (43%)
Frame = -1
Query: 265 IPTSIECATCRPPSSNECATCRPPTSNECATCRTPTSNECATCR 134
+ +S A SS+ AT P +N CATCR CR
Sbjct: 149 VASSAAAAADASYSSSSPATGEQPEANRCATCRRKVGLTGFKCR 192
>03_02_0021 -
5049705-5049713,5049744-5049770,5049877-5049940,
5050019-5050806,5050888-5051046,5051778-5052419
Length = 562
Score = 27.9 bits (59), Expect = 6.4
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -1
Query: 250 ECATCRPPSSNECATCRPPTS---NECATC 170
+C CR C T +PP S +EC++C
Sbjct: 6 QCPYCRASGPARCVTTQPPLSRAVSECSSC 35
Score = 27.5 bits (58), Expect = 8.5
Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)
Frame = -1
Query: 184 ECATCRTPTSNECATCRPPTS---NECAAC 104
+C CR C T +PP S +EC++C
Sbjct: 6 QCPYCRASGPARCVTTQPPLSRAVSECSSC 35
>01_06_0775 -
31909855-31909897,31909984-31910055,31910400-31910488,
31911298-31911522
Length = 142
Score = 27.9 bits (59), Expect = 6.4
Identities = 22/79 (27%), Positives = 33/79 (41%), Gaps = 1/79 (1%)
Frame = +2
Query: 158 RRCPAGCTLVARRWSAGCTLVARRWSAGCTLDARRDL-YTSLRLI*NNVI*VSMYVYVCT 334
RR T+ AR W+ + RR + LDA D+ Y S + ++ +
Sbjct: 49 RRTRTCATMAARPWTWTLRRMQRRVARCLALDAHGDIFYDSGDELPRQCEEETVLTWTVR 108
Query: 335 RVRPRAVATSFLVITGLLL 391
R+R AV FL GL +
Sbjct: 109 RIRKMAVMALFLTYNGLTI 127
>05_07_0024 + 27125474-27125764
Length = 96
Score = 27.5 bits (58), Expect = 8.5
Identities = 20/68 (29%), Positives = 26/68 (38%), Gaps = 5/68 (7%)
Frame = -1
Query: 250 ECATCRPPSSNECATC----RPPTSNECATCRT-PTSNECATCRPPTSNECAACRPPTNN 86
E ATC P CA PPT+ C + P S C + P + P
Sbjct: 26 EAATCTPTQLTPCAPAIVGNSPPTAACCGKLKAHPASCFCQYKKDPNMKKYVN-SPNGKK 84
Query: 85 ECATCRLP 62
ATC++P
Sbjct: 85 VFATCKVP 92
>02_04_0115 -
19888252-19888406,19888507-19888573,19888867-19889101,
19889179-19889255,19889350-19889415,19889517-19889565,
19889651-19889701,19889799-19889851,19889973-19890024,
19890126-19890214,19890308-19890393,19890603-19890659,
19890742-19890919,19891852-19891908,19892209-19892439
Length = 500
Score = 27.5 bits (58), Expect = 8.5
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = -1
Query: 232 PPSSNECATCRPPTSNECATCRTPTSNECATCRPPT 125
P S T + T N A +TPTSN + PPT
Sbjct: 128 PVSGKAVKTSKSKTKNNKAGPQTPTSNVGSPLNPPT 163
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,524,451
Number of Sequences: 37544
Number of extensions: 396879
Number of successful extensions: 1456
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1014
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1389
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1400060088
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -