Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B11
         (592 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    22   3.9  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   6.8  
AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced prot...    21   9.0  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    21   9.0  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/16 (43%), Positives = 8/16 (50%)
 Frame = -1

Query: 100 PPTNNECATCRLPARC 53
           PP   EC TC    +C
Sbjct: 431 PPIGCECKTCNSKTKC 446



 Score = 21.0 bits (42), Expect = 9.0
 Identities = 7/14 (50%), Positives = 8/14 (57%)
 Frame = -1

Query: 199 PPTSNECATCRTPT 158
           PP   EC TC + T
Sbjct: 431 PPIGCECKTCNSKT 444


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 11/43 (25%), Positives = 21/43 (48%)
 Frame = -3

Query: 140 LQTTYEQRVCSLQATYEQRVCNLQATCSLQDTREIPCDYSDIN 12
           +Q  +EQ         +  VC+ Q   SLQ   + P +++D++
Sbjct: 559 VQAAFEQNTTDQSMDID--VCDNQTYTSLQMAMKNPIEFTDLS 599


>AB264335-1|BAF44090.1|   87|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 87

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 136 RPPTSNECAACRPPTNNECATCRL 65
           RP T N+  +      N C  CRL
Sbjct: 53  RPCTKNQQCSILRINRNRCQYCRL 76


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 21.0 bits (42), Expect = 9.0
 Identities = 9/24 (37%), Positives = 11/24 (45%)
 Frame = -1

Query: 136 RPPTSNECAACRPPTNNECATCRL 65
           RP T N+  +      N C  CRL
Sbjct: 102 RPCTKNQQCSILRINRNRCQYCRL 125


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 182,392
Number of Sequences: 438
Number of extensions: 4656
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)