Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_B09
(383 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16789| Best HMM Match : No HMM Matches (HMM E-Value=.) 108 1e-24
SB_23893| Best HMM Match : rve (HMM E-Value=3.1e-24) 29 0.98
SB_46018| Best HMM Match : I-set (HMM E-Value=0.025) 28 2.3
SB_42460| Best HMM Match : Peptidase_C16 (HMM E-Value=4.7) 27 4.0
SB_31197| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 4.0
SB_7377| Best HMM Match : ELO (HMM E-Value=3.6e-06) 27 5.2
SB_31710| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_29755| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 6.9
SB_59022| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.4e-13) 26 9.2
SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39) 26 9.2
SB_49359| Best HMM Match : rve (HMM E-Value=5.5e-37) 26 9.2
SB_49072| Best HMM Match : rve (HMM E-Value=2.7e-29) 26 9.2
SB_48278| Best HMM Match : rve (HMM E-Value=7.1e-28) 26 9.2
SB_47964| Best HMM Match : Abi_HHR (HMM E-Value=5) 26 9.2
SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38) 26 9.2
SB_11123| Best HMM Match : RVT_1 (HMM E-Value=3.4e-27) 26 9.2
SB_51971| Best HMM Match : rve (HMM E-Value=7.7e-31) 26 9.2
SB_44757| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_33948| Best HMM Match : rve (HMM E-Value=2.8e-29) 26 9.2
SB_29756| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39) 26 9.2
SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13) 26 9.2
SB_3942| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.2
>SB_16789| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 457
Score = 108 bits (260), Expect = 1e-24
Identities = 48/76 (63%), Positives = 60/76 (78%), Gaps = 1/76 (1%)
Frame = +3
Query: 21 EGLMKYIEDKKRPKTGKA-YGARYVGSMVADVHRTIKYGGIFMYPATKSAPNGKLRLLYE 197
E + KY+E K PK GK Y ARYVGSMV+D+HRT+ YGGIFMYP + AP GKLRLLYE
Sbjct: 219 EPMKKYMEKLKTPKDGKGPYAARYVGSMVSDLHRTLIYGGIFMYPGSTKAPEGKLRLLYE 278
Query: 198 CXPMAFIVTEAGGVAT 245
C PMA+++ +AGG+A+
Sbjct: 279 CNPMAYVIEQAGGMAS 294
Score = 42.7 bits (96), Expect = 1e-04
Identities = 17/30 (56%), Positives = 24/30 (80%)
Frame = +1
Query: 247 NGKIPILDIQPTAIHQRAPCYLGSKNDVAE 336
+G PILDI PT++HQRAP ++GS +DV +
Sbjct: 295 DGNQPILDIVPTSLHQRAPIFIGSADDVKD 324
>SB_23893| Best HMM Match : rve (HMM E-Value=3.1e-24)
Length = 553
Score = 29.5 bits (63), Expect = 0.98
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSLH 168
R+ + A S LWWP + +V C QS+H
Sbjct: 212 RMKSLARSYLWWPKLDQAIENMVHHCEACQSVH 244
>SB_46018| Best HMM Match : I-set (HMM E-Value=0.025)
Length = 1122
Score = 28.3 bits (60), Expect = 2.3
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Frame = +3
Query: 3 SCR-IRHEGLMKYIEDKKRPKTGKAYGARYV 92
SCR +R L++ I K+PKT K YGAR +
Sbjct: 854 SCRRLRPRSLLRQIGQSKKPKTQK-YGARSI 883
>SB_42460| Best HMM Match : Peptidase_C16 (HMM E-Value=4.7)
Length = 786
Score = 27.5 bits (58), Expect = 4.0
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +3
Query: 198 CXPMAFIVTEAGGVATQWKDTHSRHTTDCHTST 296
C +++ VT G + TH + DCHT T
Sbjct: 71 CGDISYTVTHGYGDINSYTVTHDQADIDCHTIT 103
>SB_31197| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 469
Score = 27.5 bits (58), Expect = 4.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 258 THSRHTTDCHTSTC 299
T+S HTTDCH + C
Sbjct: 271 TNSCHTTDCHATNC 284
Score = 27.5 bits (58), Expect = 4.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 258 THSRHTTDCHTSTC 299
T+S HTTDCH + C
Sbjct: 302 TNSCHTTDCHVTNC 315
Score = 27.5 bits (58), Expect = 4.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 258 THSRHTTDCHTSTC 299
T+S HTTDCH + C
Sbjct: 323 TNSCHTTDCHVTNC 336
Score = 27.5 bits (58), Expect = 4.0
Identities = 9/14 (64%), Positives = 11/14 (78%)
Frame = +3
Query: 258 THSRHTTDCHTSTC 299
T+S HTTDCH + C
Sbjct: 355 TNSCHTTDCHATNC 368
>SB_7377| Best HMM Match : ELO (HMM E-Value=3.6e-06)
Length = 255
Score = 27.1 bits (57), Expect = 5.2
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -2
Query: 337 ILRRRS*TRGSKAHVDVWQSVVCLEWVSFHWVA 239
ILR+++ + S HV S+VCL WV WVA
Sbjct: 89 ILRKKN-NQISFLHVYHHFSMVCLWWVGIKWVA 120
>SB_31710| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 488
Score = 26.6 bits (56), Expect = 6.9
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 1/46 (2%)
Frame = +3
Query: 150 PATKSAPNGKLRLLYECXPMAFIVTEAGGVATQWKDT-HSRHTTDC 284
P + GK+R + C P + G + W+D H+ T C
Sbjct: 287 PIKQDVKKGKVRFVNHCFPYHGYIWNYGALPQTWEDPGHTDAATGC 332
>SB_29755| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 585
Score = 26.6 bits (56), Expect = 6.9
Identities = 10/36 (27%), Positives = 20/36 (55%)
Frame = -2
Query: 277 VVCLEWVSFHWVATPPASVTMNAIGLHSYSSRNFPL 170
V+C W + + + P + +T+ A+ L Y + + PL
Sbjct: 330 VMCRVWTTVYLMTVPTSILTLLAVSLDRYKTLSDPL 365
>SB_59022| Best HMM Match : Pkinase_Tyr (HMM E-Value=2.4e-13)
Length = 751
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/23 (39%), Positives = 14/23 (60%)
Frame = +2
Query: 101 GGRRTQNHQVWWYFYVPRYKVCT 169
G + + +VWW F V Y++CT
Sbjct: 695 GMQYLSSQKVWWSFGVVLYEICT 717
>SB_49539| Best HMM Match : RVT_1 (HMM E-Value=1.8e-39)
Length = 1311
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSL 165
R+ + A S LWWP + +V C QS+
Sbjct: 805 RMKSLARSYLWWPKLDQAIENMVHNCEACQSV 836
>SB_49359| Best HMM Match : rve (HMM E-Value=5.5e-37)
Length = 971
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/30 (33%), Positives = 13/30 (43%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQ 159
R +R S LWWP + + C P Q
Sbjct: 662 RTKSRLQSKLWWPQMDAQAEQFIKACYPCQ 691
>SB_49072| Best HMM Match : rve (HMM E-Value=2.7e-29)
Length = 307
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSL 165
R+ + A S LWWP + +V C QS+
Sbjct: 75 RMKSLARSYLWWPKLDQAIENMVHHCEACQSV 106
>SB_48278| Best HMM Match : rve (HMM E-Value=7.1e-28)
Length = 307
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSL 165
R+ + A S LWWP + +V C QS+
Sbjct: 75 RMKSLARSYLWWPKLDQAIENMVHHCEACQSV 106
>SB_47964| Best HMM Match : Abi_HHR (HMM E-Value=5)
Length = 275
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSL 165
R+ + A S LWWP + +V C QS+
Sbjct: 150 RMKSLARSYLWWPKLDQAIENMVHHCEACQSV 181
>SB_47416| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1413
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSL 165
R+ + A S LWWP + +V C QS+
Sbjct: 911 RMKSLARSYLWWPKLDQAIENMVHHCEACQSV 942
>SB_44967| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1284
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSL 165
R+ + A S LWWP + +V C QS+
Sbjct: 956 RMKSLARSYLWWPKLDQAIENMVHNCEACQSV 987
>SB_25140| Best HMM Match : RVT_1 (HMM E-Value=7.8e-38)
Length = 1425
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSL 165
R+ + A S LWWP + +V C QS+
Sbjct: 291 RMKSLARSYLWWPKLDQAIENMVHNCEACQSV 322
>SB_11123| Best HMM Match : RVT_1 (HMM E-Value=3.4e-27)
Length = 1154
Score = 26.2 bits (55), Expect = 9.2
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSLHL 171
++ A A S +WWPT + +V P + +H+
Sbjct: 716 QMKALARSYVWWPTIEKEIESMVKTYQPWRRIHI 749
>SB_51971| Best HMM Match : rve (HMM E-Value=7.7e-31)
Length = 488
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSL 165
R+ + A S LWWP + +V C QS+
Sbjct: 118 RMKSLARSYLWWPKLDQAIENMVHHCEACQSV 149
>SB_44757| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSL 165
R+ + A S LWWP + +V C QS+
Sbjct: 672 RMKSLARSYLWWPKLDQAIENMVHNCEACQSV 703
>SB_33948| Best HMM Match : rve (HMM E-Value=2.8e-29)
Length = 361
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSL 165
R+ + A S LWWP + +V C QS+
Sbjct: 129 RMKSLARSYLWWPKLDQAIENMVHHCEACQSV 160
>SB_29756| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 428
Score = 26.2 bits (55), Expect = 9.2
Identities = 9/36 (25%), Positives = 20/36 (55%)
Frame = -2
Query: 277 VVCLEWVSFHWVATPPASVTMNAIGLHSYSSRNFPL 170
V+C W + + +A P + +T+ A+ + + + PL
Sbjct: 118 VICDIWATMYLIAVPTSILTLLAVAVERFKTLKDPL 153
>SB_28642| Best HMM Match : RVT_1 (HMM E-Value=8.4e-39)
Length = 1750
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSL 165
R+ + A S LWWP + +V C QS+
Sbjct: 928 RMKSLARSYLWWPKLDQAIENMVHNCEACQSV 959
>SB_21165| Best HMM Match : LRR_1 (HMM E-Value=6.5e-13)
Length = 1383
Score = 26.2 bits (55), Expect = 9.2
Identities = 20/53 (37%), Positives = 23/53 (43%), Gaps = 3/53 (5%)
Frame = +3
Query: 132 GGIFMYPAT--KSAPNGKLRLLYECXPMAFIVTEAGGVATQWKDTH-SRHTTD 281
G + PAT S P G+ L Y P FIV G + KD H H TD
Sbjct: 1161 GTLIGKPATCSPSPPPGEDFLEYHFCPKLFIVLPVGFQSVALKDLHVMSHVTD 1213
>SB_3942| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 26.2 bits (55), Expect = 9.2
Identities = 13/49 (26%), Positives = 20/49 (40%)
Frame = +1
Query: 37 T*KIKSDRKLERLTARAMSVLWWPTYTEPSSMVVFLCTPLQSLHLMESY 183
T K K D E+++ +WW Y E M LC + + + Y
Sbjct: 116 TYKFKHDWLFEKVSFDLNVGVWWLVYVEGEGMYCLLCRKHKQITEVNQY 164
>SB_2074| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1266
Score = 26.2 bits (55), Expect = 9.2
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +1
Query: 70 RLTARAMSVLWWPTYTEPSSMVVFLCTPLQSL 165
R+ + A S LWWP + +V C QS+
Sbjct: 1149 RMKSLARSYLWWPKLDQAIENMVHHCEACQSV 1180
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,746,158
Number of Sequences: 59808
Number of extensions: 271981
Number of successful extensions: 2637
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 2576
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2637
length of database: 16,821,457
effective HSP length: 74
effective length of database: 12,395,665
effective search space used: 656970245
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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