Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I10A02NGRL0003_B09
         (383 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       24   2.2  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   3.8  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   3.8  
AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse t...    22   6.7  
AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    22   6.7  

>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 23.8 bits (49), Expect = 2.2
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = +3

Query: 6   CRIRHEGLMKYIEDKKRPKTGKAYGAR 86
           C   HE L  Y    ++P TG + G +
Sbjct: 56  CTTEHEQLPLYCSQNQKPNTGDSGGPK 82


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 158 CSGVHKNTTILDGSVY 111
           CSG+  +TT + GSV+
Sbjct: 392 CSGISGSTTAIGGSVF 407


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 3.8
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -1

Query: 158 CSGVHKNTTILDGSVY 111
           CSG+  +TT + GSV+
Sbjct: 392 CSGISGSTTAIGGSVF 407


>AJ970243-1|CAI96715.1|  129|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 129

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 1/45 (2%)
 Frame = -2

Query: 271 CLEWVSFHWVAT-PPASVTMNAIGLHSYSSRNFPLGADFVAGYIK 140
           C  ++S H     P  SVT N +   S     F  GA   A Y+K
Sbjct: 27  CRSYISTHQHGFFPRRSVTTNLVKFVSNCHAAFTSGAQMDAVYLK 71


>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 22.2 bits (45), Expect = 6.7
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +3

Query: 54  RPKTGKAYGARYVGSMVADVHR 119
           R   G+A+  RY   ++ DV+R
Sbjct: 277 RSSDGRAFSCRYPNQVMKDVNR 298


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 432,256
Number of Sequences: 2352
Number of extensions: 9140
Number of successful extensions: 26
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 29501847
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)