Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I10A02NGRL0003_B09
(383 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ271466-1|CAB69047.1| 341|Caenorhabditis elegans fructose-1,6-... 113 5e-26
AC006670-1|AAF39910.1| 341|Caenorhabditis elegans Fructose-1,6-... 113 5e-26
Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical pr... 27 4.5
Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical pr... 27 4.5
AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin pr... 27 4.5
AC006708-16|AAF60431.2| 312|Caenorhabditis elegans Hypothetical... 27 6.0
L14745-11|AAA27919.2| 315|Caenorhabditis elegans Hypothetical p... 26 7.9
>AJ271466-1|CAB69047.1| 341|Caenorhabditis elegans
fructose-1,6-bisphosphatase protein.
Length = 341
Score = 113 bits (271), Expect = 5e-26
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 EGLMKYIEDKKRPKTGK-AYGARYVGSMVADVHRTIKYGGIFMYPATKSAPNGKLRLLYE 197
+G +YI +K P+ GK A G RYVGSMVADVHRTI GGIF+YP T SAPNGKLRLLYE
Sbjct: 226 KGFAEYIRTRKYPEAGKKAMGQRYVGSMVADVHRTILNGGIFLYPPTVSAPNGKLRLLYE 285
Query: 198 CXPMAFIVTEAGGVATQWKD 257
C PMA+I+ +AGG+AT K+
Sbjct: 286 CNPMAYIIEQAGGLATTGKE 305
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = +1
Query: 250 GKIPILDIQPTAIHQRAPCYLGSKNDVAE 336
GK ILDIQPT IHQRAP LGSK DV E
Sbjct: 303 GKERILDIQPTQIHQRAPIILGSKLDVEE 331
>AC006670-1|AAF39910.1| 341|Caenorhabditis elegans
Fructose-1,6-biphosphatase protein1 protein.
Length = 341
Score = 113 bits (271), Expect = 5e-26
Identities = 53/80 (66%), Positives = 63/80 (78%), Gaps = 1/80 (1%)
Frame = +3
Query: 21 EGLMKYIEDKKRPKTGK-AYGARYVGSMVADVHRTIKYGGIFMYPATKSAPNGKLRLLYE 197
+G +YI +K P+ GK A G RYVGSMVADVHRTI GGIF+YP T SAPNGKLRLLYE
Sbjct: 226 KGFAEYIRTRKYPEAGKKAMGQRYVGSMVADVHRTILNGGIFLYPPTVSAPNGKLRLLYE 285
Query: 198 CXPMAFIVTEAGGVATQWKD 257
C PMA+I+ +AGG+AT K+
Sbjct: 286 CNPMAYIIEQAGGLATTGKE 305
Score = 44.8 bits (101), Expect = 2e-05
Identities = 22/29 (75%), Positives = 22/29 (75%)
Frame = +1
Query: 250 GKIPILDIQPTAIHQRAPCYLGSKNDVAE 336
GK ILDIQPT IHQRAP LGSK DV E
Sbjct: 303 GKERILDIQPTQIHQRAPIILGSKLDVEE 331
>Z47070-8|CAA87345.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 30 MKYIEDKKRPKTGKAYGARYV--GSMVADVHRTIKYGGIFMYPATKSAPNGKLRLLYECX 203
+ ++ + R +TG G RYV G M+ + GI++ AT A + + E
Sbjct: 4075 VSWLRNGNRVETG-VQGVRYVTDGRMLTIIEARSLDSGIYLCSATNEAGSAQQAYTLEVL 4133
Query: 204 PMAFIVTEAGGVAT 245
I+T GV T
Sbjct: 4134 VSPKIITSTPGVLT 4147
>Z47070-7|CAA87344.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 30 MKYIEDKKRPKTGKAYGARYV--GSMVADVHRTIKYGGIFMYPATKSAPNGKLRLLYECX 203
+ ++ + R +TG G RYV G M+ + GI++ AT A + + E
Sbjct: 4075 VSWLRNGNRVETG-VQGVRYVTDGRMLTIIEARSLDSGIYLCSATNEAGSAQQAYTLEVL 4133
Query: 204 PMAFIVTEAGGVAT 245
I+T GV T
Sbjct: 4134 VSPKIITSTPGVLT 4147
>Z47068-9|CAA87336.1| 5198|Caenorhabditis elegans Hypothetical protein
F15G9.4b protein.
Length = 5198
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 30 MKYIEDKKRPKTGKAYGARYV--GSMVADVHRTIKYGGIFMYPATKSAPNGKLRLLYECX 203
+ ++ + R +TG G RYV G M+ + GI++ AT A + + E
Sbjct: 4075 VSWLRNGNRVETG-VQGVRYVTDGRMLTIIEARSLDSGIYLCSATNEAGSAQQAYTLEVL 4133
Query: 204 PMAFIVTEAGGVAT 245
I+T GV T
Sbjct: 4134 VSPKIITSTPGVLT 4147
>Z47068-8|CAA87335.1| 5175|Caenorhabditis elegans Hypothetical protein
F15G9.4a protein.
Length = 5175
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 30 MKYIEDKKRPKTGKAYGARYV--GSMVADVHRTIKYGGIFMYPATKSAPNGKLRLLYECX 203
+ ++ + R +TG G RYV G M+ + GI++ AT A + + E
Sbjct: 4075 VSWLRNGNRVETG-VQGVRYVTDGRMLTIIEARSLDSGIYLCSATNEAGSAQQAYTLEVL 4133
Query: 204 PMAFIVTEAGGVAT 245
I+T GV T
Sbjct: 4134 VSPKIITSTPGVLT 4147
>AF074901-1|AAC26792.1| 5198|Caenorhabditis elegans hemicentin
precursor protein.
Length = 5198
Score = 27.1 bits (57), Expect = 4.5
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 2/74 (2%)
Frame = +3
Query: 30 MKYIEDKKRPKTGKAYGARYV--GSMVADVHRTIKYGGIFMYPATKSAPNGKLRLLYECX 203
+ ++ + R +TG G RYV G M+ + GI++ AT A + + E
Sbjct: 4075 VSWLRNGNRVETG-VQGVRYVTDGRMLTIIEARSLDSGIYLCSATNEAGSAQQAYTLEVL 4133
Query: 204 PMAFIVTEAGGVAT 245
I+T GV T
Sbjct: 4134 VSPKIITSTPGVLT 4147
>AC006708-16|AAF60431.2| 312|Caenorhabditis elegans Hypothetical
protein Y110A7A.7 protein.
Length = 312
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = -1
Query: 161 LCSGVHKNTTILDGSVYVGHHRTD 90
LCS H+ I D Y GHH +D
Sbjct: 268 LCSNTHRYFDINDHLFYFGHHVSD 291
>L14745-11|AAA27919.2| 315|Caenorhabditis elegans Hypothetical
protein C02F5.4 protein.
Length = 315
Score = 26.2 bits (55), Expect = 7.9
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 108 DVHRTIKYGGIFMYPATKSAPNGKLRLLYECXPMAFIVTEA 230
+VH+ +K G F PA + +GK+ P F+V EA
Sbjct: 129 EVHQQVKLSGSFPTPAVANKEHGKV-----AQPSQFVVEEA 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,197,597
Number of Sequences: 27780
Number of extensions: 185128
Number of successful extensions: 490
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 484
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 490
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 566277334
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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